Difference between revisions of "NONHSAT101551"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ACAGCACTAGGGGGCCCCTGCCACATCAAAGAGAAGCATCTATGAGGGGTTACTGCCATAATGCCAACCTTCTTGCTGTGCTTTGAGAAACAAACCAAATCCCACCTCCCTTCAAAGAGCTCTACTTGCTATGAAAAGTAATCCCACCCCCTACTAAAGTCCTGAGACTTAGGTGGCCCTGAGGCCAGTAGGAGGCTTTGGGGTATCTCAAGAGCAGCCACACTTCTCCACCAAGGAAGTGTTCACATAGTGCACACTCATCTTGTGTTCGTCATCCTGGACCATCAGGGAGAAGAGTCTGACCATGGTGGGACGGCAGGTCTGGAAGAGCCAGGGACAGGCTGGCATCAGCGACATCAGTGGCTGGAATCTTTGTCTCTGCCAAGAGGGTGGGCACCACCTCCATCCAATACGTGAGTAAACAGTAGATATCCAATAATGACCCTCCCTCTGACTGGTAGGATGAAAAGATAATGGGGAAAGATCCCAGAAGGAATCTTTGGAGGCCCCTTCTATGGTCCTCGAACTCTAGAACAAGCTCAGTGGCATGGGGGACAATGGGCACCCAAGCCCATAACTTTATCAAGGAAACCCCCAAGAAGGAAACTGCCTCAAAACAGAGAAGCCAGTAGCTGTGTAGGAACTATGAGCCTGTAGGGAAAGAAGAGTGGAAGCTCCAGGAGGCCACTATCGTGGAAAGTCCCACCTCCCTTTCAGCTTCTTACTCCCCACTACCCAGCCGGGCAGGACAGGACAAAGACTTAGCAGTCTCAGCTTG</dnaseq>| | sequence = <dnaseq>ACAGCACTAGGGGGCCCCTGCCACATCAAAGAGAAGCATCTATGAGGGGTTACTGCCATAATGCCAACCTTCTTGCTGTGCTTTGAGAAACAAACCAAATCCCACCTCCCTTCAAAGAGCTCTACTTGCTATGAAAAGTAATCCCACCCCCTACTAAAGTCCTGAGACTTAGGTGGCCCTGAGGCCAGTAGGAGGCTTTGGGGTATCTCAAGAGCAGCCACACTTCTCCACCAAGGAAGTGTTCACATAGTGCACACTCATCTTGTGTTCGTCATCCTGGACCATCAGGGAGAAGAGTCTGACCATGGTGGGACGGCAGGTCTGGAAGAGCCAGGGACAGGCTGGCATCAGCGACATCAGTGGCTGGAATCTTTGTCTCTGCCAAGAGGGTGGGCACCACCTCCATCCAATACGTGAGTAAACAGTAGATATCCAATAATGACCCTCCCTCTGACTGGTAGGATGAAAAGATAATGGGGAAAGATCCCAGAAGGAATCTTTGGAGGCCCCTTCTATGGTCCTCGAACTCTAGAACAAGCTCAGTGGCATGGGGGACAATGGGCACCCAAGCCCATAACTTTATCAAGGAAACCCCCAAGAAGGAAACTGCCTCAAAACAGAGAAGCCAGTAGCTGTGTAGGAACTATGAGCCTGTAGGGAAAGAAGAGTGGAAGCTCCAGGAGGCCACTATCGTGGAAAGTCCCACCTCCCTTTCAGCTTCTTACTCCCCACTACCCAGCCGGGCAGGACAGGACAAAGACTTAGCAGTCTCAGCTTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG040430]] |
Revision as of 07:59, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT101551 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
778 nt |
| Genomic location |
chr5+:56066626..56068130 |
| Exon number |
2 |
| Exons |
56066626..56066965,56067686..56068130 |
| Genome context |
|
| Sequence |
000001 ACAGCACTAG GGGGCCCCTG CCACATCAAA GAGAAGCATC TATGAGGGGT TACTGCCATA ATGCCAACCT TCTTGCTGTG 000080
000081 CTTTGAGAAA CAAACCAAAT CCCACCTCCC TTCAAAGAGC TCTACTTGCT ATGAAAAGTA ATCCCACCCC CTACTAAAGT 000160 000161 CCTGAGACTT AGGTGGCCCT GAGGCCAGTA GGAGGCTTTG GGGTATCTCA AGAGCAGCCA CACTTCTCCA CCAAGGAAGT 000240 000241 GTTCACATAG TGCACACTCA TCTTGTGTTC GTCATCCTGG ACCATCAGGG AGAAGAGTCT GACCATGGTG GGACGGCAGG 000320 000321 TCTGGAAGAG CCAGGGACAG GCTGGCATCA GCGACATCAG TGGCTGGAAT CTTTGTCTCT GCCAAGAGGG TGGGCACCAC 000400 000401 CTCCATCCAA TACGTGAGTA AACAGTAGAT ATCCAATAAT GACCCTCCCT CTGACTGGTA GGATGAAAAG ATAATGGGGA 000480 000481 AAGATCCCAG AAGGAATCTT TGGAGGCCCC TTCTATGGTC CTCGAACTCT AGAACAAGCT CAGTGGCATG GGGGACAATG 000560 000561 GGCACCCAAG CCCATAACTT TATCAAGGAA ACCCCCAAGA AGGAAACTGC CTCAAAACAG AGAAGCCAGT AGCTGTGTAG 000640 000641 GAACTATGAG CCTGTAGGGA AAGAAGAGTG GAAGCTCCAG GAGGCCACTA TCGTGGAAAG TCCCACCTCC CTTTCAGCTT 000720 000721 CTTACTCCCC ACTACCCAGC CGGGCAGGAC AGGACAAAGA CTTAGCAGTC TCAGCTTG |
Predicted Small Protein
| Name | NONHSAT101551_smProtein_473:631 |
| Length | 53 |
| Molecular weight | 5987.7061 |
| Aromaticity | 0.0769230769231 |
| Instability index | 52.425 |
| Isoelectric point | 11.4802856445 |
| Runs | 9 |
| Runs residual | 0.0227075184702 |
| Runs probability | 0.0345050933286 |
| Amino acid sequence | MGKDPRRNLWRPLLWSSNSRTSSVAWGTMGTQAHNFIKETPKKETASKQRSQ |
| Secondary structure | LLLLLLLLLLLLLEELLLLLLLLEEEELLLHHHHHHHHLLLLHHHHLLLLLL |
| PRMN | - |
| PiMo | - |
