Difference between revisions of "NONHSAT125736"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CTGCTTGGCAAATGGTTTGACAAATGGACAGACTCTCAAAGAAGAAGAATCCTCACAGGCCTGTTGGAGCGCTGCTCGCTGTCCCAGCAAAAGTTCTGCTGTCGAAAGCTTCAAGAGAAAATTCCAGCAGAAGCCCTGGACTTTACAACCAAGCTTCCAAGGGTGTTATCTTTATACATCTTTTCTTTCCTGGACCCTCGGAGCCTTTGTCGTTGTGCACAGGTGTGCTGGCATTGGAAGAACCTTGCTGAGCTGGACCAGCTCTGGATGCTGAAATGTTTACGGTTTAACTGGTACATCAATTTCTCTCCAACTCCCTTTGAGCAGGGGATCTGGAAGAAGCACTATATTCAAATGGTGAAAGAACTTCATATTACCAAGCCTAAGGTGAATTTTAGACAGAAAGCCACAAGCTTGCAAACATTGGCTCTTTGCAAATTCTAGAACTAAGAATAAAGGATCAGACTGGAAGTTGGGGAAGGGAGGTAGTTCAAA</dnaseq>| | sequence = <dnaseq>CTGCTTGGCAAATGGTTTGACAAATGGACAGACTCTCAAAGAAGAAGAATCCTCACAGGCCTGTTGGAGCGCTGCTCGCTGTCCCAGCAAAAGTTCTGCTGTCGAAAGCTTCAAGAGAAAATTCCAGCAGAAGCCCTGGACTTTACAACCAAGCTTCCAAGGGTGTTATCTTTATACATCTTTTCTTTCCTGGACCCTCGGAGCCTTTGTCGTTGTGCACAGGTGTGCTGGCATTGGAAGAACCTTGCTGAGCTGGACCAGCTCTGGATGCTGAAATGTTTACGGTTTAACTGGTACATCAATTTCTCTCCAACTCCCTTTGAGCAGGGGATCTGGAAGAAGCACTATATTCAAATGGTGAAAGAACTTCATATTACCAAGCCTAAGGTGAATTTTAGACAGAAAGCCACAAGCTTGCAAACATTGGCTCTTTGCAAATTCTAGAACTAAGAATAAAGGATCAGACTGGAAGTTGGGGAAGGGAGGTAGTTCAAA</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG049851]] |
Revision as of 09:22, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT125736 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
495 nt |
| Genomic location |
chr8-:28314175..28331303 |
| Exon number |
3 |
| Exons |
28314175..28314447,28321129..28321335,28331289..28331303 |
| Genome context |
|
| Sequence |
000001 CTGCTTGGCA AATGGTTTGA CAAATGGACA GACTCTCAAA GAAGAAGAAT CCTCACAGGC CTGTTGGAGC GCTGCTCGCT 000080
000081 GTCCCAGCAA AAGTTCTGCT GTCGAAAGCT TCAAGAGAAA ATTCCAGCAG AAGCCCTGGA CTTTACAACC AAGCTTCCAA 000160 000161 GGGTGTTATC TTTATACATC TTTTCTTTCC TGGACCCTCG GAGCCTTTGT CGTTGTGCAC AGGTGTGCTG GCATTGGAAG 000240 000241 AACCTTGCTG AGCTGGACCA GCTCTGGATG CTGAAATGTT TACGGTTTAA CTGGTACATC AATTTCTCTC CAACTCCCTT 000320 000321 TGAGCAGGGG ATCTGGAAGA AGCACTATAT TCAAATGGTG AAAGAACTTC ATATTACCAA GCCTAAGGTG AATTTTAGAC 000400 000401 AGAAAGCCAC AAGCTTGCAA ACATTGGCTC TTTGCAAATT CTAGAACTAA GAATAAAGGA TCAGACTGGA AGTTGGGGAA 000480 000481 GGGAGGTAGT TCAAA |
Predicted Small Protein
| Name | NONHSAT125736_smProtein_23:250 |
| Length | 76 |
| Molecular weight | 8070.3762 |
| Aromaticity | 0.0533333333333 |
| Instability index | 53.6786666667 |
| Isoelectric point | 9.69488525391 |
| Runs | 9 |
| Runs residual | 0.0289361702128 |
| Runs probability | 0.0428271408664 |
| Amino acid sequence | MDRLSKKKNPHRPVGALLAVPAKVLLSKASRENSSRSPGLYNQASKGVIFIHLFFPGPSE PLSLCTGVLALEEPC |
| Secondary structure | LLLLLLLLLLLLLLLHHHHLLHHHHHLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLL LLLLLLLLEEELLLL |
| PRMN | - |
| PiMo | - |
