Difference between revisions of "NONHSAT068786"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCGTTGTTGGACATTTAGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATATGTGTGCATGTGTCTTTATAGCAGCATGATATTAAATACCATGAAAATGTACATAGTTGTTTTAGTGGATATCCCCAAAAATATAATGTGGTACCAATTCCCAAAGTCTAGATCCCTGGAAATTTGAATAGGATGCTTTACAATAACTAGATAGGATCTTTTATCTTAAGAAATTGTATAGAAAATATTTGTTGAAAGATATACATTCAGTGAACAGAATAAAATCAAGAACACTTGGTGCTTTGAAAACCATGTCACGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGATGATTTTGCTTAGTTACATTCTTAAAACTCCCAATCATAAACAAGAAATACATGTAATTAAAATTTAGATAATAATATTTAAGACGGTTGTTATAAAGAACAACTATATTACATAAAATATTAAATTATACATTATTAGATAAATACATTTTTATTATGTCAATCAGGATTTAGATTTATCACTATTACCTACT</dnaseq>| | sequence = <dnaseq>TTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCGTTGTTGGACATTTAGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATATGTGTGCATGTGTCTTTATAGCAGCATGATATTAAATACCATGAAAATGTACATAGTTGTTTTAGTGGATATCCCCAAAAATATAATGTGGTACCAATTCCCAAAGTCTAGATCCCTGGAAATTTGAATAGGATGCTTTACAATAACTAGATAGGATCTTTTATCTTAAGAAATTGTATAGAAAATATTTGTTGAAAGATATACATTCAGTGAACAGAATAAAATCAAGAACACTTGGTGCTTTGAAAACCATGTCACGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGATGATTTTGCTTAGTTACATTCTTAAAACTCCCAATCATAAACAAGAAATACATGTAATTAAAATTTAGATAATAATATTTAAGACGGTTGTTATAAAGAACAACTATATTACATAAAATATTAAATTATACATTATTAGATAAATACATTTTTATTATGTCAATCAGGATTTAGATTTATCACTATTACCTACT</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Latest revision as of 23:10, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT068786 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
627 nt |
| Genomic location |
chr2-:4655665..4668820 |
| Exon number |
2 |
| Exons |
4655665..4655855,4668385..4668820 |
| Genome context |
|
| Sequence |
000001 TTTTTATGGC TGCATAGTAT TCCATGGTGT ATATGTGCCA CATTTTCTTA ATCCAGTCTA TCGTTGTTGG ACATTTAGGT 000080
000081 TGGTTCCAAG TCTTTGCTAT TGTGAATAGT GCCGCAATAA ACATATGTGT GCATGTGTCT TTATAGCAGC ATGATATTAA 000160 000161 ATACCATGAA AATGTACATA GTTGTTTTAG TGGATATCCC CAAAAATATA ATGTGGTACC AATTCCCAAA GTCTAGATCC 000240 000241 CTGGAAATTT GAATAGGATG CTTTACAATA ACTAGATAGG ATCTTTTATC TTAAGAAATT GTATAGAAAA TATTTGTTGA 000320 000321 AAGATATACA TTCAGTGAAC AGAATAAAAT CAAGAACACT TGGTGCTTTG AAAACCATGT CACGGCTGGG CGCGGTGGCT 000400 000401 CACGCCTGTA ATCCCAGCAC TTTGGGAGGC TGATGATTTT GCTTAGTTAC ATTCTTAAAA CTCCCAATCA TAAACAAGAA 000480 000481 ATACATGTAA TTAAAATTTA GATAATAATA TTTAAGACGG TTGTTATAAA GAACAACTAT ATTACATAAA ATATTAAATT 000560 000561 ATACATTATT AGATAAATAC ATTTTTATTA TGTCAATCAG GATTTAGATT TATCACTATT ACCTACT |
Predicted Small Protein
| Name | NONHSAT068786_smProtein_23:145 |
| Length | 41 |
| Molecular weight | 4474.3827 |
| Aromaticity | 0.125 |
| Instability index | 52.9025 |
| Isoelectric point | 6.79632568359 |
| Runs | 9 |
| Runs residual | 0.0469758064516 |
| Runs probability | 0.0239160729357 |
| Amino acid sequence | MVYMCHIFLIQSIVVGHLGWFQVFAIVNSAAINICVHVSL |
| Secondary structure | LEEEHHHHHHHHHHHHLLLHHHHHHLHHHHHHEEEEEELL |
| PRMN | LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
| PiMo | ooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiii |
