Difference between revisions of "Lnc-MTHFSD-2:10"

Revision as of 07:28, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-MTHFSD-2:10
Source	LNCipedia2.1
Same with	NONHSAT144205
Classification	intergenic
Length	2138 nt
Genomic location	chr16-:86508145..86511599
Exon number	3
Exons	86508145..86509630,86510262..86510805,86511492..86511599
Genome context
Sequence	000001 CGACACAGTG ATGGTATCTT GCAGCTGCTG CTTCTGTCCA AGGCACTGCA GCCTACTCGT CAAAAGCCCG AAGCCCAGCT 000080 000081 CTGCCAGCAG TGCACTGTGT GCTCTTAGGA AACAGAGAAG CAAAGAAGTT AGCAAGCTTG TTTTGGCAGA AGAAAAAACA 000160 000161 CAAAATACCC AACCACAGAT CCTCAAAAAT ATTGCTAAGC ACTAATTTTG CTAACATGTT AGACAGCCTT CGGATCTAGG 000240 000241 CAATCTTGTT CCTCAGCTGG AAAGAGTTCC TGCCAGCCAT GTGATTCCAA ATCCACCCTG GACATATGGG GATAATGAGA 000320 000321 AAATCAGCTC CGGCCTTCCC TGGCCTTCCA GCCAAGTGAA TGGGGGCATC CCCTGGTGCT TCAGCCCGGG GCCCACCCAG 000400 000401 AGGATGCTAG CTGGCCTGCA GAGGCCTCAA CCATGCCCTC CTGGACTCAG GTAAGACTGA GGTTTCCATG CCCTCAAAAC 000480 000481 AATTGTTCAG ACAAAAACTC ACTGCCCAGG TCAAAGTCAC AGCACCAGAA AGCCAACCTG AGGATGAAGA CAAAGCTCTT 000560 000561 TGTTGGCACA GTCCCCTGAT CATTCGAGGT CAGCATCTCC ATCAAAATGG ACCCAATGCT GAGGCAAGAA GGAGAACATC 000640 000641 ACTGTTAAGA AGATGGAAAA TGCATTTGAG GTGGACTGAA CACAGCCAGG AGTTTTTGCT TATCGACAGC ACTGAATCCT 000720 000721 GCCTTGACTA GAGAGACTCG TCATGTGATC AACTGTGGCC AGAGGGCATC CTGCAGACAG CTCCTGTCAC ACCACACTGA 000800 000801 CCAGACTCTT ATGAGTATTT AAGCATCTTC AGGGAAGCGA TTGACTGTCT TATAATGGTC TTACAAGTAC GGAACTTTAT 000880 000881 TACCTGCTAA TAATCAGAGC ACATGATGGC ACAATAGAAT ATACGAGTGA AGTTCTAAAT GCAAGGTTGT TCTTATTCTG 000960 000961 TGAGTGGCAA AACTCATGCA GTGAGCAGAT AAAGCTGGCA GGAGGCATTG GCGCCCTAAT GCTGGGCACT AACCACCTGC 001040 001041 CCGGACTGCG AATATCTGTT GGGTCCTTTC TATATCTGGT CTATTCTCGT GTTTGATTAT ATCCTGGTGG CAAGAATAGC 001120 001121 AAAATCAACT CTCCTTCCTA TCCCATGTGG AGAGGCATGA TTTGAGTCAG AGAGCATTAT CCTCTCTGCG TTATCCAACC 001200 001201 CCATGTCCCA TGATGCACTT TGTAGACAAG CAAGTGTCCC TGGTGGAGAA TCCACAGCCA CACATCCTCA TTGGTTGCAA 001280 001281 GGATCAGTGT CCAATATCTA CTGCCATGAT CATTCTCAGT TTTACATCCA CAGAGCTTCA TAGAATTCTA ACACCACAGG 001360 001361 TCCAAGTAGA GGTTTTGGCC TCAGAGTGGG CTAGATTCCA CCTCTGACAG CAGCTGTGGG ACTGTTTTTC CATCTGTAAA 001440 001441 ATGGAGACAA GAGTATCACC TACCTCATGG TGTTGGTGGG ATCGTTAAAC AGAATTCCGA TCATGAAACC CTTAGCCTGC 001520 001521 TCCCTGCATA GGCTGCATGC GCTCAGTGAG CTATGGCTCT GTTTCATGCT GACTTTACCA TCATGTAAGC AGTTTTAAAA 001600 001601 ATGCTAGAAG CTTTAGTCAT AGAATTACCA TATGATACAG CCTACTGCAG AGTCCAGAGG CTGAGGCAGG AGAGTTACTT 001680 001681 GAACCTGGGA GGCGGAGGTT GCAGTGAGCC AAGATCGCGC CACTGCACTC CAGCCTGGGC AACAGAGTGA GATTCTGTCT 001760 001761 CAACACAAAA AAGAAGACAT GTGTCCCCAT CACAGTATCA TACAGAGTGC TTCCACTGCC CTAAAATACC CTGTGCTCTT 001840 001841 CCTATTCATC CCTCTCTTCA ACCCCAGCAA CCACTGATCC TTTTACCATC TCCATGGTTT TGCCTTTCCC AGAATGTCAT 001920 001921 ATTGTTGGAA TCATACGCTA TGTAGCCTTT GCAAATGGGC TTCTTTCACC GAGCAATGTG CATTGAAGGT GCCTCTATGA 002000 002001 CTT

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CGACACAGTGATGGTATCTTGCAGCTGCTGCTTCTGTCCAAGGCACTGCAGCCTACTCGTCAAAAGCCCGAAGCCCAGCTCTGCCAGCAGTGCACTGTGTGCTCTTAGGAAACAGAGAAGCAAAGAAGTTAGCAAGCTTGTTTTGGCAGAAGAAAAAACACAAAATACCCAACCACAGATCCTCAAAAATATTGCTAAGCACTAATTTTGCTAACATGTTAGACAGCCTTCGGATCTAGGCAATCTTGTTCCTCAGCTGGAAAGAGTTCCTGCCAGCCATGTGATTCCAAATCCACCCTGGACATATGGGGATAATGAGAAAATCAGCTCCGGCCTTCCCTGGCCTTCCAGCCAAGTGAATGGGGGCATCCCCTGGTGCTTCAGCCCGGGGCCCACCCAGAGGATGCTAGCTGGCCTGCAGAGGCCTCAACCATGCCCTCCTGGACTCAGGTAAGACTGAGGTTTCCATGCCCTCAAAACAATTGTTCAGACAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCTTTGTTGGCACAGTCCCCTGATCATTCGAGGTCAGCATCTCCATCAAAATGGACCCAATGCTGAGGCAAGAAGGAGAACATCACTGTTAAGAAGATGGAAAATGCATTTGAGGTGGACTGAACACAGCCAGGAGTTTTTGCTTATCGACAGCACTGAATCCTGCCTTGACTAGAGAGACTCGTCATGTGATCAACTGTGGCCAGAGGGCATCCTGCAGACAGCTCCTGTCACACCACACTGACCAGACTCTTATGAGTATTTAAGCATCTTCAGGGAAGCGATTGACTGTCTTATAATGGTCTTACAAGTACGGAACTTTATTACCTGCTAATAATCAGAGCACATGATGGCACAATAGAATATACGAGTGAAGTTCTAAATGCAAGGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGATAAAGCTGGCAGGAGGCATTGGCGCCCTAATGCTGGGCACTAACCACCTGCCCGGACTGCGAATATCTGTTGGGTCCTTTCTATATCTGGTCTATTCTCGTGTTTGATTATATCCTGGTGGCAAGAATAGCAAAATCAACTCTCCTTCCTATCCCATGTGGAGAGGCATGATTTGAGTCAGAGAGCATTATCCTCTCTGCGTTATCCAACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACATCCTCATTGGTTGCAAGGATCAGTGTCCAATATCTACTGCCATGATCATTCTCAGTTTTACATCCACAGAGCTTCATAGAATTCTAACACCACAGGTCCAAGTAGAGGTTTTGGCCTCAGAGTGGGCTAGATTCCACCTCTGACAGCAGCTGTGGGACTGTTTTTCCATCTGTAAAATGGAGACAAGAGTATCACCTACCTCATGGTGTTGGTGGGATCGTTAAACAGAATTCCGATCATGAAACCCTTAGCCTGCTCCCTGCATAGGCTGCATGCGCTCAGTGAGCTATGGCTCTGTTTCATGCTGACTTTACCATCATGTAAGCAGTTTTAAAAATGCTAGAAGCTTTAGTCATAGAATTACCATATGATACAGCCTACTGCAGAGTCCAGAGGCTGAGGCAGGAGAGTTACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGATTCTGTCTCAACACAAAAAAGAAGACATGTGTCCCCATCACAGTATCATACAGAGTGCTTCCACTGCCCTAAAATACCCTGTGCTCTTCCTATTCATCCCTCTCTTCAACCCCAGCAACCACTGATCCTTTTACCATCTCCATGGTTTTGCCTTTCCCAGAATGTCATATTGTTGGAATCATACGCTATGTAGCCTTTGCAAATGGGCTTCTTTCACCGAGCAATGTGCATTGAAGGTGCCTCTATGACTTTTCAAGGGTTGATAGCTCATTCCTTTTTATTGCTAAATAATATTCCATTGTCTGAATGTACCACATTTTGTTTATCCATTCACCTACTAAAGGACATCTTGGTTGCTTCCAAGTTTGGGCAATTATAAATAAAAC</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-MTHFSD-2]]
+[[Category:Intergenic]][[Category:lnc-MTHFSD-2]][[Category:NONHSAG020218]]