Difference between revisions of "NONHSAT078051"
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sequence = <dnaseq>AACCATGAAGCTCCTTTTTCCTATCTTTGCCAGCCTCATGCTACAGTACCAGGTGAACACAGATTTATTGGCTTGAGACGCTGTTTAATGGGTTTGGGGAGATGCAGGGATCACTGCAATGTGGATGAAAAAGAGATACAGAAATGCAAGATGAAAAAATGTTGTGTTGGACCAAAAGTGGTTAAATTGATTAAAAACTACCTGCAATATGGAACACCAAATGTACTTAATGAAGACGTCCAAGAAATGCTAAAACCTGCCAAGAATTCTAGTGCTGTGATACAAAGAAAACATATTTTATCTGTTCTCCCCCAAATCAAAAGCACTAGCTTTTTTGCTAATACCAACTTTGTCATCATTCCAAATGCCACCCCTATGAACTCTGCCACCATCAGCACTATGACCCCAGGACAGATCACATACACTGCTACTTCTACCAAGAGTAACACCAAAGAAAGCAGAGATTCTG</dnaseq>| | sequence = <dnaseq>AACCATGAAGCTCCTTTTTCCTATCTTTGCCAGCCTCATGCTACAGTACCAGGTGAACACAGATTTATTGGCTTGAGACGCTGTTTAATGGGTTTGGGGAGATGCAGGGATCACTGCAATGTGGATGAAAAAGAGATACAGAAATGCAAGATGAAAAAATGTTGTGTTGGACCAAAAGTGGTTAAATTGATTAAAAACTACCTGCAATATGGAACACCAAATGTACTTAATGAAGACGTCCAAGAAATGCTAAAACCTGCCAAGAATTCTAGTGCTGTGATACAAAGAAAACATATTTTATCTGTTCTCCCCCAAATCAAAAGCACTAGCTTTTTTGCTAATACCAACTTTGTCATCATTCCAAATGCCACCCCTATGAACTCTGCCACCATCAGCACTATGACCCCAGGACAGATCACATACACTGCTACTTCTACCAAGAGTAACACCAAAGAAAGCAGAGATTCTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG031076]] | + | [[Category:Sense]][[Category:NONHSAG031076]][[Category:Transcripts]] |
Revision as of 11:12, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT078051 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
469 nt |
| Genomic location |
chr20+:207926..210326 |
| Exon number |
2 |
| Exons |
207926..207987,209920..210326 |
| Genome context |
|
| Sequence |
000001 AACCATGAAG CTCCTTTTTC CTATCTTTGC CAGCCTCATG CTACAGTACC AGGTGAACAC AGATTTATTG GCTTGAGACG 000080
000081 CTGTTTAATG GGTTTGGGGA GATGCAGGGA TCACTGCAAT GTGGATGAAA AAGAGATACA GAAATGCAAG ATGAAAAAAT 000160 000161 GTTGTGTTGG ACCAAAAGTG GTTAAATTGA TTAAAAACTA CCTGCAATAT GGAACACCAA ATGTACTTAA TGAAGACGTC 000240 000241 CAAGAAATGC TAAAACCTGC CAAGAATTCT AGTGCTGTGA TACAAAGAAA ACATATTTTA TCTGTTCTCC CCCAAATCAA 000320 000321 AAGCACTAGC TTTTTTGCTA ATACCAACTT TGTCATCATT CCAAATGCCA CCCCTATGAA CTCTGCCACC ATCAGCACTA 000400 000401 TGACCCCAGG ACAGATCACA TACACTGCTA CTTCTACCAA GAGTAACACC AAAGAAAGCA GAGATTCTG |
Predicted Small Protein
| Name | NONHSAT078051_smProtein_143:184 |
| Length | 14 |
| Molecular weight | 1556.8254 |
| Aromaticity | 0.0769230769231 |
| Instability index | 49.9769230769 |
| Isoelectric point | 5.82061767578 |
| Runs | 4 |
| Runs residual | 0.021978021978 |
| Runs probability | 0.00865571453805 |
| Amino acid sequence | MQDEKMLCWTKSG |
| Secondary structure | LLHHHHEEELLLL |
| PRMN | - |
| PiMo | - |
