Difference between revisions of "NONHSAT084715"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ATGGCATCGGGCTGCAAGATTGGCCTGTCCATCCTCAATGCTACCTGGCCAATTTAGGGGCCCAGTGCCTCTGGATGCTAGACTCTGGGGTCGATTATCTCCACCGGAATGTAATGGATGAACATGCATGTGATGGTGTCCAAGCCAGAACAGTGGGTAAAGCCAATGGCTATAAGAGGAGCCAATCAGTACATCTTTCATCTCGAGGAAACTGAGAACCCAGGGGCTTTGATTAAAGACATTCAGGAGAATGGGATGAAGGTTGGCCTTGCCATAAAACCAGGAACCTCAGTTCAGTATTTGGCACCATGGGCTAATCAACTAGGTATGACCTTGGTTATGACAGTGGAACCAGGGTTTGGAGGGCATAAATTCATGGAAGATATGATGTTAAAGGTTCACTGGTTGAGGATCCAGTTCCCATCTTTGGCTATAGAGGTCGCTGGTGGAATAGATCCTGACACTGTCCATAGGTGTGCAGAGGCGAAGCTAACATGATTGTGTCTGGCAGTGCTATGGTGAGGAGTGAAGACCCTAGATCTGTGATCAGCCTGTTAAGAAACATTTGCTCAGAAGCTGCTCAGAAAGATTCTCTTGATTGA</dnaseq>| | sequence = <dnaseq>ATGGCATCGGGCTGCAAGATTGGCCTGTCCATCCTCAATGCTACCTGGCCAATTTAGGGGCCCAGTGCCTCTGGATGCTAGACTCTGGGGTCGATTATCTCCACCGGAATGTAATGGATGAACATGCATGTGATGGTGTCCAAGCCAGAACAGTGGGTAAAGCCAATGGCTATAAGAGGAGCCAATCAGTACATCTTTCATCTCGAGGAAACTGAGAACCCAGGGGCTTTGATTAAAGACATTCAGGAGAATGGGATGAAGGTTGGCCTTGCCATAAAACCAGGAACCTCAGTTCAGTATTTGGCACCATGGGCTAATCAACTAGGTATGACCTTGGTTATGACAGTGGAACCAGGGTTTGGAGGGCATAAATTCATGGAAGATATGATGTTAAAGGTTCACTGGTTGAGGATCCAGTTCCCATCTTTGGCTATAGAGGTCGCTGGTGGAATAGATCCTGACACTGTCCATAGGTGTGCAGAGGCGAAGCTAACATGATTGTGTCTGGCAGTGCTATGGTGAGGAGTGAAGACCCTAGATCTGTGATCAGCCTGTTAAGAAACATTTGCTCAGAAGCTGCTCAGAAAGATTCTCTTGATTGA</dnaseq>| | ||
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− | [[Category:Intronic(S)]] | + | [[Category:Intronic(S)]][[Category:NONHSAG033646]] |
Revision as of 09:52, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084715 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
602 nt |
Genomic location |
chr22+:30004889..30005490 |
Exon number |
1 |
Exons |
30004889..30005490 |
Genome context |
|
Sequence |
000001 ATGGCATCGG GCTGCAAGAT TGGCCTGTCC ATCCTCAATG CTACCTGGCC AATTTAGGGG CCCAGTGCCT CTGGATGCTA 000080
000081 GACTCTGGGG TCGATTATCT CCACCGGAAT GTAATGGATG AACATGCATG TGATGGTGTC CAAGCCAGAA CAGTGGGTAA 000160 000161 AGCCAATGGC TATAAGAGGA GCCAATCAGT ACATCTTTCA TCTCGAGGAA ACTGAGAACC CAGGGGCTTT GATTAAAGAC 000240 000241 ATTCAGGAGA ATGGGATGAA GGTTGGCCTT GCCATAAAAC CAGGAACCTC AGTTCAGTAT TTGGCACCAT GGGCTAATCA 000320 000321 ACTAGGTATG ACCTTGGTTA TGACAGTGGA ACCAGGGTTT GGAGGGCATA AATTCATGGA AGATATGATG TTAAAGGTTC 000400 000401 ACTGGTTGAG GATCCAGTTC CCATCTTTGG CTATAGAGGT CGCTGGTGGA ATAGATCCTG ACACTGTCCA TAGGTGTGCA 000480 000481 GAGGCGAAGC TAACATGATT GTGTCTGGCA GTGCTATGGT GAGGAGTGAA GACCCTAGAT CTGTGATCAG CCTGTTAAGA 000560 000561 AACATTTGCT CAGAAGCTGC TCAGAAAGAT TCTCTTGATT GA |
Predicted Small Protein
Name | NONHSAT084715_smProtein_74:214 |
Length | 47 |
Molecular weight | 5060.5401 |
Aromaticity | 0.0434782608696 |
Instability index | 51.7413043478 |
Isoelectric point | 7.97979736328 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0480186068422 |
Amino acid sequence | MLDSGVDYLHRNVMDEHACDGVQARTVGKANGYKRSQSVHLSSRGN |
Secondary structure | LLLLLLLHHHHHLLLHHHLLLEEEEEEEELLLLEEEEEEEEEELLL |
PRMN | - |
PiMo | - |