Difference between revisions of "NONHSAT049647"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CTGCTAATAGACTAATAGAAGCATCTTTGTTGCAGCCAATCACCTCTAGCCTGGGAACACCGCTAGTCAGGAGGCCTCAATCAACCTGAGAAGTCAGCCCAAGGCCCTGTCTCCAGAAGCCAGCAGCAGATCCCTGGGTCATGTCACAGGCAAGTCCTCACTTCACCAGCTCAGAGGATGACACTGGGTTACAACCATCCCACACGAGGAGAGTGACATGTCCCAACTTGCTTCTGGCCCATGTTTTACAAGAAGCTTGTCCGGCAGGCAAAATAGCCCTCAACACAGGAACACCTGTTGCAGCACCTGTCAGTAGCGTCTGGCACCCTGGCAGCTGACGTCTCAGTGCAGCCGGCAAGGACACTCTGGGAAGAGGACGCAGTGGCCTTATGAGTGAACGACGGAGAAGCCGGAGGGAGGAGGCCTGGCCTGTCTGCCTTGGAAGCTAATGATGCCCATTGTTTCTATACCCACCGCCCAGGCAGCTGTCCATCTGCCGATGCTCCTAACAGTTCGCCCTCAGAAGACCACGAGGAAGCCTGGGGTGCCTGGCCATTCAGAGGTCCTCAGTACACGGAcatcccttggtatcctcagagaattggttccaa</dnaseq>| | sequence = <dnaseq>CTGCTAATAGACTAATAGAAGCATCTTTGTTGCAGCCAATCACCTCTAGCCTGGGAACACCGCTAGTCAGGAGGCCTCAATCAACCTGAGAAGTCAGCCCAAGGCCCTGTCTCCAGAAGCCAGCAGCAGATCCCTGGGTCATGTCACAGGCAAGTCCTCACTTCACCAGCTCAGAGGATGACACTGGGTTACAACCATCCCACACGAGGAGAGTGACATGTCCCAACTTGCTTCTGGCCCATGTTTTACAAGAAGCTTGTCCGGCAGGCAAAATAGCCCTCAACACAGGAACACCTGTTGCAGCACCTGTCAGTAGCGTCTGGCACCCTGGCAGCTGACGTCTCAGTGCAGCCGGCAAGGACACTCTGGGAAGAGGACGCAGTGGCCTTATGAGTGAACGACGGAGAAGCCGGAGGGAGGAGGCCTGGCCTGTCTGCCTTGGAAGCTAATGATGCCCATTGTTTCTATACCCACCGCCCAGGCAGCTGTCCATCTGCCGATGCTCCTAACAGTTCGCCCTCAGAAGACCACGAGGAAGCCTGGGGTGCCTGGCCATTCAGAGGTCCTCAGTACACGGAcatcccttggtatcctcagagaattggttccaa</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG017939]] |
Revision as of 06:04, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT049647 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
611 nt |
| Genomic location |
chr15+:93161453..93171193 |
| Exon number |
4 |
| Exons |
93161453..93161628,93166735..93166993,93167515..93167648,93171152..93171193 |
| Genome context |
|
| Sequence |
000001 CTGCTAATAG ACTAATAGAA GCATCTTTGT TGCAGCCAAT CACCTCTAGC CTGGGAACAC CGCTAGTCAG GAGGCCTCAA 000080
000081 TCAACCTGAG AAGTCAGCCC AAGGCCCTGT CTCCAGAAGC CAGCAGCAGA TCCCTGGGTC ATGTCACAGG CAAGTCCTCA 000160 000161 CTTCACCAGC TCAGAGGATG ACACTGGGTT ACAACCATCC CACACGAGGA GAGTGACATG TCCCAACTTG CTTCTGGCCC 000240 000241 ATGTTTTACA AGAAGCTTGT CCGGCAGGCA AAATAGCCCT CAACACAGGA ACACCTGTTG CAGCACCTGT CAGTAGCGTC 000320 000321 TGGCACCCTG GCAGCTGACG TCTCAGTGCA GCCGGCAAGG ACACTCTGGG AAGAGGACGC AGTGGCCTTA TGAGTGAACG 000400 000401 ACGGAGAAGC CGGAGGGAGG AGGCCTGGCC TGTCTGCCTT GGAAGCTAAT GATGCCCATT GTTTCTATAC CCACCGCCCA 000480 000481 GGCAGCTGTC CATCTGCCGA TGCTCCTAAC AGTTCGCCCT CAGAAGACCA CGAGGAAGCC TGGGGTGCCT GGCCATTCAG 000560 000561 AGGTCCTCAG TACACGGAca tcccttggta tcctcagaga attggttcca a |
Predicted Small Protein
| Name | NONHSAT049647_smProtein_140:337 |
| Length | 66 |
| Molecular weight | 6775.5342 |
| Aromaticity | 0.0307692307692 |
| Instability index | 78.1353846154 |
| Isoelectric point | 6.36907958984 |
| Runs | 11 |
| Runs residual | 0.0189423076923 |
| Runs probability | 0.0288175876412 |
| Amino acid sequence | MSQASPHFTSSEDDTGLQPSHTRRVTCPNLLLAHVLQEACPAGKIALNTGTPVAAPVSSV WHPGS |
| Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEELLHHHHHHHHHHHHLLLLLEEELLLLEEELLLLLE ELLLL |
| PRMN | - |
| PiMo | - |
