Difference between revisions of "Lnc-MTHFSD-2:6"
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sequence = <dnaseq>CGGGTATCAGGATCATACTCAAACCCCAACCCCTGCCCGCCCCAGCCAGGAGGGGAGACGGTTGGGAGTGGGAGGCCTCGGCGCTGTTCTCTGGATGCAACTGAGATTGCCGCTAGAGGGTGACGCCTGGGTCGGAATCCAAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTTCCGAAGATACCAAGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTTGGCACAACTGACCCCAACCTAGCCCTCCATGAGGACTGAGCGCATGAGAGATCCTGAGCCACAGCCGCCCAGCCCTGCTCCTCTCGAATTTCTGACCTACAGGAACTGCAAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCATTTTGGCATGATTTGTTATGCAGTCGTAGATAACCAGAAAACATCGGATTTACATTTTAAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGCTGCTGTTGGGAGCTCCACTGGACTTCTGTCCAGAGCTCCTCAGCTCACCTCTCTGTATCCTTGCCCTGTGGCTCAGGCTTCTAACAATACAGAGGCTGGATTCCAAGAGGAGGGAATTAGAAGCGTTCAGCCTTCTTAAGACCAGGATTCAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGCAGGAATGGGTGGCATATGCTGGGGGTAGGGGTAGCATTGTTGGGGATCATCTTTGGAGCTGTGTGCCAAGGAGTAAATTGCTGGGCTGCTTTCTACCTGAGGAAGTCCACTATGCTTGCTTGTGGAGAGTGGATTGTGTGCTCAGAGTCCACAAGGATTTAAGAATCCGAGCCCTGCTGCCCTTGCCTCAGCCTGTGCATTAGGGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCTTGATTTTGGTCCTAGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACACTTCACCCTAAAGACAGATCCTGCTGTTCAGCAACAATGTGAGTGGCCCACACATTTGTCCAGCATGAAACCGTTTGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAGTTGTGTAGCTTAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTGCTTGGAGAAGTTAATTATAGGAATATCCTGCAACCTGCTGCTCTGAGCCTGTGCACCTGGGGTGTTTCCCTGGAGGTCCTGTGTATGAGGATACTCATCAGCATGGGGTTTGGGAAGCCTAGCAGTGGAGACAACCTAGGTGGTCCTCTCCAGGGGAGTAGGTAAGAGCCCTACAGCAGTGAAAAGCATTGAAGGAAAAGTGTGTTCAGCAGTGCTCTTAATCTGATCAGAGCAGCCTGAACACATTCTAAACACAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCCTCGCCAAGTGACCATGACTCCCCCGAGTCACCTGACCTCTGTGTTTACATCCTCAAAGTTAAGTAGTCAGGAAAGGGGGCTTGGGGCTTGCCACATGGATGGTTGCCACTCTCCTTTGCAAAGTGTAGTCCCCAAAAACAGGTGGAAGAGGGAAGGGTCCAATTAGAAGGCCGAGTACCAGCTGCCATGAATATGCCAGAGCTGCTGGCTAGTGATAAATAACTGAAACCCAGGGGGACAGCAGAGCTTGGGTGACCATACATTCTAGGAAAGAAAACATGCCTGTTGTCCTGGCTTTTTATCCAGCTTAGACAAAGATGGGCAAAGAAAATAATTTAGAAAATGGTAGAGATGGGCACAGAGAAAGGGCACGGAGGGAGGCACAAACAGAAGGCCAAGTGATGGTGGAGGCAGACATTGGAGAAATGCCTTTACAAGCCGGGGAATGCCAAGGATGCTGGCAACCCTGGGAGTGGGAAGAACCTGGAACACACCCTCCGTCAGAGTCTCCAGAAGGAACTGGCCCTTCATCACCTTTCGGACTTCTGGCCTCCAGAACTGGGCAAGAAAATGTTTCTGCTGTTGGAGGCCATCCAGCTGGTGGTCATTTGTTATGGTTGCCACAGAAAACGAATATAGATTTAGACATCTAATTTGCATATATAGATATGCATGTGTATTTGTTAAATAAAAGATAAAGCATGACAAC</dnaseq>| | sequence = <dnaseq>CGGGTATCAGGATCATACTCAAACCCCAACCCCTGCCCGCCCCAGCCAGGAGGGGAGACGGTTGGGAGTGGGAGGCCTCGGCGCTGTTCTCTGGATGCAACTGAGATTGCCGCTAGAGGGTGACGCCTGGGTCGGAATCCAAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTTCCGAAGATACCAAGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTTGGCACAACTGACCCCAACCTAGCCCTCCATGAGGACTGAGCGCATGAGAGATCCTGAGCCACAGCCGCCCAGCCCTGCTCCTCTCGAATTTCTGACCTACAGGAACTGCAAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCATTTTGGCATGATTTGTTATGCAGTCGTAGATAACCAGAAAACATCGGATTTACATTTTAAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGCTGCTGTTGGGAGCTCCACTGGACTTCTGTCCAGAGCTCCTCAGCTCACCTCTCTGTATCCTTGCCCTGTGGCTCAGGCTTCTAACAATACAGAGGCTGGATTCCAAGAGGAGGGAATTAGAAGCGTTCAGCCTTCTTAAGACCAGGATTCAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGCAGGAATGGGTGGCATATGCTGGGGGTAGGGGTAGCATTGTTGGGGATCATCTTTGGAGCTGTGTGCCAAGGAGTAAATTGCTGGGCTGCTTTCTACCTGAGGAAGTCCACTATGCTTGCTTGTGGAGAGTGGATTGTGTGCTCAGAGTCCACAAGGATTTAAGAATCCGAGCCCTGCTGCCCTTGCCTCAGCCTGTGCATTAGGGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCTTGATTTTGGTCCTAGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACACTTCACCCTAAAGACAGATCCTGCTGTTCAGCAACAATGTGAGTGGCCCACACATTTGTCCAGCATGAAACCGTTTGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAGTTGTGTAGCTTAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTGCTTGGAGAAGTTAATTATAGGAATATCCTGCAACCTGCTGCTCTGAGCCTGTGCACCTGGGGTGTTTCCCTGGAGGTCCTGTGTATGAGGATACTCATCAGCATGGGGTTTGGGAAGCCTAGCAGTGGAGACAACCTAGGTGGTCCTCTCCAGGGGAGTAGGTAAGAGCCCTACAGCAGTGAAAAGCATTGAAGGAAAAGTGTGTTCAGCAGTGCTCTTAATCTGATCAGAGCAGCCTGAACACATTCTAAACACAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCCTCGCCAAGTGACCATGACTCCCCCGAGTCACCTGACCTCTGTGTTTACATCCTCAAAGTTAAGTAGTCAGGAAAGGGGGCTTGGGGCTTGCCACATGGATGGTTGCCACTCTCCTTTGCAAAGTGTAGTCCCCAAAAACAGGTGGAAGAGGGAAGGGTCCAATTAGAAGGCCGAGTACCAGCTGCCATGAATATGCCAGAGCTGCTGGCTAGTGATAAATAACTGAAACCCAGGGGGACAGCAGAGCTTGGGTGACCATACATTCTAGGAAAGAAAACATGCCTGTTGTCCTGGCTTTTTATCCAGCTTAGACAAAGATGGGCAAAGAAAATAATTTAGAAAATGGTAGAGATGGGCACAGAGAAAGGGCACGGAGGGAGGCACAAACAGAAGGCCAAGTGATGGTGGAGGCAGACATTGGAGAAATGCCTTTACAAGCCGGGGAATGCCAAGGATGCTGGCAACCCTGGGAGTGGGAAGAACCTGGAACACACCCTCCGTCAGAGTCTCCAGAAGGAACTGGCCCTTCATCACCTTTCGGACTTCTGGCCTCCAGAACTGGGCAAGAAAATGTTTCTGCTGTTGGAGGCCATCCAGCTGGTGGTCATTTGTTATGGTTGCCACAGAAAACGAATATAGATTTAGACATCTAATTTGCATATATAGATATGCATGTGTATTTGTTAAATAAAAGATAAAGCATGACAAC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-MTHFSD-2]] | + | [[Category:Intergenic]][[Category:lnc-MTHFSD-2]][[Category:NONHSAG020218]] |
Revision as of 07:14, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-MTHFSD-2:6 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT144209 |
| Classification |
intergenic |
| Length |
2568 nt |
| Genomic location |
chr16-:86521316..86532172 |
| Exon number |
4 |
| Exons |
86521316..86523338,86523870..86524119,86524459..86524610,86532030..86532172 |
| Genome context |
|
| Sequence |
000001 CGGGTATCAG GATCATACTC AAACCCCAAC CCCTGCCCGC CCCAGCCAGG AGGGGAGACG GTTGGGAGTG GGAGGCCTCG 000080
000081 GCGCTGTTCT CTGGATGCAA CTGAGATTGC CGCTAGAGGG TGACGCCTGG GTCGGAATCC AAGGATTTGT GAAGAGGTGA 000160 000161 CCCAAATTTC AAGACAATGT TGGATGCAAA CGGATTTGCC AGCAACTGCA TCACTGTCAA AACCAGCTCT GCCCGTGTCT 000240 000241 TCCGAAGATA CCAAGTGAAA TACATGTAGA TGGGATTTAC ATCTGAAAAA CCAAGTGAGA AACTGAAGAC CAGAGAGGGT 000320 000321 GAGTGGTTTA CTCAGTTTGG CACAACTGAC CCCAACCTAG CCCTCCATGA GGACTGAGCG CATGAGAGAT CCTGAGCCAC 000400 000401 AGCCGCCCAG CCCTGCTCCT CTCGAATTTC TGACCTACAG GAACTGCAAG AAGTAATGAA AGACTGCTGT TTAAAGCCAC 000480 000481 TGCATTTTGG CATGATTTGT TATGCAGTCG TAGATAACCA GAAAACATCG GATTTACATT TTAAGGATTT GGTGCATGGG 000560 000561 ATGGGCTCAG TTGGGCAGTT CTTCTGTTCC ATGTGATGGT ACTGGGGCTG CAGTCATTCA GAGGCTCAAC TGGGCTGAAC 000640 000641 GTGCAAGGTT TCTTGCTCAC GTGGCCATCA GTGGTGCTGG CTGCTGTTGG GAGCTCCACT GGACTTCTGT CCAGAGCTCC 000720 000721 TCAGCTCACC TCTCTGTATC CTTGCCCTGT GGCTCAGGCT TCTAACAATA CAGAGGCTGG ATTCCAAGAG GAGGGAATTA 000800 000801 GAAGCGTTCA GCCTTCTTAA GACCAGGATT CAGATGTCCC AGACTGTCAC TGTATTGACC GGAGCATTTA CAGGCCAGCC 000880 000881 TAGTAATTTT TCCATCTTGG GCAGGAATGG GTGGCATATG CTGGGGGTAG GGGTAGCATT GTTGGGGATC ATCTTTGGAG 000960 000961 CTGTGTGCCA AGGAGTAAAT TGCTGGGCTG CTTTCTACCT GAGGAAGTCC ACTATGCTTG CTTGTGGAGA GTGGATTGTG 001040 001041 TGCTCAGAGT CCACAAGGAT TTAAGAATCC GAGCCCTGCT GCCCTTGCCT CAGCCTGTGC ATTAGGGCCC GGTGGTGAGA 001120 001121 GCACTGAGCC ATTGTGAATC AAGGCCCCTC CCTCGACCTG CATACTAACA GGCCAGAAGA GCTTGCTTGA TTTTGGTCCT 001200 001201 AGGCTCCTGC CTGTGGGTTG GATTCCAGGG GCACTCTCTC CTCCACAAAC CAGACGGTGG CAGGTACATC CCCTCAATGG 001280 001281 AAATTGCCCA CACTTCACCC TAAAGACAGA TCCTGCTGTT CAGCAACAAT GTGAGTGGCC CACACATTTG TCCAGCATGA 001360 001361 AACCGTTTGC AGATTCCTTT CCAGTACACA GTCCCGTCAG CCGGTCACTT CACGATGACA GCTCCTCGAA GCACCTTTTG 001440 001441 GTTTGCAGTT GTGTAGCTTA GAAGTAGGAG CCTGCACGGC TTCAGGAATT CACAGAAGGA GCACACTTTG TGCTTGGAGA 001520 001521 AGTTAATTAT AGGAATATCC TGCAACCTGC TGCTCTGAGC CTGTGCACCT GGGGTGTTTC CCTGGAGGTC CTGTGTATGA 001600 001601 GGATACTCAT CAGCATGGGG TTTGGGAAGC CTAGCAGTGG AGACAACCTA GGTGGTCCTC TCCAGGGGAG TAGGTAAGAG 001680 001681 CCCTACAGCA GTGAAAAGCA TTGAAGGAAA AGTGTGTTCA GCAGTGCTCT TAATCTGATC AGAGCAGCCT GAACACATTC 001760 001761 TAAACACAGG GCATTTAGAA CTAGGGTAGA GGCACTAGAG CACCATAGAT ACAAACTCAG ATTCTGAAGG TAAATGCCCA 001840 001841 GGTTCAAATC CAAGCCCCCT CGCCAAGTGA CCATGACTCC CCCGAGTCAC CTGACCTCTG TGTTTACATC CTCAAAGTTA 001920 001921 AGTAGTCAGG AAAGGGGGCT TGGGGCTTGC CACATGGATG GTTGCCACTC TCCTTTGCAA AGTGTAGTCC CCAAAAACAG 002000 002001 GTGGAAGAGG GAAGGGTCCA ATTAGAAGGC CGAGTACCAG CTGCCATGAA TATGCCAGAG CTGCTGGCTA GTGATAAATA 002080 002081 ACTGAAACCC AGGGGGACAG CAGAGCTTGG GTGACCATAC ATTCTAGGAA AGAAAACATG CCTGTTGTCC TGGCTTTTTA 002160 002161 TCCAGCTTAG ACAAAGATGG GCAAAGAAAA TAATTTAGAA AATGGTAGAG ATGGGCACAG AGAAAGGGCA CGGAGGGAGG 002240 002241 CACAAACAGA AGGCCAAGTG ATGGTGGAGG CAGACATTGG AGAAATGCCT TTACAAGCCG GGGAATGCCA AGGATGCTGG 002320 002321 CAACCCTGGG AGTGGGAAGA ACCTGGAACA CACCCTCCGT CAGAGTCTCC AGAAGGAACT GGCCCTTCAT CACCTTTCGG 002400 002401 ACTTCTGGCC TCCAGAACTG GGCAAGAAAA TGTTTCTGCT GTTGGAGGCC ATCCAGCTGG TGGTCATTTG TTATGGTTGC 002480 002481 CACAGAAAAC GAATATAGAT TTAGACATCT AATTTGCATA TATAGATATG CATGTGTATT TGTTAAATAA AAGATAAAGC 002560 002561 ATGACAAC |
