Difference between revisions of "NONHSAT076340"
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sequence = <dnaseq>ATTTTGTTGTTGGTGCGCGACGCAGTCAGCTGCGTGATTCCCGTGATTGCGTTACAAGCTTTGTCTCCTTCGACTTGGAGTCTTTGTCCAGGACGATGAGACACTCAAAGAGAACTTACTGTCCTGATTGGGATGACAAGGATTGGGATTATGGAAAATGGAGGAGCAGCAGCAGTCATAAAAGAAGGAAGAGATCACATAGCAGTGCCCAGGAGAACAAGCGCTGCAAATACAATCACTCTAAAATGTGTGATAGGTAAGGAGGATACTTAAAATGTCTGAATATAACAATACATTACTAGACAAAACTAGTATCACTTAAAATAAGTACCTGATTACTACCATTCGTTTGTTTCCAATGAGAGATTTTGATGGTTTGTAATGTTTGTAAAATTAAGCTGCTTGTGGGGGAGTCTAGGTGCTGTCTTGAAGAGAATGTGAGGATATTTGGTCTTAGCATAAAACATTGAAAATAATTTTTATTTCTCTAGCCATTATTTGGAAAGCAGGTCTATAAATGAGAAAGATTATCATAGTCGACGCTACATTGATGAGTACAGAAATGACTACACTCAAGGATGTGAACCTGGACATCGCCAAAGAGACCATGAAAGCCGGTATCAGAA</dnaseq>| | sequence = <dnaseq>ATTTTGTTGTTGGTGCGCGACGCAGTCAGCTGCGTGATTCCCGTGATTGCGTTACAAGCTTTGTCTCCTTCGACTTGGAGTCTTTGTCCAGGACGATGAGACACTCAAAGAGAACTTACTGTCCTGATTGGGATGACAAGGATTGGGATTATGGAAAATGGAGGAGCAGCAGCAGTCATAAAAGAAGGAAGAGATCACATAGCAGTGCCCAGGAGAACAAGCGCTGCAAATACAATCACTCTAAAATGTGTGATAGGTAAGGAGGATACTTAAAATGTCTGAATATAACAATACATTACTAGACAAAACTAGTATCACTTAAAATAAGTACCTGATTACTACCATTCGTTTGTTTCCAATGAGAGATTTTGATGGTTTGTAATGTTTGTAAAATTAAGCTGCTTGTGGGGGAGTCTAGGTGCTGTCTTGAAGAGAATGTGAGGATATTTGGTCTTAGCATAAAACATTGAAAATAATTTTTATTTCTCTAGCCATTATTTGGAAAGCAGGTCTATAAATGAGAAAGATTATCATAGTCGACGCTACATTGATGAGTACAGAAATGACTACACTCAAGGATGTGAACCTGGACATCGCCAAAGAGACCATGAAAGCCGGTATCAGAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG030224]] | + | [[Category:Sense]][[Category:NONHSAG030224]][[Category:Transcripts]] |
Revision as of 11:31, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076340 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
626 nt |
Genomic location |
chr2-:201726055..201729381 |
Exon number |
2 |
Exons |
201726055..201726585,201729287..201729381 |
Genome context |
|
Sequence |
000001 ATTTTGTTGT TGGTGCGCGA CGCAGTCAGC TGCGTGATTC CCGTGATTGC GTTACAAGCT TTGTCTCCTT CGACTTGGAG 000080
000081 TCTTTGTCCA GGACGATGAG ACACTCAAAG AGAACTTACT GTCCTGATTG GGATGACAAG GATTGGGATT ATGGAAAATG 000160 000161 GAGGAGCAGC AGCAGTCATA AAAGAAGGAA GAGATCACAT AGCAGTGCCC AGGAGAACAA GCGCTGCAAA TACAATCACT 000240 000241 CTAAAATGTG TGATAGGTAA GGAGGATACT TAAAATGTCT GAATATAACA ATACATTACT AGACAAAACT AGTATCACTT 000320 000321 AAAATAAGTA CCTGATTACT ACCATTCGTT TGTTTCCAAT GAGAGATTTT GATGGTTTGT AATGTTTGTA AAATTAAGCT 000400 000401 GCTTGTGGGG GAGTCTAGGT GCTGTCTTGA AGAGAATGTG AGGATATTTG GTCTTAGCAT AAAACATTGA AAATAATTTT 000480 000481 TATTTCTCTA GCCATTATTT GGAAAGCAGG TCTATAAATG AGAAAGATTA TCATAGTCGA CGCTACATTG ATGAGTACAG 000560 000561 AAATGACTAC ACTCAAGGAT GTGAACCTGG ACATCGCCAA AGAGACCATG AAAGCCGGTA TCAGAA |
Predicted Small Protein
Name | NONHSAT076340_smProtein_95:259 |
Length | 55 |
Molecular weight | 6747.4233 |
Aromaticity | 0.111111111111 |
Instability index | 95.2796296296 |
Isoelectric point | 9.95697021484 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0372094783859 |
Amino acid sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLHHHHLLLEELLLLLLLLL |
PRMN | - |
PiMo | - |