Difference between revisions of "NONHSAT076461"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>ATGGCTTATCCAGTTCAATTAGGCCTTCAAGACACCACATCCCCTATTATAGAAGAACTACTCACTTTCCATGACCATGCTCTTATAATTATTTTCCTAATTAGTTCCCTGGTCCTAGACATCATTTCCCTAATACTCACAACAAAATTAACTCATACTGGCACCATAGATGCTCAAGAAATCGAAACTGTGTGAACTGTTTTACCTGCCATTATCTTAATTTTAATTGCCCTCCCATCCCTACGTATTGTGCACATAATAGACAAGGTTAACAATCCTTCTCTTACTGTCAAAGCAGTTGGCCACCAGTGATATTGAAGCTCTAAATATACAGACTATGAAGAGTTAGGCTTTGATTCTTATATGATTCCAACAGCAGACTTAAAGCCAGAACTTCGACTCCTTGAAGTTGATAACTGAACAATTCTCCCAACAGAGATCCCTGTCCATATATTAATCTCATCCGAAGACATCCTGCATTCATGAACTATCCCCTTACTGGGCCTCAAAACAGATGGAATCCCCGGACGCTTAAATTAAACTACCTTAACTGCTACATGTCCAGGCCTTTACTATGGACAGTGCTCAGAAATTTGTGGGTCTAACCACAGTTTTATACTTATTGTCCTAGAATTAACCCCCTTAAAATGCTTTGAAACCTGATCCACGTCTGCACT</dnaseq>| | sequence = <dnaseq>ATGGCTTATCCAGTTCAATTAGGCCTTCAAGACACCACATCCCCTATTATAGAAGAACTACTCACTTTCCATGACCATGCTCTTATAATTATTTTCCTAATTAGTTCCCTGGTCCTAGACATCATTTCCCTAATACTCACAACAAAATTAACTCATACTGGCACCATAGATGCTCAAGAAATCGAAACTGTGTGAACTGTTTTACCTGCCATTATCTTAATTTTAATTGCCCTCCCATCCCTACGTATTGTGCACATAATAGACAAGGTTAACAATCCTTCTCTTACTGTCAAAGCAGTTGGCCACCAGTGATATTGAAGCTCTAAATATACAGACTATGAAGAGTTAGGCTTTGATTCTTATATGATTCCAACAGCAGACTTAAAGCCAGAACTTCGACTCCTTGAAGTTGATAACTGAACAATTCTCCCAACAGAGATCCCTGTCCATATATTAATCTCATCCGAAGACATCCTGCATTCATGAACTATCCCCTTACTGGGCCTCAAAACAGATGGAATCCCCGGACGCTTAAATTAAACTACCTTAACTGCTACATGTCCAGGCCTTTACTATGGACAGTGCTCAGAAATTTGTGGGTCTAACCACAGTTTTATACTTATTGTCCTAGAATTAACCCCCTTAAAATGCTTTGAAACCTGATCCACGTCTGCACT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG030284]] |
Revision as of 06:38, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT076461 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
677 nt |
| Genomic location |
chr2+:203479576..203480252 |
| Exon number |
1 |
| Exons |
203479576..203480252 |
| Genome context |
|
| Sequence |
000001 ATGGCTTATC CAGTTCAATT AGGCCTTCAA GACACCACAT CCCCTATTAT AGAAGAACTA CTCACTTTCC ATGACCATGC 000080
000081 TCTTATAATT ATTTTCCTAA TTAGTTCCCT GGTCCTAGAC ATCATTTCCC TAATACTCAC AACAAAATTA ACTCATACTG 000160 000161 GCACCATAGA TGCTCAAGAA ATCGAAACTG TGTGAACTGT TTTACCTGCC ATTATCTTAA TTTTAATTGC CCTCCCATCC 000240 000241 CTACGTATTG TGCACATAAT AGACAAGGTT AACAATCCTT CTCTTACTGT CAAAGCAGTT GGCCACCAGT GATATTGAAG 000320 000321 CTCTAAATAT ACAGACTATG AAGAGTTAGG CTTTGATTCT TATATGATTC CAACAGCAGA CTTAAAGCCA GAACTTCGAC 000400 000401 TCCTTGAAGT TGATAACTGA ACAATTCTCC CAACAGAGAT CCCTGTCCAT ATATTAATCT CATCCGAAGA CATCCTGCAT 000480 000481 TCATGAACTA TCCCCTTACT GGGCCTCAAA ACAGATGGAA TCCCCGGACG CTTAAATTAA ACTACCTTAA CTGCTACATG 000560 000561 TCCAGGCCTT TACTATGGAC AGTGCTCAGA AATTTGTGGG TCTAACCACA GTTTTATACT TATTGTCCTA GAATTAACCC 000640 000641 CCTTAAAATG CTTTGAAACC TGATCCACGT CTGCACT |
Predicted Small Protein
| Name | NONHSAT076461_smProtein_482:604 |
| Length | 41 |
| Molecular weight | 4936.7833 |
| Aromaticity | 0.15 |
| Instability index | 70.8225 |
| Isoelectric point | 10.4369506836 |
| Runs | 7 |
| Runs residual | 0.00302419354839 |
| Runs probability | 0.0237842884902 |
| Amino acid sequence | MNYPLTGPQNRWNPRTLKLNYLNCYMSRPLLWTVLRNLWV |
| Secondary structure | LLLLLLLLLLLLLLLEELHHHHLLLLLLHHHHHHHHHHLL |
| PRMN | - |
| PiMo | - |
