Difference between revisions of "NONHSAT147912"
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==Annotated Information==
===Transcriptomic Nomeclature===
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG018382]] |
Revision as of 09:03, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT147912 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
1199 nt |
Genomic location |
chr16-:3072626..3074270 |
Exon number |
3 |
Exons |
3072626..3072999,3073234..3073969,3074182..3074270 |
Genome context |
|
Sequence |
000001 CGTGCCTAGA GCGGTTCCTC TCCGTGGCGC CCTACCGCCT TCGGCGCGAA GGTGGCTGGT GCGTACCGTC CCGAACCCTA 000080
000081 GGAGCCGAGA TCCCACCCGC AGGACCCCAA AACCCAATGA TCCTGCAGCA GCCCTTGCAG CGAGGCCCCC AGGGAGGGGC 000160 000161 CCAGCGCCTC CCGCGGGCCG CCTTGGGGGT GACTTGGGGC CTGGACGCCA GGTGCGTGTA GGGGACCAGG GTGGGCCTGA 000240 000241 CCAAGGGCCG CAGGAGCTTT GGCTGGGTGC TCAGGACTGG TCTGCAGGAT GAATACGGGG TGGGGCGAAT CGGCGGGGCT 000320 000321 TAGGCGTGAG CTGAGATGGG ACTGGGGCTG CGGCTGAGGG TCGAGACTTC CGAGGTACCC TGCTGGATGG TCCAGGAGAG 000400 000401 CGGGGACCGG CACCAGCTGA GACAGGAATG GGCTTGGGGC TCCTGGCTGA TGCTGCAGGC TTAGGCGGGC AGATCCTTGG 000480 000481 GAAGGGGCCA AGAGGGTGGG GTGCACCAGG CTCTCTTTTT TTCCCAGCTC CCCTCTCCGA GGAGCTGTGC CCATGAGCAC 000560 000561 CAAGCGGCGC CTGGAGGAGG AGCAGTGAGT TTGGGGGCAG GGAGGGACTC CCAACAAGAT CTCTGTCACC TCTGGTCCCC 000640 000641 AACAGGCTGC CTCCTGTGTC AGTATCCCAG CCTGCCTCTC TGCCATCTCT CCCCAGGGAG CCTCTGCGCA AGCAGTTTCT 000720 000721 GTCTGAGGAG AACATGGCCA CCCACTTCTC TCAACTCAGC CTGCACAATG ACCACCCCTA CTGCAGCCCC CCCATGACCT 000800 000801 TCTCCCCAGC CCTGCCCCCA CTCAGGAGCC CTTGCTCTGA GCTGCTTCTC TGGCGCTATC CTGGCAGCCT CATCCCTGAG 000880 000881 GCCCTCCGTC TGCTGAGGCT GGGGGACACC CCCAGTCCCC CCTACCCTGC AACCCCAGCT GGGGACATAA TGGAGCTCTG 000960 000961 AGTGCTGGTG GACAGTGCCC CTCCCACCTT CCTTCTTCCC CACAACAGAA GAGACCAGCG ACTCCCGCAA AGGGACAAGG 001040 001041 TTCCTCCCTC TCCTGCAGAG TAGGCATCTG GGCACCAAGA CCTTCCCTCA ACAGAGGACA CTGAGCCCAA CGGAGTTCTG 001120 001121 GGATGGGAGG GGTGGGAGCA TGGGAAGGGA GGCATCCCAC CCCCAAGAAG AACTGAATAA AGATTGCTGA GCAAAGGAA |
Predicted Small Protein
Name | NONHSAT147912_smProtein_335:463 |
Length | 43 |
Molecular weight | 4971.6787 |
Aromaticity | 0.0952380952381 |
Instability index | 64.3785714286 |
Isoelectric point | 5.57366943359 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0250334367981 |
Amino acid sequence | MGLGLRLRVETSEVPCWMVQESGDRHQLRQEWAWGSWLMLQA |
Secondary structure | LLLLEEEEEELLLLLLHHHHLLLLHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |