Difference between revisions of "NONHSAT072103"

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sequence = <dnaseq>GGAGACCAGAAAGTTGGCATATGATCTGAAGGTGCAGGAAGCTAGATCTTGAAAGTCTTTGGAATGGTTGTATAGAGCCGAGTTGTGTTTGGCCCACAGCTCCTGGCTGCCTGGCTTTAATAATGGGCTTAGGGTTGTTCAGACACGCTTCATTAATGCCGGTGCTGTGTCCCACCAGGACTGTCTCATCTTTACTGCAGAGGAGGAGGAGTATTTTTGTTAGCGTTAGGTAGGGCCTGTAAGTGACGTTTGGAGTCATTAAGAATTGAAGGTGTGTGTGGAATTTGATGGGGAATCTTGGAGGAAAAGAAGATGGATAGAAGTCTACAGCCTTCTAAGGAGAGCATTTTTA</dnaseq>|
 
sequence = <dnaseq>GGAGACCAGAAAGTTGGCATATGATCTGAAGGTGCAGGAAGCTAGATCTTGAAAGTCTTTGGAATGGTTGTATAGAGCCGAGTTGTGTTTGGCCCACAGCTCCTGGCTGCCTGGCTTTAATAATGGGCTTAGGGTTGTTCAGACACGCTTCATTAATGCCGGTGCTGTGTCCCACCAGGACTGTCTCATCTTTACTGCAGAGGAGGAGGAGTATTTTTGTTAGCGTTAGGTAGGGCCTGTAAGTGACGTTTGGAGTCATTAAGAATTGAAGGTGTGTGTGGAATTTGATGGGGAATCTTGGAGGAAAAGAAGATGGATAGAAGTCTACAGCCTTCTAAGGAGAGCATTTTTA</dnaseq>|
 
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[[Category:Sense]]
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[[Category:Sense]][[Category:NONHSAG028421]]

Revision as of 13:16, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT072103

Source

NONCODE4.0

Same with

,

Classification

sense

Length

352 nt

Genomic location

chr2+:86669447..86677010

Exon number

2

Exons

86669447..86669717,86676930..86677010

Genome context

Sequence
000001 GGAGACCAGA AAGTTGGCAT ATGATCTGAA GGTGCAGGAA GCTAGATCTT GAAAGTCTTT GGAATGGTTG TATAGAGCCG 000080
000081 AGTTGTGTTT GGCCCACAGC TCCTGGCTGC CTGGCTTTAA TAATGGGCTT AGGGTTGTTC AGACACGCTT CATTAATGCC 000160
000161 GGTGCTGTGT CCCACCAGGA CTGTCTCATC TTTACTGCAG AGGAGGAGGA GTATTTTTGT TAGCGTTAGG TAGGGCCTGT 000240
000241 AAGTGACGTT TGGAGTCATT AAGAATTGAA GGTGTGTGTG GAATTTGATG GGGAATCTTG GAGGAAAAGA AGATGGATAG 000320
000321 AAGTCTACAG CCTTCTAAGG AGAGCATTTT TA
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Predicted Small Protein

Name NONHSAT072103_smProtein_122:232
Length 37
Molecular weight 4085.9129
Aromaticity 0.0555555555556
Instability index 96.4111111111
Isoelectric point 12.3012084961
Runs 5
Runs residual 0.0415695415695
Runs probability 0.022151563328
Amino acid sequence MGLGLFRHASLMPVLCPTRTVSSLLQRRRSIFVSVR
Secondary structure LLLLLLLLLLLLLLLLLLLLHHHHHHLLLEEEEEEL
PRMN -
PiMo -