Difference between revisions of "NONHSAT078744"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AATTCGAAAGAATCAGCGTTCTTCAGTTAAAATATACAGGGGCGGTCCCTGGGGAGGGATGAAGCAGGGATGATTTTCTGTCCTCATCTGCAACCCTAAAGGCAGATCCTGTCCGAAGCTGCTGAAAGCATGGAGCATGGGAAGCACCTGGGAAGAACACCTGGCACTCAAAAGCACAGGAGGTCACCAAAGTGTGAATGATTTGGAGACCAAGGCAAGAACTCTGGCTCTGGAATCAAATCAGGAGAATGCCCTAATTGCGACTGTACTGCTATTGTTGAGAAGACAACTTGACAACTCACTGTTGGTGAAGTAACTTTCTGAAGACTTGAACCTCATGCATTTCCTCCAGAAACAGACACAAGTGGAGGACCCAAGGTTAGGGATGAGGAGCACATGATGATAGGGCCATGTGGCACCTCAGGGACTTGTTAATCGGTCATGTAATTAGGAGCCTCTTGCTTGGCTCTGCTTGCATTAATGTTTGTGTGGTTTGTAATGTCTGTGTAATGTGAGAAGAGACAAGCCAAATAGAAAATAAAGATGGTTTCTTGCTTCTCATGAGATGCTT</dnaseq>| | sequence = <dnaseq>AATTCGAAAGAATCAGCGTTCTTCAGTTAAAATATACAGGGGCGGTCCCTGGGGAGGGATGAAGCAGGGATGATTTTCTGTCCTCATCTGCAACCCTAAAGGCAGATCCTGTCCGAAGCTGCTGAAAGCATGGAGCATGGGAAGCACCTGGGAAGAACACCTGGCACTCAAAAGCACAGGAGGTCACCAAAGTGTGAATGATTTGGAGACCAAGGCAAGAACTCTGGCTCTGGAATCAAATCAGGAGAATGCCCTAATTGCGACTGTACTGCTATTGTTGAGAAGACAACTTGACAACTCACTGTTGGTGAAGTAACTTTCTGAAGACTTGAACCTCATGCATTTCCTCCAGAAACAGACACAAGTGGAGGACCCAAGGTTAGGGATGAGGAGCACATGATGATAGGGCCATGTGGCACCTCAGGGACTTGTTAATCGGTCATGTAATTAGGAGCCTCTTGCTTGGCTCTGCTTGCATTAATGTTTGTGTGGTTTGTAATGTCTGTGTAATGTGAGAAGAGACAAGCCAAATAGAAAATAAAGATGGTTTCTTGCTTCTCATGAGATGCTT</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG031328]] |
Revision as of 07:39, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078744 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
571 nt |
Genomic location |
chr20+:16730019..16750707 |
Exon number |
3 |
Exons |
16730019..16730119,16744967..16745047,16750319..16750707 |
Genome context |
|
Sequence |
000001 AATTCGAAAG AATCAGCGTT CTTCAGTTAA AATATACAGG GGCGGTCCCT GGGGAGGGAT GAAGCAGGGA TGATTTTCTG 000080
000081 TCCTCATCTG CAACCCTAAA GGCAGATCCT GTCCGAAGCT GCTGAAAGCA TGGAGCATGG GAAGCACCTG GGAAGAACAC 000160 000161 CTGGCACTCA AAAGCACAGG AGGTCACCAA AGTGTGAATG ATTTGGAGAC CAAGGCAAGA ACTCTGGCTC TGGAATCAAA 000240 000241 TCAGGAGAAT GCCCTAATTG CGACTGTACT GCTATTGTTG AGAAGACAAC TTGACAACTC ACTGTTGGTG AAGTAACTTT 000320 000321 CTGAAGACTT GAACCTCATG CATTTCCTCC AGAAACAGAC ACAAGTGGAG GACCCAAGGT TAGGGATGAG GAGCACATGA 000400 000401 TGATAGGGCC ATGTGGCACC TCAGGGACTT GTTAATCGGT CATGTAATTA GGAGCCTCTT GCTTGGCTCT GCTTGCATTA 000480 000481 ATGTTTGTGT GGTTTGTAAT GTCTGTGTAA TGTGAGAAGA GACAAGCCAA ATAGAAAATA AAGATGGTTT CTTGCTTCTC 000560 000561 ATGAGATGCT T |
Predicted Small Protein
Name | NONHSAT078744_smProtein_410:514 |
Length | 35 |
Molecular weight | 3781.6709 |
Aromaticity | 0.0294117647059 |
Instability index | 43.7470588235 |
Isoelectric point | 7.71575927734 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0127715951245 |
Amino acid sequence | MWHLRDLLIGHVIRSLLLGSACINVCVVCNVCVM |
Secondary structure | LLHHHHHHHHHHHHHHHHLLLEEEEEEEEEEEEL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToo |