Difference between revisions of "ENST00000452322.1"
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sequence = <dnaseq>GATCCTTGAAAAGTGACTGCATCATGGGGCTGTATCCTAATAAGTCTGGAACGTTTTTTCTTAGAGTTCCAGAATTGAGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTCCAGAATGATCAAATGAGATCACTACCCAATGAAATGATGGGCCGAGGAGCCAGAAGTTGTCCTACTACCTGCTTTCCAGGTCCAGATTCCACGAGAGCCTTCTGGGCTCCCACCAGAGACCCTCAGTGAAGACTCTGTTGAAGACTTTAAGACCATGCTAGAAAGCCTCCCGGCAGAGGTTCAGGAAGTTCTGCTATGAGGATGCAGCTGGCCCCAGGGATGTCCTCAGGCATCTCTAGGACCTTGCTGGACGGTG</dnaseq>| | sequence = <dnaseq>GATCCTTGAAAAGTGACTGCATCATGGGGCTGTATCCTAATAAGTCTGGAACGTTTTTTCTTAGAGTTCCAGAATTGAGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTCCAGAATGATCAAATGAGATCACTACCCAATGAAATGATGGGCCGAGGAGCCAGAAGTTGTCCTACTACCTGCTTTCCAGGTCCAGATTCCACGAGAGCCTTCTGGGCTCCCACCAGAGACCCTCAGTGAAGACTCTGTTGAAGACTTTAAGACCATGCTAGAAAGCCTCCCGGCAGAGGTTCAGGAAGTTCTGCTATGAGGATGCAGCTGGCCCCAGGGATGTCCTCAGGCATCTCTAGGACCTTGCTGGACGGTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-CELA3A-1]][[Category:NONHSAG000626]] | + | [[Category:Intergenic]][[Category:lnc-CELA3A-1]][[Category:NONHSAG000626]][[Category:ENSG00000218510.3]] |
Revision as of 18:18, 15 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000452322.1 |
| Source |
Gencode19 |
| Same with |
lnc-CELA3A-1:5,NONHSAT001468 |
| Classification |
intergenic |
| Length |
374 nt |
| Genomic location |
chr1+:22354832..22357105 |
| Exon number |
2 |
| Exons |
22354832..22354872,22356773..22357105 |
| Genome context |
|
| Sequence |
000001 GATCCTTGAA AAGTGACTGC ATCATGGGGC TGTATCCTAA TAAGTCTGGA ACGTTTTTTC TTAGAGTTCC AGAATTGAGA 000080
000081 CTGAAGTGTA CCCAGAGACA CAAAGAAATA CAGAAGTCCA GAATGATCAA ATGAGATCAC TACCCAATGA AATGATGGGC 000160 000161 CGAGGAGCCA GAAGTTGTCC TACTACCTGC TTTCCAGGTC CAGATTCCAC GAGAGCCTTC TGGGCTCCCA CCAGAGACCC 000240 000241 TCAGTGAAGA CTCTGTTGAA GACTTTAAGA CCATGCTAGA AAGCCTCCCG GCAGAGGTTC AGGAAGTTCT GCTATGAGGA 000320 000321 TGCAGCTGGC CCCAGGGATG TCCTCAGGCA TCTCTAGGAC CTTGCTGGAC GGTG |
Predicted Small Protein
| Name | ENST00000452322.1_smProtein_23:133 |
| Length | 37 |
| Molecular weight | 4335.1756 |
| Aromaticity | 0.0833333333333 |
| Instability index | 66.5472222222 |
| Isoelectric point | 10.6295776367 |
| Runs | 5 |
| Runs residual | 0.0415695415695 |
| Runs probability | 0.0381734675852 |
| Amino acid sequence | MGLYPNKSGTFFLRVPELRLKCTQRHKEIQKSRMIK |
| Secondary structure | LLLLLLLLLEEEELLHHHHHHHHHHHHHHHHHHLLL |
| PRMN | - |
| PiMo | - |
