Difference between revisions of "NONHSAT129967"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AAAATGGGCTTCAGAGTCTGATGGATctgggtgactgggcaagttctttagcttgtcaaaccttcatttctctaatttataacataaggacagtaccttcttcctgtcaaggttgaggcaagcattagtgagaaacgtctcaaggcctggttcacaGTTAAAGGTCAAAAAAGAGAGAAAACATCACTGTTCTCTTCAGCAGAACTTTTGTCAGTGTGATCGAGAATTGTCTCAAGTGACAAGTGAGCTGACCAGGggaaccctgggtggcaggtactattggcaccattttccagataaagaaaatgaagttctaagcagtcaaatgacatgtcaagatcacccaactgggaaaaggtgcttttacatgaaagatggtgattagctgatcttttaccagaaggagaagaGATATGAAAGGCAAGATTCAAGGATCACACCAACTAGAGgagactactgcccttcattgattgatgtccggtgcctggaaagccatggttttatgcagtttgtggattttttattttttttctttatttgaaatgggaagGGATCACATTACATCGAACAGAAACTGTTTTACCTTGCTTGCAAGGAGGTGGAGGCCTCCTTGCCCCCAAGTGTGGTGCCACTTCCGGGTTCCTTGAGCACTTCCAGGTTATCAGCCCAGCTCTCCTCCAGTTTCTGGGGCTGCTGAAGAAGCTGTTGGGG</dnaseq>| | sequence = <dnaseq>AAAATGGGCTTCAGAGTCTGATGGATctgggtgactgggcaagttctttagcttgtcaaaccttcatttctctaatttataacataaggacagtaccttcttcctgtcaaggttgaggcaagcattagtgagaaacgtctcaaggcctggttcacaGTTAAAGGTCAAAAAAGAGAGAAAACATCACTGTTCTCTTCAGCAGAACTTTTGTCAGTGTGATCGAGAATTGTCTCAAGTGACAAGTGAGCTGACCAGGggaaccctgggtggcaggtactattggcaccattttccagataaagaaaatgaagttctaagcagtcaaatgacatgtcaagatcacccaactgggaaaaggtgcttttacatgaaagatggtgattagctgatcttttaccagaaggagaagaGATATGAAAGGCAAGATTCAAGGATCACACCAACTAGAGgagactactgcccttcattgattgatgtccggtgcctggaaagccatggttttatgcagtttgtggattttttattttttttctttatttgaaatgggaagGGATCACATTACATCGAACAGAAACTGTTTTACCTTGCTTGCAAGGAGGTGGAGGCCTCCTTGCCCCCAAGTGTGGTGCCACTTCCGGGTTCCTTGAGCACTTCCAGGTTATCAGCCCAGCTCTCCTCCAGTTTCTGGGGCTGCTGAAGAAGCTGTTGGGG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG051629]] |
Revision as of 10:59, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129967 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
711 nt |
Genomic location |
chr9+:1298276..1328584 |
Exon number |
7 |
Exons |
1298276..1298431,1299313..1299412,1310939..1311032,1312840..1312899,1321456..1321494,1327073..1327173,1328424..1328584 |
Genome context |
|
Sequence |
000001 AAAATGGGCT TCAGAGTCTG ATGGATctgg gtgactgggc aagttcttta gcttgtcaaa ccttcatttc tctaatttat 000080
000081 aacataagga cagtaccttc ttcctgtcaa ggttgaggca agcattagtg agaaacgtct caaggcctgg ttcacaGTTA 000160 000161 AAGGTCAAAA AAGAGAGAAA ACATCACTGT TCTCTTCAGC AGAACTTTTG TCAGTGTGAT CGAGAATTGT CTCAAGTGAC 000240 000241 AAGTGAGCTG ACCAGGggaa ccctgggtgg caggtactat tggcaccatt ttccagataa agaaaatgaa gttctaagca 000320 000321 gtcaaatgac atgtcaagat cacccaactg ggaaaaggtg cttttacatg aaagatggtg attagctgat cttttaccag 000400 000401 aaggagaaga GATATGAAAG GCAAGATTCA AGGATCACAC CAACTAGAGg agactactgc ccttcattga ttgatgtccg 000480 000481 gtgcctggaa agccatggtt ttatgcagtt tgtggatttt ttattttttt tctttatttg aaatgggaag GGATCACATT 000560 000561 ACATCGAACA GAAACTGTTT TACCTTGCTT GCAAGGAGGT GGAGGCCTCC TTGCCCCCAA GTGTGGTGCC ACTTCCGGGT 000640 000641 TCCTTGAGCA CTTCCAGGTT ATCAGCCCAG CTCTCCTCCA GTTTCTGGGG CTGCTGAAGA AGCTGTTGGG G |
Predicted Small Protein
Name | NONHSAT129967_smProtein_473:646 |
Length | 58 |
Molecular weight | 6911.1417 |
Aromaticity | 0.19298245614 |
Instability index | 73.5335087719 |
Isoelectric point | 9.68743896484 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0425719837485 |
Amino acid sequence | MSGAWKAMVLCSLWIFYFFSLFEMGRDHITSNRNCFTLLARRWRPPCPQVWCHFRVP |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHLLLLLLEEEEEELL |
PRMN | - |
PiMo | - |