Difference between revisions of "NONHSAT076703"
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sequence = <dnaseq>tgaagtgctgggattacaggcatgagccaccacagccagcTGGATTATGAGTTTTTTTTAAATTTTACTTTAAAACTTTCACACatttaaaaaatatatatatatacacatacacacacacacacacacacacacacacacacacacacatatatatagaaaagattgtttttatgataattttttttaaCATCCTAAAGGTGAGGATATAGAAATAGCAAGTGATAATTATTCTTTGGTAAAACTTGTCTGTGAAAGGAAATGGACTGAAAGCATAGAAGCTACAGCTCATTTATAACCAATCGAGAAGCAGGACATGTCAAATGCTGTACAGAGTCCTGCTACCTGGGAAGCTTCTGATAAACGAGGGTTGCTATTATTATTATTGTCATTAAAATGTCTTCAGTTCTCATAGACTTTCAGCACCAGCACACTGTCCAGGAGCACTGTCCAGAATGTTCTCAAGAAGAATTCTCTTTCTAGAACGCTCTCCTTTTTTAAAGTTTCTTCTCTTATTTCCCGCTCCTTGGCTACTCAGTAGAGTTGTGCTGGTGCTGAAAGTCTACGAGACCTGAAGGCATTTTAGTGGTAATAATAATAATAATAGCAACCCCCGTTTATTAGAAGCCTCCCAGGTAGCAGGACTCTGCACAGCATTTTACACAGTGTGCTACTCCATTGGTTATAAATATGCTGTAGCTCCTATGCTTTCAGTCCACTTTCTTCCACAGAAAAGTTTTGCCAAAGAATAATTATCACTTGCTATTCAATATCCTGACCTCCAGGATGttaaaaaatgtttatcataaaaataatcttttctatgtaatttttaaatgtgtaaaaatttaaaattaaaaaaCTCATAATCCAACCGTCTATACATATAAGCATCTTGGTACAACTCTTTCTAAAAATCATCATACATATCTAACACATAGGTACATATTGT</dnaseq>| | sequence = <dnaseq>tgaagtgctgggattacaggcatgagccaccacagccagcTGGATTATGAGTTTTTTTTAAATTTTACTTTAAAACTTTCACACatttaaaaaatatatatatatacacatacacacacacacacacacacacacacacacacacacacatatatatagaaaagattgtttttatgataattttttttaaCATCCTAAAGGTGAGGATATAGAAATAGCAAGTGATAATTATTCTTTGGTAAAACTTGTCTGTGAAAGGAAATGGACTGAAAGCATAGAAGCTACAGCTCATTTATAACCAATCGAGAAGCAGGACATGTCAAATGCTGTACAGAGTCCTGCTACCTGGGAAGCTTCTGATAAACGAGGGTTGCTATTATTATTATTGTCATTAAAATGTCTTCAGTTCTCATAGACTTTCAGCACCAGCACACTGTCCAGGAGCACTGTCCAGAATGTTCTCAAGAAGAATTCTCTTTCTAGAACGCTCTCCTTTTTTAAAGTTTCTTCTCTTATTTCCCGCTCCTTGGCTACTCAGTAGAGTTGTGCTGGTGCTGAAAGTCTACGAGACCTGAAGGCATTTTAGTGGTAATAATAATAATAATAGCAACCCCCGTTTATTAGAAGCCTCCCAGGTAGCAGGACTCTGCACAGCATTTTACACAGTGTGCTACTCCATTGGTTATAAATATGCTGTAGCTCCTATGCTTTCAGTCCACTTTCTTCCACAGAAAAGTTTTGCCAAAGAATAATTATCACTTGCTATTCAATATCCTGACCTCCAGGATGttaaaaaatgtttatcataaaaataatcttttctatgtaatttttaaatgtgtaaaaatttaaaattaaaaaaCTCATAATCCAACCGTCTATACATATAAGCATCTTGGTACAACTCTTTCTAAAAATCATCATACATATCTAACACATAGGTACATATTGT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG030422]] | + | [[Category:Intergenic]][[Category:NONHSAG030422]][[Category:Transcripts]] |
Revision as of 10:37, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT076703 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
952 nt |
| Genomic location |
chr2+:213846495..213847446 |
| Exon number |
1 |
| Exons |
213846495..213847446 |
| Genome context |
|
| Sequence |
000001 tgaagtgctg ggattacagg catgagccac cacagccagc TGGATTATGA GTTTTTTTTA AATTTTACTT TAAAACTTTC 000080
000081 ACACatttaa aaaatatata tatatacaca tacacacaca cacacacaca cacacacaca cacacacaca tatatataga 000160 000161 aaagattgtt tttatgataa ttttttttaa CATCCTAAAG GTGAGGATAT AGAAATAGCA AGTGATAATT ATTCTTTGGT 000240 000241 AAAACTTGTC TGTGAAAGGA AATGGACTGA AAGCATAGAA GCTACAGCTC ATTTATAACC AATCGAGAAG CAGGACATGT 000320 000321 CAAATGCTGT ACAGAGTCCT GCTACCTGGG AAGCTTCTGA TAAACGAGGG TTGCTATTAT TATTATTGTC ATTAAAATGT 000400 000401 CTTCAGTTCT CATAGACTTT CAGCACCAGC ACACTGTCCA GGAGCACTGT CCAGAATGTT CTCAAGAAGA ATTCTCTTTC 000480 000481 TAGAACGCTC TCCTTTTTTA AAGTTTCTTC TCTTATTTCC CGCTCCTTGG CTACTCAGTA GAGTTGTGCT GGTGCTGAAA 000560 000561 GTCTACGAGA CCTGAAGGCA TTTTAGTGGT AATAATAATA ATAATAGCAA CCCCCGTTTA TTAGAAGCCT CCCAGGTAGC 000640 000641 AGGACTCTGC ACAGCATTTT ACACAGTGTG CTACTCCATT GGTTATAAAT ATGCTGTAGC TCCTATGCTT TCAGTCCACT 000720 000721 TTCTTCCACA GAAAAGTTTT GCCAAAGAAT AATTATCACT TGCTATTCAA TATCCTGACC TCCAGGATGt taaaaaatgt 000800 000801 ttatcataaa aataatcttt tctatgtaat ttttaaatgt gtaaaaattt aaaattaaaa aaCTCATAAT CCAACCGTCT 000880 000881 ATACATATAA GCATCTTGGT ACAACTCTTT CTAAAAATCA TCATACATAT CTAACACATA GGTACATATT GT |
Predicted Small Protein
| Name | NONHSAT076703_smProtein_455:574 |
| Length | 40 |
| Molecular weight | 4739.7957 |
| Aromaticity | 0.179487179487 |
| Instability index | 73.5615384615 |
| Isoelectric point | 10.9313354492 |
| Runs | 9 |
| Runs residual | 0.0620286576169 |
| Runs probability | 0.0645645645647 |
| Amino acid sequence | MFSRRILFLERSPFLKFLLLFPAPWLLSRVVLVLKVYET |
| Secondary structure | LLEEEEELLLLLHHHHHHHHLLLHHHHHLEEEEEEEEEL |
| PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
| PiMo | iiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooo |
