Difference between revisions of "NONHSAT131906"

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sequence = <dnaseq>GGGAAAAGAAATTTGAATGCAAATCAAATTGGATTTTTTTCTGGAAATGTTCTGTTTAAGTCTGTGAGGAAGTCACTGCAGCTGTGATTAAAACTTATTTTCTTATATTTGATCAGAAATAAAAGTCCCTCTCCTTTTCAAAAGGGGTTTGTTATGAAGGAACTTTACAACACTTCCAATCCCATTTAGTTATTCATTCAAGAGCCATTGCCTTTCACCAGGGCAATATTAGCAGAATTGGAAGTGTAACAAATACATAAAATAATCAGTGGGTCGAATGAGAGGGAGATCACAGAGACAATGAGGGAAGACAGCTCTTTATACAAGATTTCTAGTAAAGAAAAGGAGGATCCAAATCATGAGCTGAAGAATCCCTGGCAGCCTCAATGGGTGAAGAGAGGTTTTAATGAAGCATCAAAGCAAGGGATGGGGCATCTTTTGCCTTTTGAGGAAAAGGGCATTTAATATTCATGtgtttctcagtgagcaggtctatgcaaacctacctccaaagtcagaggaagctgagaggcctaagaaagaggctgacaaatcccattttttagaatcaaacatttcgcagggatttaggaacagaagccatgtctgtgtctcaagcagtgttgagataagatactggatccccatgccattgtccctcagacctagggcttatataacatagggaagtggtgactcagaaggcatgtgtaggacaactgcagtacaataatatcaaggttaatttgacctaagggcaggatttatggtaagcacctgctcttacataagaaacaatagatgaactgaaaatcgtagcagcttcccagagcaggaattaatcagaagtcaacatgttgaattagcatccacagtggagctgccttggcctgcacaTCATCTTTGCAAGAGAGCTATTCTTGTATTGACTTCATGATCTCTTGTTTTGCCTTCAAGCTTCCTTAAAATCCATGGTTTTtgtcatttaaaaaaacaagcagggtaaggagttatggaggaaaggtggagaaatgttattttagatagcagtcagaaaaagcttgtgcgaggggagatacttcagcagtaatcataatgaaatgagggaacaagacatgcagatgactaataagagcactccaCCTctgggcacagtagctcatgcctgtaataccagcactttgggagggcgaggtgggccaatcacctgaggtcaggagttcgaggccagccctaccaacatgctgaaaatcgcgccactgcactccagcctgggtgacagagagagactccacctcaagaaaaaaataagaaagtggagagtaaaaaacaacttcatgtttggtgcctgagcaaattagaagttacgaattaatttgctgagacagggaagcttggaggagaaatgcttgtacacatggggaatcaagtattctttggacatgctgagtttgagatgcgcttaagctttcaaattggaatgtggatttagaagttggatatatgaatgtggggttcagtagagggtatattctcaggattaaaagtatggagtcatcagAAAGAAATAGATAATGTGGTGTGAGATTTTTCAGTCCTCTGCTTTTCAGGTATTTGCTAAGATGGCATTTCTTAGCTCTCTGTGGTTATGTGGAGCCTTGAAAATAGCTATGAGAGGAAGCTATTTTAGGCTGGACCATTTAACTTCAGTTCAGTATGAGAACTTCAAGATATCTTTTTGTTGTTGTTCCTGTGGTTGTCTCctgacagttctccagatggtggctgctccatctgtctgggtcccagattaaggacaacttatagcataactcccagctgactcacaatgatatagcatgagtgagaaatcgaccttgccatcttggtttcctgaaatacgggagttatttgttattgcatcatagcctagcccatcctgaAAAATACCAGAAATAAAtaacgctgtaggactgagtgagatcacccaaggagtgaatatggaaagaagaaagaagaattccaaggattgagccatggcatactctgacagtcactaatcagaaaatgaagaggatgaagattaggcaaagggacagaTTATGAATCATTTATTTATTTTCTAAAACACCATTATTACCGTTATTATTTATTTTTTGTTTCAAAATTGATAACAATTTAATAAAAGCACTTTTCCCCGGACAGCGGAAGAAAACACTTGTTTAAAAACCAAGTAGAACCAATTATAGCACGCATTTGTCTGTATAACTAAAAGAGTATTTCTGTATCAAAATAAGTCGAGTGTAAAGCCTATTTACTTTCAGTTTATACAGATTCCTCTAAAACAATTTTGACTACTGAGGCTGATGTATCCACAAGATGAAGCCTAAGTCATAAAATCTGCTTAACTTCATCATTTCTTCAATATATTTGAAGTTGTGGTAAAACTTTATGGCAAATTTTAGTATGTAGCATAGTCTAGTATATCATAGTCCAGTAACATTTAATAGCATataccaggtttttgactgaatttcctattttactcattgcagggtcattttgatttccttaatttaattatatatctctgaaCTTCAGTTCTACATAAACTGAATCATTTGGAGCAACAGGTATTTGTTGCCCAGGTGATAGCCTGAAGAAAGACAAATTGGCcacacacacacacacacacacacacacacacGCCCCGTAACTATTTAAACTCTATAATATACACTGAGCAATGTGCACACTTGGTTAATATaatttcattgtgtgatacatgataggcaaaaatgctggtcccatgtggattcatgacaaaatatagctgcctccgtggccgccttcccttgttaggttctgaaaagctttacaacaaatgtgaaaatgccatatttccatcagtgacaggtatcagcttcatttataaatgtatattttgaaactattttacagctcttcttcctatgcaagaaagtttatttcaaggctgtcataatttgatctttttgaagacaatttaatttacacatatgaatccaaattcctattaagaaattaactgcctgtcataatactaatgaaaataaccctcctaaggtggccactgatgaacacatgaacatctttaacaagggtaagcacacacagacagatggtgacaattgtgtcaagggtgtactccttcccagcaaggtgtaagttttctttggatgttgattttaaaaccaaccccaatttcaaaaacattgaaatatTTTTAATGAATAAAACTTTTGATTGTTTGAATATTCCCCATCATCTCTCTCGTCTCATTGCTAAAATGGTTTCTGGTTTTCTTTGGTTTCCTTTTCTCTGACCCCACCCATATGGGATAAACCAGCTATTGCCAGCTTAATTTGGGGGGTTTTGTGATGCTAAGTCATAAAGAGGGAAGGGTCGAAGAGCAAAGTGAAAGGGTGGAAGGAGAGGTGTACAAAGCCTAGGGACAAGAACTGGTGTGGTTGGAGGGGGATTGGTAACAGAAGAGTAATCAGCAGGTGTGAGTAAAAACTAGGTGAGATGAAAGAAGAATGACTAAATGTCAGGAATTGGATCTCCTTTCTAGACTTTTAGAAGTACAAGTGAAAAATGGAGTTCATTTTGACCTGTTTGGACATTGTCTCTTTAAAGAAAACTGAACTAGGCTGTTTATTTTTTCAATCatttattcactcaacaattttttattgagctcctactatatgccaagcattttctttggttcaaggaatatggtagtaaacgaaacagcctggttttcaaggagcttatgtgtaggaaagcattaattaaacaaatgaattagtaaagcatatggtagaaagtgatacattggctaaaaaaaaaggca</dnaseq>|
 
sequence = <dnaseq>GGGAAAAGAAATTTGAATGCAAATCAAATTGGATTTTTTTCTGGAAATGTTCTGTTTAAGTCTGTGAGGAAGTCACTGCAGCTGTGATTAAAACTTATTTTCTTATATTTGATCAGAAATAAAAGTCCCTCTCCTTTTCAAAAGGGGTTTGTTATGAAGGAACTTTACAACACTTCCAATCCCATTTAGTTATTCATTCAAGAGCCATTGCCTTTCACCAGGGCAATATTAGCAGAATTGGAAGTGTAACAAATACATAAAATAATCAGTGGGTCGAATGAGAGGGAGATCACAGAGACAATGAGGGAAGACAGCTCTTTATACAAGATTTCTAGTAAAGAAAAGGAGGATCCAAATCATGAGCTGAAGAATCCCTGGCAGCCTCAATGGGTGAAGAGAGGTTTTAATGAAGCATCAAAGCAAGGGATGGGGCATCTTTTGCCTTTTGAGGAAAAGGGCATTTAATATTCATGtgtttctcagtgagcaggtctatgcaaacctacctccaaagtcagaggaagctgagaggcctaagaaagaggctgacaaatcccattttttagaatcaaacatttcgcagggatttaggaacagaagccatgtctgtgtctcaagcagtgttgagataagatactggatccccatgccattgtccctcagacctagggcttatataacatagggaagtggtgactcagaaggcatgtgtaggacaactgcagtacaataatatcaaggttaatttgacctaagggcaggatttatggtaagcacctgctcttacataagaaacaatagatgaactgaaaatcgtagcagcttcccagagcaggaattaatcagaagtcaacatgttgaattagcatccacagtggagctgccttggcctgcacaTCATCTTTGCAAGAGAGCTATTCTTGTATTGACTTCATGATCTCTTGTTTTGCCTTCAAGCTTCCTTAAAATCCATGGTTTTtgtcatttaaaaaaacaagcagggtaaggagttatggaggaaaggtggagaaatgttattttagatagcagtcagaaaaagcttgtgcgaggggagatacttcagcagtaatcataatgaaatgagggaacaagacatgcagatgactaataagagcactccaCCTctgggcacagtagctcatgcctgtaataccagcactttgggagggcgaggtgggccaatcacctgaggtcaggagttcgaggccagccctaccaacatgctgaaaatcgcgccactgcactccagcctgggtgacagagagagactccacctcaagaaaaaaataagaaagtggagagtaaaaaacaacttcatgtttggtgcctgagcaaattagaagttacgaattaatttgctgagacagggaagcttggaggagaaatgcttgtacacatggggaatcaagtattctttggacatgctgagtttgagatgcgcttaagctttcaaattggaatgtggatttagaagttggatatatgaatgtggggttcagtagagggtatattctcaggattaaaagtatggagtcatcagAAAGAAATAGATAATGTGGTGTGAGATTTTTCAGTCCTCTGCTTTTCAGGTATTTGCTAAGATGGCATTTCTTAGCTCTCTGTGGTTATGTGGAGCCTTGAAAATAGCTATGAGAGGAAGCTATTTTAGGCTGGACCATTTAACTTCAGTTCAGTATGAGAACTTCAAGATATCTTTTTGTTGTTGTTCCTGTGGTTGTCTCctgacagttctccagatggtggctgctccatctgtctgggtcccagattaaggacaacttatagcataactcccagctgactcacaatgatatagcatgagtgagaaatcgaccttgccatcttggtttcctgaaatacgggagttatttgttattgcatcatagcctagcccatcctgaAAAATACCAGAAATAAAtaacgctgtaggactgagtgagatcacccaaggagtgaatatggaaagaagaaagaagaattccaaggattgagccatggcatactctgacagtcactaatcagaaaatgaagaggatgaagattaggcaaagggacagaTTATGAATCATTTATTTATTTTCTAAAACACCATTATTACCGTTATTATTTATTTTTTGTTTCAAAATTGATAACAATTTAATAAAAGCACTTTTCCCCGGACAGCGGAAGAAAACACTTGTTTAAAAACCAAGTAGAACCAATTATAGCACGCATTTGTCTGTATAACTAAAAGAGTATTTCTGTATCAAAATAAGTCGAGTGTAAAGCCTATTTACTTTCAGTTTATACAGATTCCTCTAAAACAATTTTGACTACTGAGGCTGATGTATCCACAAGATGAAGCCTAAGTCATAAAATCTGCTTAACTTCATCATTTCTTCAATATATTTGAAGTTGTGGTAAAACTTTATGGCAAATTTTAGTATGTAGCATAGTCTAGTATATCATAGTCCAGTAACATTTAATAGCATataccaggtttttgactgaatttcctattttactcattgcagggtcattttgatttccttaatttaattatatatctctgaaCTTCAGTTCTACATAAACTGAATCATTTGGAGCAACAGGTATTTGTTGCCCAGGTGATAGCCTGAAGAAAGACAAATTGGCcacacacacacacacacacacacacacacacGCCCCGTAACTATTTAAACTCTATAATATACACTGAGCAATGTGCACACTTGGTTAATATaatttcattgtgtgatacatgataggcaaaaatgctggtcccatgtggattcatgacaaaatatagctgcctccgtggccgccttcccttgttaggttctgaaaagctttacaacaaatgtgaaaatgccatatttccatcagtgacaggtatcagcttcatttataaatgtatattttgaaactattttacagctcttcttcctatgcaagaaagtttatttcaaggctgtcataatttgatctttttgaagacaatttaatttacacatatgaatccaaattcctattaagaaattaactgcctgtcataatactaatgaaaataaccctcctaaggtggccactgatgaacacatgaacatctttaacaagggtaagcacacacagacagatggtgacaattgtgtcaagggtgtactccttcccagcaaggtgtaagttttctttggatgttgattttaaaaccaaccccaatttcaaaaacattgaaatatTTTTAATGAATAAAACTTTTGATTGTTTGAATATTCCCCATCATCTCTCTCGTCTCATTGCTAAAATGGTTTCTGGTTTTCTTTGGTTTCCTTTTCTCTGACCCCACCCATATGGGATAAACCAGCTATTGCCAGCTTAATTTGGGGGGTTTTGTGATGCTAAGTCATAAAGAGGGAAGGGTCGAAGAGCAAAGTGAAAGGGTGGAAGGAGAGGTGTACAAAGCCTAGGGACAAGAACTGGTGTGGTTGGAGGGGGATTGGTAACAGAAGAGTAATCAGCAGGTGTGAGTAAAAACTAGGTGAGATGAAAGAAGAATGACTAAATGTCAGGAATTGGATCTCCTTTCTAGACTTTTAGAAGTACAAGTGAAAAATGGAGTTCATTTTGACCTGTTTGGACATTGTCTCTTTAAAGAAAACTGAACTAGGCTGTTTATTTTTTCAATCatttattcactcaacaattttttattgagctcctactatatgccaagcattttctttggttcaaggaatatggtagtaaacgaaacagcctggttttcaaggagcttatgtgtaggaaagcattaattaaacaaatgaattagtaaagcatatggtagaaagtgatacattggctaaaaaaaaaggca</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:NONHSAG052578]]

Revision as of 11:46, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT131906

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3898 nt

Genomic location

chr9+:76225463..76230453

Exon number

2

Exons

76225463..76226712,76227806..76230453

Genome context

Sequence
000001 GGGAAAAGAA ATTTGAATGC AAATCAAATT GGATTTTTTT CTGGAAATGT TCTGTTTAAG TCTGTGAGGA AGTCACTGCA 000080
000081 GCTGTGATTA AAACTTATTT TCTTATATTT GATCAGAAAT AAAAGTCCCT CTCCTTTTCA AAAGGGGTTT GTTATGAAGG 000160
000161 AACTTTACAA CACTTCCAAT CCCATTTAGT TATTCATTCA AGAGCCATTG CCTTTCACCA GGGCAATATT AGCAGAATTG 000240
000241 GAAGTGTAAC AAATACATAA AATAATCAGT GGGTCGAATG AGAGGGAGAT CACAGAGACA ATGAGGGAAG ACAGCTCTTT 000320
000321 ATACAAGATT TCTAGTAAAG AAAAGGAGGA TCCAAATCAT GAGCTGAAGA ATCCCTGGCA GCCTCAATGG GTGAAGAGAG 000400
000401 GTTTTAATGA AGCATCAAAG CAAGGGATGG GGCATCTTTT GCCTTTTGAG GAAAAGGGCA TTTAATATTC ATGtgtttct 000480
000481 cagtgagcag gtctatgcaa acctacctcc aaagtcagag gaagctgaga ggcctaagaa agaggctgac aaatcccatt 000560
000561 ttttagaatc aaacatttcg cagggattta ggaacagaag ccatgtctgt gtctcaagca gtgttgagat aagatactgg 000640
000641 atccccatgc cattgtccct cagacctagg gcttatataa catagggaag tggtgactca gaaggcatgt gtaggacaac 000720
000721 tgcagtacaa taatatcaag gttaatttga cctaagggca ggatttatgg taagcacctg ctcttacata agaaacaata 000800
000801 gatgaactga aaatcgtagc agcttcccag agcaggaatt aatcagaagt caacatgttg aattagcatc cacagtggag 000880
000881 ctgccttggc ctgcacaTCA TCTTTGCAAG AGAGCTATTC TTGTATTGAC TTCATGATCT CTTGTTTTGC CTTCAAGCTT 000960
000961 CCTTAAAATC CATGGTTTTt gtcatttaaa aaaacaagca gggtaaggag ttatggagga aaggtggaga aatgttattt 001040
001041 tagatagcag tcagaaaaag cttgtgcgag gggagatact tcagcagtaa tcataatgaa atgagggaac aagacatgca 001120
001121 gatgactaat aagagcactc caCCTctggg cacagtagct catgcctgta ataccagcac tttgggaggg cgaggtgggc 001200
001201 caatcacctg aggtcaggag ttcgaggcca gccctaccaa catgctgaaa atcgcgccac tgcactccag cctgggtgac 001280
001281 agagagagac tccacctcaa gaaaaaaata agaaagtgga gagtaaaaaa caacttcatg tttggtgcct gagcaaatta 001360
001361 gaagttacga attaatttgc tgagacaggg aagcttggag gagaaatgct tgtacacatg gggaatcaag tattctttgg 001440
001441 acatgctgag tttgagatgc gcttaagctt tcaaattgga atgtggattt agaagttgga tatatgaatg tggggttcag 001520
001521 tagagggtat attctcagga ttaaaagtat ggagtcatca gAAAGAAATA GATAATGTGG TGTGAGATTT TTCAGTCCTC 001600
001601 TGCTTTTCAG GTATTTGCTA AGATGGCATT TCTTAGCTCT CTGTGGTTAT GTGGAGCCTT GAAAATAGCT ATGAGAGGAA 001680
001681 GCTATTTTAG GCTGGACCAT TTAACTTCAG TTCAGTATGA GAACTTCAAG ATATCTTTTT GTTGTTGTTC CTGTGGTTGT 001760
001761 CTCctgacag ttctccagat ggtggctgct ccatctgtct gggtcccaga ttaaggacaa cttatagcat aactcccagc 001840
001841 tgactcacaa tgatatagca tgagtgagaa atcgaccttg ccatcttggt ttcctgaaat acgggagtta tttgttattg 001920
001921 catcatagcc tagcccatcc tgaAAAATAC CAGAAATAAA taacgctgta ggactgagtg agatcaccca aggagtgaat 002000
002001 atggaaagaa gaaagaagaa ttccaaggat tgagccatgg catactctga cagtcactaa tcagaaaatg aagaggatga 002080
002081 agattaggca aagggacaga TTATGAATCA TTTATTTATT TTCTAAAACA CCATTATTAC CGTTATTATT TATTTTTTGT 002160
002161 TTCAAAATTG ATAACAATTT AATAAAAGCA CTTTTCCCCG GACAGCGGAA GAAAACACTT GTTTAAAAAC CAAGTAGAAC 002240
002241 CAATTATAGC ACGCATTTGT CTGTATAACT AAAAGAGTAT TTCTGTATCA AAATAAGTCG AGTGTAAAGC CTATTTACTT 002320
002321 TCAGTTTATA CAGATTCCTC TAAAACAATT TTGACTACTG AGGCTGATGT ATCCACAAGA TGAAGCCTAA GTCATAAAAT 002400
002401 CTGCTTAACT TCATCATTTC TTCAATATAT TTGAAGTTGT GGTAAAACTT TATGGCAAAT TTTAGTATGT AGCATAGTCT 002480
002481 AGTATATCAT AGTCCAGTAA CATTTAATAG CATataccag gtttttgact gaatttccta ttttactcat tgcagggtca 002560
002561 ttttgatttc cttaatttaa ttatatatct ctgaaCTTCA GTTCTACATA AACTGAATCA TTTGGAGCAA CAGGTATTTG 002640
002641 TTGCCCAGGT GATAGCCTGA AGAAAGACAA ATTGGCcaca cacacacaca cacacacaca cacacacGCC CCGTAACTAT 002720
002721 TTAAACTCTA TAATATACAC TGAGCAATGT GCACACTTGG TTAATATaat ttcattgtgt gatacatgat aggcaaaaat 002800
002801 gctggtccca tgtggattca tgacaaaata tagctgcctc cgtggccgcc ttcccttgtt aggttctgaa aagctttaca 002880
002881 acaaatgtga aaatgccata tttccatcag tgacaggtat cagcttcatt tataaatgta tattttgaaa ctattttaca 002960
002961 gctcttcttc ctatgcaaga aagtttattt caaggctgtc ataatttgat ctttttgaag acaatttaat ttacacatat 003040
003041 gaatccaaat tcctattaag aaattaactg cctgtcataa tactaatgaa aataaccctc ctaaggtggc cactgatgaa 003120
003121 cacatgaaca tctttaacaa gggtaagcac acacagacag atggtgacaa ttgtgtcaag ggtgtactcc ttcccagcaa 003200
003201 ggtgtaagtt ttctttggat gttgatttta aaaccaaccc caatttcaaa aacattgaaa tatTTTTAAT GAATAAAACT 003280
003281 TTTGATTGTT TGAATATTCC CCATCATCTC TCTCGTCTCA TTGCTAAAAT GGTTTCTGGT TTTCTTTGGT TTCCTTTTCT 003360
003361 CTGACCCCAC CCATATGGGA TAAACCAGCT ATTGCCAGCT TAATTTGGGG GGTTTTGTGA TGCTAAGTCA TAAAGAGGGA 003440
003441 AGGGTCGAAG AGCAAAGTGA AAGGGTGGAA GGAGAGGTGT ACAAAGCCTA GGGACAAGAA CTGGTGTGGT TGGAGGGGGA 003520
003521 TTGGTAACAG AAGAGTAATC AGCAGGTGTG AGTAAAAACT AGGTGAGATG AAAGAAGAAT GACTAAATGT CAGGAATTGG 003600
003601 ATCTCCTTTC TAGACTTTTA GAAGTACAAG TGAAAAATGG AGTTCATTTT GACCTGTTTG GACATTGTCT CTTTAAAGAA 003680
003681 AACTGAACTA GGCTGTTTAT TTTTTCAATC atttattcac tcaacaattt tttattgagc tcctactata tgccaagcat 003760
003761 tttctttggt tcaaggaata tggtagtaaa cgaaacagcc tggttttcaa ggagcttatg tgtaggaaag cattaattaa 003840
003841 acaaatgaat tagtaaagca tatggtagaa agtgatacat tggctaaaaa aaaaggca
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