Difference between revisions of "NONHSAT113962"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ATGCACCGGAGATCTCTCCAGCACCAGGAGCAGCCGCTGGACAGCAAGGAGCGGCAGCCTATGGTTAGCCATTGGGAGATCTCCGCCAGGGCCCTGGGTTCTCTGTGCAGACAGTTCCAAAGAAGGCTGCCCCTAAGAGCCGTCAACCTCAACCTCCGGACAGGTACCTCCTAGAAACCCCTAGAAACCAGGGTCAGGGCAGTAAGAGACTCCAGGCTGCAGCTCGCTCAGCTAAGAGCACCCTGGGTGCCATGTCACAGAGAATCCAGGAGTCCTGCCAAAGTAGCACCAAGTGTCTGGTGGAGACCCAGGTGAAGGCCAGGAGGAGGAAGAAAGGGGTACAAAAGGGAGAGCAGTGTCTCCCCAACTCACAGCCTGAGCCAGAAGAGGATTCAGCTGTATGGAGCTGCCCCTGACCACTCAGCTACAGACCCCTGTGCATCACCACCTCTCTACCTGGACAGGCTCACGTGCCTACCCTCTACGGCAGTGGAGGCGGGAGACTGCCTTCCAGAGCCCCTACTCCTTGACAGAGCTCCTCTGCTCTCCCAGCGCATCTGATAGTGACCTAGCACCTATGGGGAGCAGGAATTCGGCATCTCCAGAAGCTGTCCCAAGAGCTGGATGAAGCCATTATGGCGGAAGAGAGTGGTGAAATGACACTCTCATTCATGACTGAGGAAGTGCCCTGCAGGAAACAAGCCCTGTCTGACCACCAAGGCTTCGTACCCCAGAATGTCTGTGCTTCCCCATGA</dnaseq>| | sequence = <dnaseq>ATGCACCGGAGATCTCTCCAGCACCAGGAGCAGCCGCTGGACAGCAAGGAGCGGCAGCCTATGGTTAGCCATTGGGAGATCTCCGCCAGGGCCCTGGGTTCTCTGTGCAGACAGTTCCAAAGAAGGCTGCCCCTAAGAGCCGTCAACCTCAACCTCCGGACAGGTACCTCCTAGAAACCCCTAGAAACCAGGGTCAGGGCAGTAAGAGACTCCAGGCTGCAGCTCGCTCAGCTAAGAGCACCCTGGGTGCCATGTCACAGAGAATCCAGGAGTCCTGCCAAAGTAGCACCAAGTGTCTGGTGGAGACCCAGGTGAAGGCCAGGAGGAGGAAGAAAGGGGTACAAAAGGGAGAGCAGTGTCTCCCCAACTCACAGCCTGAGCCAGAAGAGGATTCAGCTGTATGGAGCTGCCCCTGACCACTCAGCTACAGACCCCTGTGCATCACCACCTCTCTACCTGGACAGGCTCACGTGCCTACCCTCTACGGCAGTGGAGGCGGGAGACTGCCTTCCAGAGCCCCTACTCCTTGACAGAGCTCCTCTGCTCTCCCAGCGCATCTGATAGTGACCTAGCACCTATGGGGAGCAGGAATTCGGCATCTCCAGAAGCTGTCCCAAGAGCTGGATGAAGCCATTATGGCGGAAGAGAGTGGTGAAATGACACTCTCATTCATGACTGAGGAAGTGCCCTGCAGGAAACAAGCCCTGTCTGACCACCAAGGCTTCGTACCCCAGAATGTCTGTGCTTCCCCATGA</dnaseq>| | ||
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| − | [[Category:Intronic(AS)]] | + | [[Category:Intronic(AS)]][[Category:NONHSAG044344]] |
Revision as of 11:55, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT113962 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intronic(AS) |
| Length |
755 nt |
| Genomic location |
chr6+:90524428..90525182 |
| Exon number |
1 |
| Exons |
90524428..90525182 |
| Genome context |
|
| Sequence |
000001 ATGCACCGGA GATCTCTCCA GCACCAGGAG CAGCCGCTGG ACAGCAAGGA GCGGCAGCCT ATGGTTAGCC ATTGGGAGAT 000080
000081 CTCCGCCAGG GCCCTGGGTT CTCTGTGCAG ACAGTTCCAA AGAAGGCTGC CCCTAAGAGC CGTCAACCTC AACCTCCGGA 000160 000161 CAGGTACCTC CTAGAAACCC CTAGAAACCA GGGTCAGGGC AGTAAGAGAC TCCAGGCTGC AGCTCGCTCA GCTAAGAGCA 000240 000241 CCCTGGGTGC CATGTCACAG AGAATCCAGG AGTCCTGCCA AAGTAGCACC AAGTGTCTGG TGGAGACCCA GGTGAAGGCC 000320 000321 AGGAGGAGGA AGAAAGGGGT ACAAAAGGGA GAGCAGTGTC TCCCCAACTC ACAGCCTGAG CCAGAAGAGG ATTCAGCTGT 000400 000401 ATGGAGCTGC CCCTGACCAC TCAGCTACAG ACCCCTGTGC ATCACCACCT CTCTACCTGG ACAGGCTCAC GTGCCTACCC 000480 000481 TCTACGGCAG TGGAGGCGGG AGACTGCCTT CCAGAGCCCC TACTCCTTGA CAGAGCTCCT CTGCTCTCCC AGCGCATCTG 000560 000561 ATAGTGACCT AGCACCTATG GGGAGCAGGA ATTCGGCATC TCCAGAAGCT GTCCCAAGAG CTGGATGAAG CCATTATGGC 000640 000641 GGAAGAGAGT GGTGAAATGA CACTCTCATT CATGACTGAG GAAGTGCCCT GCAGGAAACA AGCCCTGTCT GACCACCAAG 000720 000721 GCTTCGTACC CCAGAATGTC TGTGCTTCCC CATGA |
Predicted Small Protein
| Name | NONHSAT113962_smProtein_251:415 |
| Length | 55 |
| Molecular weight | 6106.8404 |
| Aromaticity | 0.0185185185185 |
| Instability index | 111.125925926 |
| Isoelectric point | 8.45867919922 |
| Runs | 10 |
| Runs residual | 0.0224932249322 |
| Runs probability | 0.0479243949832 |
| Amino acid sequence | MSQRIQESCQSSTKCLVETQVKARRRKKGVQKGEQCLPNSQPEPEEDSAVWSCP |
| Secondary structure | LLLHHHHHHLLLLLEEEHHHHHHHHHHLLLLLLLEELLLLLLLLLLLLLEELLL |
| PRMN | - |
| PiMo | - |
