Difference between revisions of "ENST00000557355.1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>AGGACTTCCCAAGAGTGTCCCATGGAACCTGAGTTCTAAGGACGGTACATGAAAAAAATCAACATGGGTTCCATGATCAAAGAAGTTTGGGAAATGGGCTAAATGAAAGGACTTCCAAGGCCTTTTATCTGCTAATGAGAAAGAACAAGCCCTGTGAAAAACAAGCTGCTGTCCCTGCTAGAGGCATCCTGCAATCCATGGATGTTTATCACCAAGCCATTGTTAACATGAGGTGGTTTCCAAAAGGAAAAGCTTTGGGAGATAGAAGTCCTCGTTTTGACCTCTGCCCTCCTTGTACACCAGGAGCCAGAAAAACTTCATCTCTTTTACAAGAAACATTGAGATTCCTGTAAAATTAAGAAATCACACAATTTGATGGTCTACATTATCTAAAGCAAATGAGACTTCTATTTGGAACAAAGACTACCTTGTTGGGAAATGAGTCTGCAAGTTAAAGTGTTTTCTGGCACCTGTGCAATTGTTTCCTACTACCCTGCGTGCTGCTTAAGTCTGATGAAGACATTCTTCTTTGGAGTCTGACATTAGGT</dnaseq>| | sequence = <dnaseq>AGGACTTCCCAAGAGTGTCCCATGGAACCTGAGTTCTAAGGACGGTACATGAAAAAAATCAACATGGGTTCCATGATCAAAGAAGTTTGGGAAATGGGCTAAATGAAAGGACTTCCAAGGCCTTTTATCTGCTAATGAGAAAGAACAAGCCCTGTGAAAAACAAGCTGCTGTCCCTGCTAGAGGCATCCTGCAATCCATGGATGTTTATCACCAAGCCATTGTTAACATGAGGTGGTTTCCAAAAGGAAAAGCTTTGGGAGATAGAAGTCCTCGTTTTGACCTCTGCCCTCCTTGTACACCAGGAGCCAGAAAAACTTCATCTCTTTTACAAGAAACATTGAGATTCCTGTAAAATTAAGAAATCACACAATTTGATGGTCTACATTATCTAAAGCAAATGAGACTTCTATTTGGAACAAAGACTACCTTGTTGGGAAATGAGTCTGCAAGTTAAAGTGTTTTCTGGCACCTGTGCAATTGTTTCCTACTACCCTGCGTGCTGCTTAAGTCTGATGAAGACATTCTTCTTTGGAGTCTGACATTAGGT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-GPR65-1]] | + | [[Category:Intergenic]][[Category:lnc-GPR65-1]][[Category:NONHSAG015652]] |
Revision as of 06:15, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
ENST00000557355.1 |
| Source |
Gencode19 |
| Same with |
lnc-GPR65-1:10,NONHSAT038183 |
| Classification |
intergenic |
| Length |
548 nt |
| Genomic location |
chr14+:88503281..88514483 |
| Exon number |
4 |
| Exons |
88503281..88503423,88503695..88503783,88510959..88511192,88514402..88514483 |
| Genome context |
|
| Sequence |
000001 AGGACTTCCC AAGAGTGTCC CATGGAACCT GAGTTCTAAG GACGGTACAT GAAAAAAATC AACATGGGTT CCATGATCAA 000080
000081 AGAAGTTTGG GAAATGGGCT AAATGAAAGG ACTTCCAAGG CCTTTTATCT GCTAATGAGA AAGAACAAGC CCTGTGAAAA 000160 000161 ACAAGCTGCT GTCCCTGCTA GAGGCATCCT GCAATCCATG GATGTTTATC ACCAAGCCAT TGTTAACATG AGGTGGTTTC 000240 000241 CAAAAGGAAA AGCTTTGGGA GATAGAAGTC CTCGTTTTGA CCTCTGCCCT CCTTGTACAC CAGGAGCCAG AAAAACTTCA 000320 000321 TCTCTTTTAC AAGAAACATT GAGATTCCTG TAAAATTAAG AAATCACACA ATTTGATGGT CTACATTATC TAAAGCAAAT 000400 000401 GAGACTTCTA TTTGGAACAA AGACTACCTT GTTGGGAAAT GAGTCTGCAA GTTAAAGTGT TTTCTGGCAC CTGTGCAATT 000480 000481 GTTTCCTACT ACCCTGCGTG CTGCTTAAGT CTGATGAAGA CATTCTTCTT TGGAGTCTGA CATTAGGT |
Predicted Small Protein
| Name | ENST00000557355.1_smProtein_134:352 |
| Length | 73 |
| Molecular weight | 8157.533 |
| Aromaticity | 0.0694444444444 |
| Instability index | 68.3305555556 |
| Isoelectric point | 10.1506958008 |
| Runs | 9 |
| Runs residual | 0.0159164639092 |
| Runs probability | 0.0477241947831 |
| Amino acid sequence | MRKNKPCEKQAAVPARGILQSMDVYHQAIVNMRWFPKGKALGDRSPRFDLCPPCTPGARK TSSLLQETLRFL |
| Secondary structure | LLLLLHHHHLLLLLHHHHHHHHHHHHHHHHHLEELLLLLLLLLLLLLLLLLLLLLLLLLL LLHHHHHHHHHL |
| PRMN | - |
| PiMo | - |
