Difference between revisions of "Lnc-IGFL1-1:5"

Revision as of 05:58, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-IGFL1-1:5
Source	LNCipedia2.1
Same with	NONHSAT066867
Classification	intergenic
Length	2368 nt
Genomic location	chr19+:46712196..46718714
Exon number	5
Exons	46712196..46712426,46713419..46713526,46716047..46716267,46716594..46716740,46717054..46718714
Genome context
Sequence	000001 GGGAACTGTG GGCAAGAAGA GAGGCGGGAA AGCCAGAGCC ATCCAATGCT TGTCTTCTGG TGCCCTCCTC CAGGAAGCCA 000080 000081 TTCCTGGTGC CCTGGGCGCT GCTCCCAGCC TTGCTCACCC TGGGTCATCA CCGTTTTTGG AGGGGTCTGT GTCCTCCCCA 000160 000161 GACTATAAGA CCCAGAAAAG CAGGGCCTGG AGCTAAGTCA CAGTCGTGTC CCCAGCATCC ACTGACACAG AAAAAGCCAC 000240 000241 AAAGAAACAT GGTAAGAGCG TGGCAGATAA CATCCACGGT GCTATCGGGA GGTGACAGGT GACTGACCTC AGCCTTGGTG 000320 000321 TTCAAGAAGA TTCCAGAAGC ACTGCATCAC CAGTGTCTGA CACAAAGCCT GGGACATGTG GGCTTCCAAG TGGACCTCTC 000400 000401 CTGGATAAAT GACCATTAAT GAAACAGAGA AGGAGTTGAA GAGCCCCCAG AGGAGTGTGA GTCCCAGGGG TCCCGCCAGC 000480 000481 TCCACTCCCA CCTTCCAAAC CTGTGAAAGT CAGGTGCCTG AGTCGCACAG TCTCTCCCAC CCGAATGCCA TGAGCTGCAG 000560 000561 CCTGTCTCTG CAGGAGGGCC AGACATGCCG TGACATCACC AGCTCCTCTA GGAATATGGG ATACAAGGAG TGGCTGAGAT 000640 000641 CGGCTGATCA CCAGCTCACT CCGCTGCAGC CGCCCCAGAG CAATGGCTCC CCGAAGCCGT GTTCTGGCTG TCTTGGCCGC 000720 000721 TTTCTGTTTG TGACTCTCCC TGCCTCCACT CCCCCCACCA CCCCATGAAA TGATCTCATT TGGTCATTTA AACGGAAAAC 000800 000801 TAAAAAGTTT TAAGTGACTC TAGGAGAGCA GGAGAGAGGC AGGTCTCCCA GCTCAGACCC CGCCCCGGGA CGGCCCCACG 000880 000881 GAAGATGCAC ATCTGGATGT AGGCGCTCAA GGCACCGCGC GTGCGCCGAG TGGCCTTGCT CAGCTCCGTC CTTCTGAAAC 000960 000961 CCGGAATCCT CATGTGTCTG GGTCCCGCCC CATCCTGGCC TCCTACACCA CTGGTCCAGA TCCTCCACCT TCCCCCAACG 001040 001041 CGAGGTATTG ACATCAAAGC ATCACCTCAT CTGGCACAAG AATCTGAAAC ACAGACCGCA CCTTACACCA ACGTAGTGAA 001120 001121 TCCCTCCTTG GACCTGAGTT CAACAAGCCC AGAGTCGGGG CTCTGGGTTC CCGCCCAAAT GCCACGCATG CACACAGATG 001200 001201 GCACCTGGCG TCTCCTCAAA GGGACAGGAA TCCCGGGCTT CCCAGAATCA CCAGGTCGAT TTAAATGGCA TCAGATGAAC 001280 001281 TGGAAAAGAA TGAAAGTGCT ATTGCCTAAA GTGATGAAAT TTTCAGAGGA TGTATCGGTC CTGTCTGGTG GACAGACGGC 001360 001361 CACCAGAGGG AATGAACCAG TCTTCTCTGA ACATCCATGA GGATGAAGAA CAGTCACTGA GGTGACGGTA CCAAGTCACC 001440 001441 GGCCACCTCC CAGGGATCCT CTCATCCGGT CCTCACAGCA GCGCTGCATG GTCGGACCTC ATCACCCACA TTCCACCAAG 001520 001521 AGGAAGCTGA AGCCCAGGGC CTTCATCCAC TCATGTCCTC CAGACCCCTG GCACCCATCC TGGGCCCCAC CCCATCATCC 001600 001601 AGGCCTTGGG CCTTCGACCT GGGGAGAGTC CCTGTCTCCT CCATGAGCCG TCCAGGGCCT GAAGAGGTAT CCAATAAACA 001680 001681 AGAAAGCAGA ACACAAAGAG CTGTGATGGA GTGGATCTTA TGTAGTAAGA ATAAAATTAT TTTGAGAAAT TACTGGGTCA 001760 001761 TGTATTTACC CACAGAAAAA CAGAAGCAAA CACACGCGTG CGCGCACACA CACACACACA CACCACACAG GCTGTCACGT 001840 001841 GTCCTCAGCA CAAAGTGCCT TGAGAAAGGC CATTGCTGGC CCCACACTTA TCCTGACTGT GATCTTGCTG TGATCAGCAC 001920 001921 ATCCCATCAG TGTGGCAACA GGTGTGGCCA GAGTGGGAAC CAGGCCTTTT CTTCAGATTT GCTCTTTGTT <

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GGGAACTGTGGGCAAGAAGAGAGGCGGGAAAGCCAGAGCCATCCAATGCTTGTCTTCTGGTGCCCTCCTCCAGGAAGCCATTCCTGGTGCCCTGGGCGCTGCTCCCAGCCTTGCTCACCCTGGGTCATCACCGTTTTTGGAGGGGTCTGTGTCCTCCCCAGACTATAAGACCCAGAAAAGCAGGGCCTGGAGCTAAGTCACAGTCGTGTCCCCAGCATCCACTGACACAGAAAAAGCCACAAAGAAACATGGTAAGAGCGTGGCAGATAACATCCACGGTGCTATCGGGAGGTGACAGGTGACTGACCTCAGCCTTGGTGTTCAAGAAGATTCCAGAAGCACTGCATCACCAGTGTCTGACACAAAGCCTGGGACATGTGGGCTTCCAAGTGGACCTCTCCTGGATAAATGACCATTAATGAAACAGAGAAGGAGTTGAAGAGCCCCCAGAGGAGTGTGAGTCCCAGGGGTCCCGCCAGCTCCACTCCCACCTTCCAAACCTGTGAAAGTCAGGTGCCTGAGTCGCACAGTCTCTCCCACCCGAATGCCATGAGCTGCAGCCTGTCTCTGCAGGAGGGCCAGACATGCCGTGACATCACCAGCTCCTCTAGGAATATGGGATACAAGGAGTGGCTGAGATCGGCTGATCACCAGCTCACTCCGCTGCAGCCGCCCCAGAGCAATGGCTCCCCGAAGCCGTGTTCTGGCTGTCTTGGCCGCTTTCTGTTTGTGACTCTCCCTGCCTCCACTCCCCCCACCACCCCATGAAATGATCTCATTTGGTCATTTAAACGGAAAACTAAAAAGTTTTAAGTGACTCTAGGAGAGCAGGAGAGAGGCAGGTCTCCCAGCTCAGACCCCGCCCCGGGACGGCCCCACGGAAGATGCACATCTGGATGTAGGCGCTCAAGGCACCGCGCGTGCGCCGAGTGGCCTTGCTCAGCTCCGTCCTTCTGAAACCCGGAATCCTCATGTGTCTGGGTCCCGCCCCATCCTGGCCTCCTACACCACTGGTCCAGATCCTCCACCTTCCCCCAACGCGAGGTATTGACATCAAAGCATCACCTCATCTGGCACAAGAATCTGAAACACAGACCGCACCTTACACCAACGTAGTGAATCCCTCCTTGGACCTGAGTTCAACAAGCCCAGAGTCGGGGCTCTGGGTTCCCGCCCAAATGCCACGCATGCACACAGATGGCACCTGGCGTCTCCTCAAAGGGACAGGAATCCCGGGCTTCCCAGAATCACCAGGTCGATTTAAATGGCATCAGATGAACTGGAAAAGAATGAAAGTGCTATTGCCTAAAGTGATGAAATTTTCAGAGGATGTATCGGTCCTGTCTGGTGGACAGACGGCCACCAGAGGGAATGAACCAGTCTTCTCTGAACATCCATGAGGATGAAGAACAGTCACTGAGGTGACGGTACCAAGTCACCGGCCACCTCCCAGGGATCCTCTCATCCGGTCCTCACAGCAGCGCTGCATGGTCGGACCTCATCACCCACATTCCACCAAGAGGAAGCTGAAGCCCAGGGCCTTCATCCACTCATGTCCTCCAGACCCCTGGCACCCATCCTGGGCCCCACCCCATCATCCAGGCCTTGGGCCTTCGACCTGGGGAGAGTCCCTGTCTCCTCCATGAGCCGTCCAGGGCCTGAAGAGGTATCCAATAAACAAGAAAGCAGAACACAAAGAGCTGTGATGGAGTGGATCTTATGTAGTAAGAATAAAATTATTTTGAGAAATTACTGGGTCATGTATTTACCCACAGAAAAACAGAAGCAAACACACGCGTGCGCGCACACACACACACACACACCACACAGGCTGTCACGTGTCCTCAGCACAAAGTGCCTTGAGAAAGGCCATTGCTGGCCCCACACTTATCCTGACTGTGATCTTGCTGTGATCAGCACATCCCATCAGTGTGGCAACAGGTGTGGCCAGAGTGGGAACCAGGCCTTTTCTTCAGATTTGCTCTTTGTTCCTGAATAGCCACCGTCAGAACAGACACCCTCCTAGGAGTCACTTGATTAAAAATTTCCTTTTGGATATTTAGGTTGATGTTTTATCCATCGGTTAAAGTATAAATGTATATTTATTATAAAAGTGTAATTATGGCTCTAATTAATGATTATGGTGAATTTTACTAACTATAGCTATGAAAATATTCCAATAGATAAAAACAGTGCTAAAAATGTACAGTTAATCCAAGAGTGGTAACTTTAAGTCTTGTAATTTTTGATCTAATAAATCTTCATAAAATATACATGATCATGAAGTACATCAGTAGAATTAATCCTAATATTTACAGCAATACTTGGCGTGCTGTCTCTCATAAAAAATAACATTAATAGTAAAAAA</dnaseq>|
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-[[Category:Intergenic]][[Category:lnc-IGFL1-1]]
+[[Category:Intergenic]][[Category:lnc-IGFL1-1]][[Category:NONHSAG026073]]