Difference between revisions of "NONHSAT113519"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>ACGTTTCCTACTAGCCTGTAAACTGAATATAGGCTAAAAAGGTAGAACTATTAATAAATTTAGACCTTAATATGTAGACATTTACTTTTCTGTTACTATGTATAATGTGTATATATATATATAAAATACAGGCTGCTAAGTGTATTGTCCACTATGAGGACCAAACTGCACTCCAGCCGGGGCAACAGACAGAGACGCCATCTCAAAAAAAAAAAAAAAAAAGGAAAGTAAGTAATCAAACAAGAAAGGTATGTGGGACACACAGCAGACAAAAGATTAGTAACCAGAGTACATAGAGAGCTCTTACACTCCTACAGTCAATGAGAAAAAGATTTAAAATCCAATGGAAAACGAGCATCAATTTTCAAACTATCAGAAAGACCAAAATTAAAAGTTTAACAATGCCAGCTGTTGGTAAGAATATAAATTGTCATAACTACATTGGAGAATAGTT</dnaseq>| | sequence = <dnaseq>ACGTTTCCTACTAGCCTGTAAACTGAATATAGGCTAAAAAGGTAGAACTATTAATAAATTTAGACCTTAATATGTAGACATTTACTTTTCTGTTACTATGTATAATGTGTATATATATATATAAAATACAGGCTGCTAAGTGTATTGTCCACTATGAGGACCAAACTGCACTCCAGCCGGGGCAACAGACAGAGACGCCATCTCAAAAAAAAAAAAAAAAAAGGAAAGTAAGTAATCAAACAAGAAAGGTATGTGGGACACACAGCAGACAAAAGATTAGTAACCAGAGTACATAGAGAGCTCTTACACTCCTACAGTCAATGAGAAAAAGATTTAAAATCCAATGGAAAACGAGCATCAATTTTCAAACTATCAGAAAGACCAAAATTAAAAGTTTAACAATGCCAGCTGTTGGTAAGAATATAAATTGTCATAACTACATTGGAGAATAGTT</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Latest revision as of 01:55, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT113519 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
454 nt |
| Genomic location |
chr6+:72217258..72225298 |
| Exon number |
4 |
| Exons |
72217258..72217330,72219428..72219518,72224903..72225095,72225202..72225298 |
| Genome context |
|
| Sequence |
000001 ACGTTTCCTA CTAGCCTGTA AACTGAATAT AGGCTAAAAA GGTAGAACTA TTAATAAATT TAGACCTTAA TATGTAGACA 000080
000081 TTTACTTTTC TGTTACTATG TATAATGTGT ATATATATAT ATAAAATACA GGCTGCTAAG TGTATTGTCC ACTATGAGGA 000160 000161 CCAAACTGCA CTCCAGCCGG GGCAACAGAC AGAGACGCCA TCTCAAAAAA AAAAAAAAAA AAGGAAAGTA AGTAATCAAA 000240 000241 CAAGAAAGGT ATGTGGGACA CACAGCAGAC AAAAGATTAG TAACCAGAGT ACATAGAGAG CTCTTACACT CCTACAGTCA 000320 000321 ATGAGAAAAA GATTTAAAAT CCAATGGAAA ACGAGCATCA ATTTTCAAAC TATCAGAAAG ACCAAAATTA AAAGTTTAAC 000400 000401 AATGCCAGCT GTTGGTAAGA ATATAAATTG TCATAACTAC ATTGGAGAAT AGTT |
Predicted Small Protein
| Name | NONHSAT113519_smProtein_104:295 |
| Length | 64 |
| Molecular weight | 7267.3169 |
| Aromaticity | 0.047619047619 |
| Instability index | 46.9206349206 |
| Isoelectric point | 9.96856689453 |
| Runs | 11 |
| Runs residual | 0.0296404275996 |
| Runs probability | 0.0299657946717 |
| Amino acid sequence | MCIYIYKIQAAKCIVHYEDQTALQPGQQTETPSQKKKKKRKVSNQTRKVCGTHSRQKISN QST |
| Secondary structure | LEEEEEEEEEEEEEEEEELLLLLLLLLLLLLLLHHHLLLLEELLLLLEEEELLLLLEEEL LLL |
| PRMN | - |
| PiMo | - |
