Difference between revisions of "NONHSAT038042"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GAATGGTTGTCAAATCCTTTCTACCTCCTTATTCAGAGAAGGAAGGATCTTCTCATGCACAGAGGCAACAAATGGCAACTTTCTGAgtcctcatctataaaatgagcataataacatcacctacttaattggatttggtgaggattcactgggtgagttcatgcaaagcgctgagaacaggaccccccgcccccGTTAGCATTGTCAGCTGCTTCTTGAACACAGGTGAAGATGGTCACCTCTCTATGGCGGCCTCAGCTCTTACCCGTACATCAAGACTATTCTAGCAACCAATTGGGAGCTTGAGTGCCCATTTTAAATTCTCAAAGGATAAAGAGCCTGATTGGCCCAAATTGTCTCAGGTGTCTCTCTACTCCTTGTCTAATCAGCCATGGTGAGACAGGTA</dnaseq>| | sequence = <dnaseq>GAATGGTTGTCAAATCCTTTCTACCTCCTTATTCAGAGAAGGAAGGATCTTCTCATGCACAGAGGCAACAAATGGCAACTTTCTGAgtcctcatctataaaatgagcataataacatcacctacttaattggatttggtgaggattcactgggtgagttcatgcaaagcgctgagaacaggaccccccgcccccGTTAGCATTGTCAGCTGCTTCTTGAACACAGGTGAAGATGGTCACCTCTCTATGGCGGCCTCAGCTCTTACCCGTACATCAAGACTATTCTAGCAACCAATTGGGAGCTTGAGTGCCCATTTTAAATTCTCAAAGGATAAAGAGCCTGATTGGCCCAAATTGTCTCAGGTGTCTCTCTACTCCTTGTCTAATCAGCCATGGTGAGACAGGTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG015587]] |
Revision as of 12:02, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT038042 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
406 nt |
| Genomic location |
chr14-:81411900..81425861 |
| Exon number |
3 |
| Exons |
81411900..81412111,81424522..81424629,81425776..81425861 |
| Genome context |
|
| Sequence |
000001 GAATGGTTGT CAAATCCTTT CTACCTCCTT ATTCAGAGAA GGAAGGATCT TCTCATGCAC AGAGGCAACA AATGGCAACT 000080
000081 TTCTGAgtcc tcatctataa aatgagcata ataacatcac ctacttaatt ggatttggtg aggattcact gggtgagttc 000160 000161 atgcaaagcg ctgagaacag gaccccccgc ccccGTTAGC ATTGTCAGCT GCTTCTTGAA CACAGGTGAA GATGGTCACC 000240 000241 TCTCTATGGC GGCCTCAGCT CTTACCCGTA CATCAAGACT ATTCTAGCAA CCAATTGGGA GCTTGAGTGC CCATTTTAAA 000320 000321 TTCTCAAAGG ATAAAGAGCC TGATTGGCCC AAATTGTCTC AGGTGTCTCT CTACTCCTTG TCTAATCAGC CATGGTGAGA 000400 000401 CAGGTA |
Predicted Small Protein
| Name | NONHSAT038042_smProtein_2:85 |
| Length | 28 |
| Molecular weight | 3084.4835 |
| Aromaticity | 0.111111111111 |
| Instability index | 60.5037037037 |
| Isoelectric point | 8.27545166016 |
| Runs | 5 |
| Runs residual | 0.0214707461084 |
| Runs probability | 0.0182653241477 |
| Amino acid sequence | MVVKSFLPPYSEKEGSSHAQRQQMATF |
| Secondary structure | LEELLLLLLLLLLLLLLHHHHHHHHLL |
| PRMN | - |
| PiMo | - |
