Difference between revisions of "NONHSAT115382"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TCTCCTTGCCTTAGGGCAGAGAGGAGTTACCAGCAGAAAGACTGGCAGCATTGCCTGCTGTCTCCTGCTCACCATTGCTGATGATTGGCATTTGTATTTCAATATGGCGTCCGTGCTCTGGAAAGGAATAATCTGGAAAGATGACTGGGAAGTAGATGGTTTGCCTGTGTCATCACCACGTTTTCCCTGTTCCCTGGGGTGGTGTACCTGCTCTTGCAATATTCTCTAATTTCTGGATGAACCTGGCTTTGGAAGGTACTGTGCTGTAGGTTTTTCCAGGAGTTTTGTTTGCTTTGGAGTTTCTTAACAACCATCATTGCCTTGGAGGCTTTGTCAACATTTTGGGCTTCCTTGTCCTCAATAGATTTGCTTGTTGGGCCACACTTGTGCCTTTTCACTTATTCTCACCAGGGACTTCCTTCACTGGGCATCTGGCTGGGATTCTTCTTGCATTAATGCACACTCAAGGGCCTCTGAAGAACATCATGGAAGCATGTGCTGGCATTTTTTTCCCTCCAATTATTGGTTATCCAGGACAGTGATATTACTTCAATTGTTCAGGCTAGTCTGGATATCAGGATCATTATCTTTATGGCAGGCCAGGTTATTATGAAGAAGCACCCAGGAGCTATGATACATACACAGCAGTACGGAGAGAAAAAGAACAGCTTGTGAGAGCATGAAGAGCCAGCCCCTGGGATCAAGAAAATACCAGGAATAGCTCACTGCCCTGCGGGCTTCTTCTCTCAGAAGAAATGAGACTATAATGGCTTCACAGGTTTGATAGCCAGTGA</dnaseq>| | sequence = <dnaseq>TCTCCTTGCCTTAGGGCAGAGAGGAGTTACCAGCAGAAAGACTGGCAGCATTGCCTGCTGTCTCCTGCTCACCATTGCTGATGATTGGCATTTGTATTTCAATATGGCGTCCGTGCTCTGGAAAGGAATAATCTGGAAAGATGACTGGGAAGTAGATGGTTTGCCTGTGTCATCACCACGTTTTCCCTGTTCCCTGGGGTGGTGTACCTGCTCTTGCAATATTCTCTAATTTCTGGATGAACCTGGCTTTGGAAGGTACTGTGCTGTAGGTTTTTCCAGGAGTTTTGTTTGCTTTGGAGTTTCTTAACAACCATCATTGCCTTGGAGGCTTTGTCAACATTTTGGGCTTCCTTGTCCTCAATAGATTTGCTTGTTGGGCCACACTTGTGCCTTTTCACTTATTCTCACCAGGGACTTCCTTCACTGGGCATCTGGCTGGGATTCTTCTTGCATTAATGCACACTCAAGGGCCTCTGAAGAACATCATGGAAGCATGTGCTGGCATTTTTTTCCCTCCAATTATTGGTTATCCAGGACAGTGATATTACTTCAATTGTTCAGGCTAGTCTGGATATCAGGATCATTATCTTTATGGCAGGCCAGGTTATTATGAAGAAGCACCCAGGAGCTATGATACATACACAGCAGTACGGAGAGAAAAAGAACAGCTTGTGAGAGCATGAAGAGCCAGCCCCTGGGATCAAGAAAATACCAGGAATAGCTCACTGCCCTGCGGGCTTCTTCTCTCAGAAGAAATGAGACTATAATGGCTTCACAGGTTTGATAGCCAGTGA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intronic(S)]] | + | [[Category:Intronic(S)]][[Category:NONHSAG045060]] |
Revision as of 12:28, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT115382 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intronic(S) |
| Length |
794 nt |
| Genomic location |
chr6+:144719095..144719888 |
| Exon number |
1 |
| Exons |
144719095..144719888 |
| Genome context |
|
| Sequence |
000001 TCTCCTTGCC TTAGGGCAGA GAGGAGTTAC CAGCAGAAAG ACTGGCAGCA TTGCCTGCTG TCTCCTGCTC ACCATTGCTG 000080
000081 ATGATTGGCA TTTGTATTTC AATATGGCGT CCGTGCTCTG GAAAGGAATA ATCTGGAAAG ATGACTGGGA AGTAGATGGT 000160 000161 TTGCCTGTGT CATCACCACG TTTTCCCTGT TCCCTGGGGT GGTGTACCTG CTCTTGCAAT ATTCTCTAAT TTCTGGATGA 000240 000241 ACCTGGCTTT GGAAGGTACT GTGCTGTAGG TTTTTCCAGG AGTTTTGTTT GCTTTGGAGT TTCTTAACAA CCATCATTGC 000320 000321 CTTGGAGGCT TTGTCAACAT TTTGGGCTTC CTTGTCCTCA ATAGATTTGC TTGTTGGGCC ACACTTGTGC CTTTTCACTT 000400 000401 ATTCTCACCA GGGACTTCCT TCACTGGGCA TCTGGCTGGG ATTCTTCTTG CATTAATGCA CACTCAAGGG CCTCTGAAGA 000480 000481 ACATCATGGA AGCATGTGCT GGCATTTTTT TCCCTCCAAT TATTGGTTAT CCAGGACAGT GATATTACTT CAATTGTTCA 000560 000561 GGCTAGTCTG GATATCAGGA TCATTATCTT TATGGCAGGC CAGGTTATTA TGAAGAAGCA CCCAGGAGCT ATGATACATA 000640 000641 CACAGCAGTA CGGAGAGAAA AAGAACAGCT TGTGAGAGCA TGAAGAGCCA GCCCCTGGGA TCAAGAAAAT ACCAGGAATA 000720 000721 GCTCACTGCC CTGCGGGCTT CTTCTCTCAG AAGAAATGAG ACTATAATGG CTTCACAGGT TTGATAGCCA GTGA |
Predicted Small Protein
| Name | NONHSAT115382_smProtein_155:268 |
| Length | 38 |
| Molecular weight | 4107.8864 |
| Aromaticity | 0.135135135135 |
| Instability index | 49.5702702703 |
| Isoelectric point | 6.20391845703 |
| Runs | 5 |
| Runs residual | 0.0446317877511 |
| Runs probability | 0.0209856915739 |
| Amino acid sequence | MVCLCHHHVFPVPWGGVPALAIFSNFWMNLALEGTVL |
| Secondary structure | LEEELLLLLLLLLLLLLHHHHHHHHHHHHHHHHLLLL |
| PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL |
| PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiiiiii |
