Difference between revisions of "NONHSAT089938"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| Line 42: | Line 42: | ||
sequence = <dnaseq>GCACTGACCCGTCAACTCCCGGTTTCCCGGCGCACGCCCCTCGTGAGATGCTGTGGTCTTTTCTAGCAACGTCGACAGGCTTTCCAACAAAATTCCTCTTTCCTGCGCAGAACCGCTCTCCACTCGCATTTCTTCTGCTCAGATCCGTATTCCGAGCCCGCACGCATACCAGGCTGTGCTCAGGGTCCGGAGGAGGCCGACCCAGTAGCCGTGGGCCCTGTCGGAGGGGAGCCAGCTGGGCGCGCGTTGTTTTCTGAGGTGGCCGCGCTGTCTTTCAGGGTGTGTGTACATTCGAAACtccactgaaccttgattgaagacctacagtgtggcagtccatggcctggggactgATGATGTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGAGACTGAACTTCAGCAGTCAATAAAGTCAATATGAATTTTTA</dnaseq>| | sequence = <dnaseq>GCACTGACCCGTCAACTCCCGGTTTCCCGGCGCACGCCCCTCGTGAGATGCTGTGGTCTTTTCTAGCAACGTCGACAGGCTTTCCAACAAAATTCCTCTTTCCTGCGCAGAACCGCTCTCCACTCGCATTTCTTCTGCTCAGATCCGTATTCCGAGCCCGCACGCATACCAGGCTGTGCTCAGGGTCCGGAGGAGGCCGACCCAGTAGCCGTGGGCCCTGTCGGAGGGGAGCCAGCTGGGCGCGCGTTGTTTTCTGAGGTGGCCGCGCTGTCTTTCAGGGTGTGTGTACATTCGAAACtccactgaaccttgattgaagacctacagtgtggcagtccatggcctggggactgATGATGTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGAGACTGAACTTCAGCAGTCAATAAAGTCAATATGAATTTTTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG035176]] |
Revision as of 11:26, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT089938 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
456 nt |
| Genomic location |
chr3+:52568541..52574542 |
| Exon number |
2 |
| Exons |
52568541..52568893,52574440..52574542 |
| Genome context |
|
| Sequence |
000001 GCACTGACCC GTCAACTCCC GGTTTCCCGG CGCACGCCCC TCGTGAGATG CTGTGGTCTT TTCTAGCAAC GTCGACAGGC 000080
000081 TTTCCAACAA AATTCCTCTT TCCTGCGCAG AACCGCTCTC CACTCGCATT TCTTCTGCTC AGATCCGTAT TCCGAGCCCG 000160 000161 CACGCATACC AGGCTGTGCT CAGGGTCCGG AGGAGGCCGA CCCAGTAGCC GTGGGCCCTG TCGGAGGGGA GCCAGCTGGG 000240 000241 CGCGCGTTGT TTTCTGAGGT GGCCGCGCTG TCTTTCAGGG TGTGTGTACA TTCGAAACtc cactgaacct tgattgaaga 000320 000321 cctacagtgt ggcagtccat ggcctgggga ctgATGATGT CTACCGTAGA AAAGCCTCAG AAAGACAGTA TCAGAGAAGG 000400 000401 CTGGAAGATG AATGAGACTG AACTTCAGCA GTCAATAAAG TCAATATGAA TTTTTA |
Predicted Small Protein
| Name | NONHSAT089938_smProtein_47:256 |
| Length | 70 |
| Molecular weight | 7630.8054 |
| Aromaticity | 0.130434782609 |
| Instability index | 57.3144927536 |
| Isoelectric point | 12.3690795898 |
| Runs | 9 |
| Runs residual | 0.0088965418281 |
| Runs probability | 0.0267522424386 |
| Amino acid sequence | MLWSFLATSTGFPTKFLFPAQNRSPLAFLLLRSVFRARTHTRLCSGSGGGRPSSRGPCRR GASWARVVF |
| Secondary structure | LLLLEEELLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLEEEELLLLLLLLLLLLLLLL LLLEEEEEL |
| PRMN | - |
| PiMo | - |
