Difference between revisions of "NONHSAT143632"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>CCCAGATGTGGTTCTCAACCTTCTAGGCTAAGAAACCGATGACACCCACCTTCCAGGAATGGGACCTCCTCCTCTCAAGGACAGACTCACTTAACCACATTTGTGAAATAAAAAAGGACAGTTTACAAATGTATAGTACTGTATATATCCAATTGTCATAAATATCCCAACACAACAAGCTCTGTCACTAAAATCATAATCGAACTATAAATGTATTAATTTACAGCGAGAATAACTTTTCCAGAAACTAGATATTTCAGAGTTTCAATACTGAGCTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCATATTGACTTAGAAAGCCAAGGAATAATGCAAAGGTTTTCTAGTGAGCGTTGAATCTGATCAAAGTAAAACGGATGAAACAAATGTACAATGGAAGTTCTTGCCAATGACCCCAAATC</dnaseq>| | sequence = <dnaseq>CCCAGATGTGGTTCTCAACCTTCTAGGCTAAGAAACCGATGACACCCACCTTCCAGGAATGGGACCTCCTCCTCTCAAGGACAGACTCACTTAACCACATTTGTGAAATAAAAAAGGACAGTTTACAAATGTATAGTACTGTATATATCCAATTGTCATAAATATCCCAACACAACAAGCTCTGTCACTAAAATCATAATCGAACTATAAATGTATTAATTTACAGCGAGAATAACTTTTCCAGAAACTAGATATTTCAGAGTTTCAATACTGAGCTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCATATTGACTTAGAAAGCCAAGGAATAATGCAAAGGTTTTCTAGTGAGCGTTGAATCTGATCAAAGTAAAACGGATGAAACAAATGTACAATGGAAGTTCTTGCCAATGACCCCAAATC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG019953]] |
Revision as of 07:32, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143632 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
431 nt |
Genomic location |
chr16-:73327765..73328195 |
Exon number |
1 |
Exons |
73327765..73328195 |
Genome context |
|
Sequence |
000001 CCCAGATGTG GTTCTCAACC TTCTAGGCTA AGAAACCGAT GACACCCACC TTCCAGGAAT GGGACCTCCT CCTCTCAAGG 000080
000081 ACAGACTCAC TTAACCACAT TTGTGAAATA AAAAAGGACA GTTTACAAAT GTATAGTACT GTATATATCC AATTGTCATA 000160 000161 AATATCCCAA CACAACAAGC TCTGTCACTA AAATCATAAT CGAACTATAA ATGTATTAAT TTACAGCGAG AATAACTTTT 000240 000241 CCAGAAACTA GATATTTCAG AGTTTCAATA CTGAGCTTTG TGGTTTTTTT TTTTTTTTTT TTTTTTTTTT GGCATATTGA 000320 000321 CTTAGAAAGC CAAGGAATAA TGCAAAGGTT TTCTAGTGAG CGTTGAATCT GATCAAAGTA AAACGGATGA AACAAATGTA 000400 000401 CAATGGAAGT TCTTGCCAAT GACCCCAAAT C |
Predicted Small Protein
Name | NONHSAT143632_smProtein_38:160 |
Length | 41 |
Molecular weight | 4749.397 |
Aromaticity | 0.1 |
Instability index | 53.48 |
Isoelectric point | 4.82635498047 |
Runs | 6 |
Runs residual | 0.0280241935484 |
Runs probability | 0.0475622681505 |
Amino acid sequence | MTPTFQEWDLLLSRTDSLNHICEIKKDSLQMYSTVYIQLS |
Secondary structure | LLLLHHHHHHHHHHLLLHHHHHHHHHHHHHHHEEEEEEEL |
PRMN | - |
PiMo | - |