Difference between revisions of "NONHSAT113305"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AAAACAGGGAGGATATGATTATAAGTTCAGTTTGTGTTTTTTGTTGAGTGAATGTCTCCAGCCATAGAGATGCAAGTGTAGATACACAGTAAGAGTAGTATGAATGGCAGACACCTTGGAAGGCTATTTCTTCCTTCATTCATTCAGTTGGTCACTCAATGAACTATCATGAATTGAGCACTACCTCTGTTTCTTATCAACAAAGGAGACTACGGAAAAGAAGAGTGACTAAGATCTCTGAAGAAGGGAAAAGCTAGATGACTGGGCCACAAGAGGAAAAAAAGCAGCAAGACAGcttgaatgtgaggcaactgtgaaaagtgcagggcagagccacctgggtaaatacagccctggctttctggtgagaggactgaaaccaggatgtgtcaagtaactagaatgtgcctggacagatactgtagaaagcaaacccataaagttgttcatgagcttgtggatgcacctgccagctgtgaataagtggctctaatcccaaacaacttacctaaaaagagcctgaggactgaactgaacaatggtccactttccagtcctcactgaccactggttgcacacactccagagatctctcaaccgcagtgtcaaggctttcaaat</dnaseq>| | sequence = <dnaseq>AAAACAGGGAGGATATGATTATAAGTTCAGTTTGTGTTTTTTGTTGAGTGAATGTCTCCAGCCATAGAGATGCAAGTGTAGATACACAGTAAGAGTAGTATGAATGGCAGACACCTTGGAAGGCTATTTCTTCCTTCATTCATTCAGTTGGTCACTCAATGAACTATCATGAATTGAGCACTACCTCTGTTTCTTATCAACAAAGGAGACTACGGAAAAGAAGAGTGACTAAGATCTCTGAAGAAGGGAAAAGCTAGATGACTGGGCCACAAGAGGAAAAAAAGCAGCAAGACAGcttgaatgtgaggcaactgtgaaaagtgcagggcagagccacctgggtaaatacagccctggctttctggtgagaggactgaaaccaggatgtgtcaagtaactagaatgtgcctggacagatactgtagaaagcaaacccataaagttgttcatgagcttgtggatgcacctgccagctgtgaataagtggctctaatcccaaacaacttacctaaaaagagcctgaggactgaactgaacaatggtccactttccagtcctcactgaccactggttgcacacactccagagatctctcaaccgcagtgtcaaggctttcaaat</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG044021]] |
Revision as of 11:40, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT113305 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
620 nt |
| Genomic location |
chr6-:58186881..58192620 |
| Exon number |
2 |
| Exons |
58186881..58187205,58192326..58192620 |
| Genome context |
|
| Sequence |
000001 AAAACAGGGA GGATATGATT ATAAGTTCAG TTTGTGTTTT TTGTTGAGTG AATGTCTCCA GCCATAGAGA TGCAAGTGTA 000080
000081 GATACACAGT AAGAGTAGTA TGAATGGCAG ACACCTTGGA AGGCTATTTC TTCCTTCATT CATTCAGTTG GTCACTCAAT 000160 000161 GAACTATCAT GAATTGAGCA CTACCTCTGT TTCTTATCAA CAAAGGAGAC TACGGAAAAG AAGAGTGACT AAGATCTCTG 000240 000241 AAGAAGGGAA AAGCTAGATG ACTGGGCCAC AAGAGGAAAA AAAGCAGCAA GACAGcttga atgtgaggca actgtgaaaa 000320 000321 gtgcagggca gagccacctg ggtaaataca gccctggctt tctggtgaga ggactgaaac caggatgtgt caagtaacta 000400 000401 gaatgtgcct ggacagatac tgtagaaagc aaacccataa agttgttcat gagcttgtgg atgcacctgc cagctgtgaa 000480 000481 taagtggctc taatcccaaa caacttacct aaaaagagcc tgaggactga actgaacaat ggtccacttt ccagtcctca 000560 000561 ctgaccactg gttgcacaca ctccagagat ctctcaaccg cagtgtcaag gctttcaaat |
Predicted Small Protein
| Name | NONHSAT113305_smProtein_158:256 |
| Length | 33 |
| Molecular weight | 3869.3297 |
| Aromaticity | 0.0625 |
| Instability index | 79.815625 |
| Isoelectric point | 10.5199584961 |
| Runs | 7 |
| Runs residual | 0.0271045918367 |
| Runs probability | 0.021412168471 |
| Amino acid sequence | MNYHELSTTSVSYQQRRLRKRRVTKISEEGKS |
| Secondary structure | LLEEEELLLLHHHHHHHHHHLLLEEELLLLLL |
| PRMN | - |
| PiMo | - |
