Difference between revisions of "NONHSAT092895"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>CTTGGTTGACACTGCTTTTATTGTGGATAAAGGAGAGATGGTCAGTAATTAATGGCTTGAAGTATTATTGGAGTGGTTTATCATTTCTGAAACTAATCGTGTCAGAATTGACTTTGAAAAGCATTGCTTTTTACAGAAATATATTAACTTTTTAGGAGTAATTTCTAGTTTGGATTGTAATATGAAATAATTTAAAAGGGCTTCGCTCATATATAGGAAAATCGCATATGGTCCTAGTATTAAATTCTTATTGCTTACTGATTTTTTTGAGTTAAGAGTTGTTATATGCTAGAATATGAGGATGTGAATATAAATAAGAGAAGAAAAAAGAATAAAGTAGATTGAGTCTCCAATTTTATGTAAGCTTCAGAAGAACTGGTTTGTTTACATGCAAGCTTATAGTTGAAATATTTTTCAGGAATTACATGAATGACAGTCTTCGAACCAATGTGTTTGTTCGATTTCAACCAGAGACTATAGCATGTGCTTGCATCTACCTTGCAGCTAGAGCACTTCAGGTAGGTGTATATTTCCCATTTTGTTCTGTAGGATAAATCACACAAATTTTCGGTGGTTCCAATACAGATTTAGCAAAAATTTAATTTAAAACATTCTGTTCTTATGGTTTAGATTCCGTTGCCAACTCGTCCCCATTGGTTTCTTCTTTTTGGTACTACAGAAGAGGAAATCCAGGAAATCTGCATAGAAACACTTAGGCTTTATACCAGAAAAAAGCCAAACTATGAATTACTGGAAAAAGAAGTAGAAAAAA</dnaseq>| | sequence = <dnaseq>CTTGGTTGACACTGCTTTTATTGTGGATAAAGGAGAGATGGTCAGTAATTAATGGCTTGAAGTATTATTGGAGTGGTTTATCATTTCTGAAACTAATCGTGTCAGAATTGACTTTGAAAAGCATTGCTTTTTACAGAAATATATTAACTTTTTAGGAGTAATTTCTAGTTTGGATTGTAATATGAAATAATTTAAAAGGGCTTCGCTCATATATAGGAAAATCGCATATGGTCCTAGTATTAAATTCTTATTGCTTACTGATTTTTTTGAGTTAAGAGTTGTTATATGCTAGAATATGAGGATGTGAATATAAATAAGAGAAGAAAAAAGAATAAAGTAGATTGAGTCTCCAATTTTATGTAAGCTTCAGAAGAACTGGTTTGTTTACATGCAAGCTTATAGTTGAAATATTTTTCAGGAATTACATGAATGACAGTCTTCGAACCAATGTGTTTGTTCGATTTCAACCAGAGACTATAGCATGTGCTTGCATCTACCTTGCAGCTAGAGCACTTCAGGTAGGTGTATATTTCCCATTTTGTTCTGTAGGATAAATCACACAAATTTTCGGTGGTTCCAATACAGATTTAGCAAAAATTTAATTTAAAACATTCTGTTCTTATGGTTTAGATTCCGTTGCCAACTCGTCCCCATTGGTTTCTTCTTTTTGGTACTACAGAAGAGGAAATCCAGGAAATCTGCATAGAAACACTTAGGCTTTATACCAGAAAAAAGCCAAACTATGAATTACTGGAAAAAGAAGTAGAAAAAA</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG036490]] |
Revision as of 12:37, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092895 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
772 nt |
Genomic location |
chr3-:156867730..156868588 |
Exon number |
2 |
Exons |
156867730..156867766,156867854..156868588 |
Genome context |
|
Sequence |
000001 CTTGGTTGAC ACTGCTTTTA TTGTGGATAA AGGAGAGATG GTCAGTAATT AATGGCTTGA AGTATTATTG GAGTGGTTTA 000080
000081 TCATTTCTGA AACTAATCGT GTCAGAATTG ACTTTGAAAA GCATTGCTTT TTACAGAAAT ATATTAACTT TTTAGGAGTA 000160 000161 ATTTCTAGTT TGGATTGTAA TATGAAATAA TTTAAAAGGG CTTCGCTCAT ATATAGGAAA ATCGCATATG GTCCTAGTAT 000240 000241 TAAATTCTTA TTGCTTACTG ATTTTTTTGA GTTAAGAGTT GTTATATGCT AGAATATGAG GATGTGAATA TAAATAAGAG 000320 000321 AAGAAAAAAG AATAAAGTAG ATTGAGTCTC CAATTTTATG TAAGCTTCAG AAGAACTGGT TTGTTTACAT GCAAGCTTAT 000400 000401 AGTTGAAATA TTTTTCAGGA ATTACATGAA TGACAGTCTT CGAACCAATG TGTTTGTTCG ATTTCAACCA GAGACTATAG 000480 000481 CATGTGCTTG CATCTACCTT GCAGCTAGAG CACTTCAGGT AGGTGTATAT TTCCCATTTT GTTCTGTAGG ATAAATCACA 000560 000561 CAAATTTTCG GTGGTTCCAA TACAGATTTA GCAAAAATTT AATTTAAAAC ATTCTGTTCT TATGGTTTAG ATTCCGTTGC 000640 000641 CAACTCGTCC CCATTGGTTT CTTCTTTTTG GTACTACAGA AGAGGAAATC CAGGAAATCT GCATAGAAAC ACTTAGGCTT 000720 000721 TATACCAGAA AAAAGCCAAA CTATGAATTA CTGGAAAAAG AAGTAGAAAA AA |
Predicted Small Protein
Name | NONHSAT092895_smProtein_425:553 |
Length | 43 |
Molecular weight | 4672.4316 |
Aromaticity | 0.142857142857 |
Instability index | 54.3023809524 |
Isoelectric point | 7.72100830078 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0356070356071 |
Amino acid sequence | MNDSLRTNVFVRFQPETIACACIYLAARALQVGVYFPFCSVG |
Secondary structure | LLLLLLLLEEEELLLHHHHHHHHHHHHHHHLLLEEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooo |