Difference between revisions of "NONHSAT076340"

From LncRNAWiki
Jump to: navigation, search
Line 42: Line 42:
 
sequence = <dnaseq>ATTTTGTTGTTGGTGCGCGACGCAGTCAGCTGCGTGATTCCCGTGATTGCGTTACAAGCTTTGTCTCCTTCGACTTGGAGTCTTTGTCCAGGACGATGAGACACTCAAAGAGAACTTACTGTCCTGATTGGGATGACAAGGATTGGGATTATGGAAAATGGAGGAGCAGCAGCAGTCATAAAAGAAGGAAGAGATCACATAGCAGTGCCCAGGAGAACAAGCGCTGCAAATACAATCACTCTAAAATGTGTGATAGGTAAGGAGGATACTTAAAATGTCTGAATATAACAATACATTACTAGACAAAACTAGTATCACTTAAAATAAGTACCTGATTACTACCATTCGTTTGTTTCCAATGAGAGATTTTGATGGTTTGTAATGTTTGTAAAATTAAGCTGCTTGTGGGGGAGTCTAGGTGCTGTCTTGAAGAGAATGTGAGGATATTTGGTCTTAGCATAAAACATTGAAAATAATTTTTATTTCTCTAGCCATTATTTGGAAAGCAGGTCTATAAATGAGAAAGATTATCATAGTCGACGCTACATTGATGAGTACAGAAATGACTACACTCAAGGATGTGAACCTGGACATCGCCAAAGAGACCATGAAAGCCGGTATCAGAA</dnaseq>|
 
sequence = <dnaseq>ATTTTGTTGTTGGTGCGCGACGCAGTCAGCTGCGTGATTCCCGTGATTGCGTTACAAGCTTTGTCTCCTTCGACTTGGAGTCTTTGTCCAGGACGATGAGACACTCAAAGAGAACTTACTGTCCTGATTGGGATGACAAGGATTGGGATTATGGAAAATGGAGGAGCAGCAGCAGTCATAAAAGAAGGAAGAGATCACATAGCAGTGCCCAGGAGAACAAGCGCTGCAAATACAATCACTCTAAAATGTGTGATAGGTAAGGAGGATACTTAAAATGTCTGAATATAACAATACATTACTAGACAAAACTAGTATCACTTAAAATAAGTACCTGATTACTACCATTCGTTTGTTTCCAATGAGAGATTTTGATGGTTTGTAATGTTTGTAAAATTAAGCTGCTTGTGGGGGAGTCTAGGTGCTGTCTTGAAGAGAATGTGAGGATATTTGGTCTTAGCATAAAACATTGAAAATAATTTTTATTTCTCTAGCCATTATTTGGAAAGCAGGTCTATAAATGAGAAAGATTATCATAGTCGACGCTACATTGATGAGTACAGAAATGACTACACTCAAGGATGTGAACCTGGACATCGCCAAAGAGACCATGAAAGCCGGTATCAGAA</dnaseq>|
 
}}
 
}}
[[Category:Sense]][[Category:NONHSAG030224]]
+
[[Category:Sense]][[Category:NONHSAG030224]][[Category:Transcripts]]

Revision as of 11:31, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT076340

Source

NONCODE4.0

Same with

,

Classification

sense

Length

626 nt

Genomic location

chr2-:201726055..201729381

Exon number

2

Exons

201726055..201726585,201729287..201729381

Genome context

Sequence
000001 ATTTTGTTGT TGGTGCGCGA CGCAGTCAGC TGCGTGATTC CCGTGATTGC GTTACAAGCT TTGTCTCCTT CGACTTGGAG 000080
000081 TCTTTGTCCA GGACGATGAG ACACTCAAAG AGAACTTACT GTCCTGATTG GGATGACAAG GATTGGGATT ATGGAAAATG 000160
000161 GAGGAGCAGC AGCAGTCATA AAAGAAGGAA GAGATCACAT AGCAGTGCCC AGGAGAACAA GCGCTGCAAA TACAATCACT 000240
000241 CTAAAATGTG TGATAGGTAA GGAGGATACT TAAAATGTCT GAATATAACA ATACATTACT AGACAAAACT AGTATCACTT 000320
000321 AAAATAAGTA CCTGATTACT ACCATTCGTT TGTTTCCAAT GAGAGATTTT GATGGTTTGT AATGTTTGTA AAATTAAGCT 000400
000401 GCTTGTGGGG GAGTCTAGGT GCTGTCTTGA AGAGAATGTG AGGATATTTG GTCTTAGCAT AAAACATTGA AAATAATTTT 000480
000481 TATTTCTCTA GCCATTATTT GGAAAGCAGG TCTATAAATG AGAAAGATTA TCATAGTCGA CGCTACATTG ATGAGTACAG 000560
000561 AAATGACTAC ACTCAAGGAT GTGAACCTGG ACATCGCCAA AGAGACCATG AAAGCCGGTA TCAGAA
[back to top]

Predicted Small Protein

Name NONHSAT076340_smProtein_95:259
Length 55
Molecular weight 6747.4233
Aromaticity 0.111111111111
Instability index 95.2796296296
Isoelectric point 9.95697021484
Runs 7
Runs residual 0.0330623306233
Runs probability 0.0372094783859
Amino acid sequence MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDR
Secondary structure LLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLHHHHLLLEELLLLLLLLL
PRMN -
PiMo -