Difference between revisions of "NONHSAT069019"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GATTTAAGGATCTCTAGGCAGTGTTGTCTTAAACTTTTCTTTTTTTTTTGGAAACttttattttaatacagaatctaatctacagaaaagttgcaaagaacttctatatgccctttacccagactcaccagtcatttatgttttccctgttacttcctcatctcccctctctctgtcttttatacacaGTGTGTACAATgtgtattcgcttttttagaacgaactttatccatagtagcagtgtacattcccactagcaacttaggagagtttcagttactctactccacatccttccaacagttgatatcaccagtGTAACTGCATAAGTAATGTTAATTTAAAGATACAGCAAATGTTTTTGTTTCTTTATTTCAGATGAGAAATAACTTTAGACATTATTTCATTGAACCTTCCCAACTGAAATTATTTTATGATGTTATAACATGGATAGTAACTCAAGTAGCAATAAGTTACACAGTTGTGCCATTTGTGCTTCTTTCTATAAAACCATCACTCACGTTTTACAGCTCCTGGTATTATTGCCTGCACATTCTTGGTATCTTAGTATTATTG</dnaseq>| | sequence = <dnaseq>GATTTAAGGATCTCTAGGCAGTGTTGTCTTAAACTTTTCTTTTTTTTTTGGAAACttttattttaatacagaatctaatctacagaaaagttgcaaagaacttctatatgccctttacccagactcaccagtcatttatgttttccctgttacttcctcatctcccctctctctgtcttttatacacaGTGTGTACAATgtgtattcgcttttttagaacgaactttatccatagtagcagtgtacattcccactagcaacttaggagagtttcagttactctactccacatccttccaacagttgatatcaccagtGTAACTGCATAAGTAATGTTAATTTAAAGATACAGCAAATGTTTTTGTTTCTTTATTTCAGATGAGAAATAACTTTAGACATTATTTCATTGAACCTTCCCAACTGAAATTATTTTATGATGTTATAACATGGATAGTAACTCAAGTAGCAATAAGTTACACAGTTGTGCCATTTGTGCTTCTTTCTATAAAACCATCACTCACGTTTTACAGCTCCTGGTATTATTGCCTGCACATTCTTGGTATCTTAGTATTATTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG026945]] |
Revision as of 12:04, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT069019 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
576 nt |
| Genomic location |
chr2-:8998989..9001272 |
| Exon number |
2 |
| Exons |
8998989..8999034,9000743..9001272 |
| Genome context |
|
| Sequence |
000001 GATTTAAGGA TCTCTAGGCA GTGTTGTCTT AAACTTTTCT TTTTTTTTTG GAAACtttta ttttaataca gaatctaatc 000080
000081 tacagaaaag ttgcaaagaa cttctatatg ccctttaccc agactcacca gtcatttatg ttttccctgt tacttcctca 000160 000161 tctcccctct ctctgtcttt tatacacaGT GTGTACAATg tgtattcgct tttttagaac gaactttatc catagtagca 000240 000241 gtgtacattc ccactagcaa cttaggagag tttcagttac tctactccac atccttccaa cagttgatat caccagtGTA 000320 000321 ACTGCATAAG TAATGTTAAT TTAAAGATAC AGCAAATGTT TTTGTTTCTT TATTTCAGAT GAGAAATAAC TTTAGACATT 000400 000401 ATTTCATTGA ACCTTCCCAA CTGAAATTAT TTTATGATGT TATAACATGG ATAGTAACTC AAGTAGCAAT AAGTTACACA 000480 000481 GTTGTGCCAT TTGTGCTTCT TTCTATAAAA CCATCACTCA CGTTTTACAG CTCCTGGTAT TATTGCCTGC ACATTCTTGG 000560 000561 TATCTTAGTA TTATTG |
Predicted Small Protein
| Name | NONHSAT069019_smProtein_107:256 |
| Length | 50 |
| Molecular weight | 5758.7635 |
| Aromaticity | 0.142857142857 |
| Instability index | 55.0102040816 |
| Isoelectric point | 8.68756103516 |
| Runs | 7 |
| Runs residual | 0.019194704909 |
| Runs probability | 0.0450450450451 |
| Amino acid sequence | MPFTQTHQSFMFSLLLPHLPSLCLLYTVCTMCIRFFRTNFIHSSSVHSH |
| Secondary structure | LLLLLHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHLEEEELLLLLL |
| PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
| PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii |
