Difference between revisions of "Lnc-CALCOCO1-1:1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>CGGAGACTGCGGCAAAAAGAGGAAAGGAGGGTTACGGGCACCGAGGGGGAGCTGGAGTCAGCCGCAAGGAGAGAGGGAGCGGGGGAGGAAAAGAGGCGGGAGAGAGACCCTAAAAAGCAAGCTAGACTCTCCAGCCGGCCGCTCTGGTGTGGGGAGGGAGCGTCATCTCAAGGACACTGAAAAAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGAGAGAGACAGACGGCAATGCTTGGGTAGCCAGGGCTCCCTGCCGGCCCCACTCCTCCTGCAGACACGAGCACGCACACACACACGCGCGCAAAACACACACGCTGCCCTTCGCCACACGTAGCCAAGTAAAATACACAAAAAGCAACTGAGATACCATTCGCACATGACCACATGGAAACACACAAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGGGGTACAAAGCCACATGGCACAAAGCCACCTGGATGTATATGCCCCTACACACGCACACAGAAAAAAACATGCAAACTTAAGTACACACCTATCCAGACAAGTGTGAGTGCACACACACACACACTCACACACTCTACCTGACACGTTAGTGCATCCCCATTGGGCCCCAGTTTCTCTCAGCAAATTCAGATCACCCAGCCTGACTTCAAAACCTGCCCCCTTCCATTCCCCTTCATGCTGGTTCCTGAATCCAGCTCGTTGCTCCAGGCTAGCAAAGCTGTCCACAGCCTCATTTGTGGTTTGCTCACCTGCCTCAGCACCATCAGCCAGAGGGGGCGAGGAACGCGGCTCTGCGGAGGAGCGGAATCTTCTCAGCAGCGATCTGCGAAGGGCTCAGCGGCCACAGGAGGGCGGCAGAGAACAGCGCTCCCTACAGATCCAGACGTCGGCCCTGGATGCTGTCTGGAATCCAGCACTGGGGCTGCTGGCACAGAAGGACCCTGTGGCTTTTCCTTCATGGTATAGCAGATGACACCCACGCTCCTCCGTGACATTCCCTAGGGTCCCAGCTGATAACTGGAGCTAGAACTAGAACCCACGACTTCTTGGTTCTCTGCGCAGGGGTCTTCCCATTGTGTCAGCTGCAGCTCCTGAAATAAAACCATACCCTACAGGCCACAACCAGACAGCATCTCAAATCCCTGGCTTAAACAATCAATGCCAAAGCTACTGTGTTCCATATGTTTACATATGGAACTGGTGCATACAAGACTGTTAACCCAGGACACAGATGTGTGCTGTAGCTACCTGGCTGTGCACCCCTCATCCTCAGGTACATGGCCCTCTGTCCCTTCTCTTCCTACTTTCTGAACTGCAAAAGAAGCTTCTCTTCATTTATAATTTGGCCTTTTCACTGGAGTTCCAGAAACTCCTCAAAGCTGTAGACACAGAAGCCCTTTCCCAGTTCTAACCTTG</dnaseq>| | sequence = <dnaseq>CGGAGACTGCGGCAAAAAGAGGAAAGGAGGGTTACGGGCACCGAGGGGGAGCTGGAGTCAGCCGCAAGGAGAGAGGGAGCGGGGGAGGAAAAGAGGCGGGAGAGAGACCCTAAAAAGCAAGCTAGACTCTCCAGCCGGCCGCTCTGGTGTGGGGAGGGAGCGTCATCTCAAGGACACTGAAAAAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGAGAGAGACAGACGGCAATGCTTGGGTAGCCAGGGCTCCCTGCCGGCCCCACTCCTCCTGCAGACACGAGCACGCACACACACACGCGCGCAAAACACACACGCTGCCCTTCGCCACACGTAGCCAAGTAAAATACACAAAAAGCAACTGAGATACCATTCGCACATGACCACATGGAAACACACAAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGGGGTACAAAGCCACATGGCACAAAGCCACCTGGATGTATATGCCCCTACACACGCACACAGAAAAAAACATGCAAACTTAAGTACACACCTATCCAGACAAGTGTGAGTGCACACACACACACACTCACACACTCTACCTGACACGTTAGTGCATCCCCATTGGGCCCCAGTTTCTCTCAGCAAATTCAGATCACCCAGCCTGACTTCAAAACCTGCCCCCTTCCATTCCCCTTCATGCTGGTTCCTGAATCCAGCTCGTTGCTCCAGGCTAGCAAAGCTGTCCACAGCCTCATTTGTGGTTTGCTCACCTGCCTCAGCACCATCAGCCAGAGGGGGCGAGGAACGCGGCTCTGCGGAGGAGCGGAATCTTCTCAGCAGCGATCTGCGAAGGGCTCAGCGGCCACAGGAGGGCGGCAGAGAACAGCGCTCCCTACAGATCCAGACGTCGGCCCTGGATGCTGTCTGGAATCCAGCACTGGGGCTGCTGGCACAGAAGGACCCTGTGGCTTTTCCTTCATGGTATAGCAGATGACACCCACGCTCCTCCGTGACATTCCCTAGGGTCCCAGCTGATAACTGGAGCTAGAACTAGAACCCACGACTTCTTGGTTCTCTGCGCAGGGGTCTTCCCATTGTGTCAGCTGCAGCTCCTGAAATAAAACCATACCCTACAGGCCACAACCAGACAGCATCTCAAATCCCTGGCTTAAACAATCAATGCCAAAGCTACTGTGTTCCATATGTTTACATATGGAACTGGTGCATACAAGACTGTTAACCCAGGACACAGATGTGTGCTGTAGCTACCTGGCTGTGCACCCCTCATCCTCAGGTACATGGCCCTCTGTCCCTTCTCTTCCTACTTTCTGAACTGCAAAAGAAGCTTCTCTTCATTTATAATTTGGCCTTTTCACTGGAGTTCCAGAAACTCCTCAAAGCTGTAGACACAGAAGCCCTTTCCCAGTTCTAACCTTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-CALCOCO1-1]] | + | [[Category:Intergenic]][[Category:lnc-CALCOCO1-1]][[Category:NONHSAG011257]] |
Revision as of 07:37, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
lnc-CALCOCO1-1:1 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT028494 |
| Classification |
intergenic |
| Length |
1477 nt |
| Genomic location |
chr12-:54139830..54145742 |
| Exon number |
4 |
| Exons |
54139830..54140331,54140492..54140632,54144101..54144749,54145558..54145742 |
| Genome context |
|
| Sequence |
000001 CGGAGACTGC GGCAAAAAGA GGAAAGGAGG GTTACGGGCA CCGAGGGGGA GCTGGAGTCA GCCGCAAGGA GAGAGGGAGC 000080
000081 GGGGGAGGAA AAGAGGCGGG AGAGAGACCC TAAAAAGCAA GCTAGACTCT CCAGCCGGCC GCTCTGGTGT GGGGAGGGAG 000160 000161 CGTCATCTCA AGGACACTGA AAAAGCTGTT TGCCGTTTTG CTGTTTGCCT CCTTGTCACG ACCTCAGCGA CGGCAGATGG 000240 000241 AGCCAGTGGA GGGAGAGAGA CAGACGGCAA TGCTTGGGTA GCCAGGGCTC CCTGCCGGCC CCACTCCTCC TGCAGACACG 000320 000321 AGCACGCACA CACACACGCG CGCAAAACAC ACACGCTGCC CTTCGCCACA CGTAGCCAAG TAAAATACAC AAAAAGCAAC 000400 000401 TGAGATACCA TTCGCACATG ACCACATGGA AACACACAAA TGAACAAACG CATTCAGGCA TAGCCACATG CCAGTCACAC 000480 000481 AGATGGATAG ACAAGAGCCT GGGGTACAAA GCCACATGGC ACAAAGCCAC CTGGATGTAT ATGCCCCTAC ACACGCACAC 000560 000561 AGAAAAAAAC ATGCAAACTT AAGTACACAC CTATCCAGAC AAGTGTGAGT GCACACACAC ACACACTCAC ACACTCTACC 000640 000641 TGACACGTTA GTGCATCCCC ATTGGGCCCC AGTTTCTCTC AGCAAATTCA GATCACCCAG CCTGACTTCA AAACCTGCCC 000720 000721 CCTTCCATTC CCCTTCATGC TGGTTCCTGA ATCCAGCTCG TTGCTCCAGG CTAGCAAAGC TGTCCACAGC CTCATTTGTG 000800 000801 GTTTGCTCAC CTGCCTCAGC ACCATCAGCC AGAGGGGGCG AGGAACGCGG CTCTGCGGAG GAGCGGAATC TTCTCAGCAG 000880 000881 CGATCTGCGA AGGGCTCAGC GGCCACAGGA GGGCGGCAGA GAACAGCGCT CCCTACAGAT CCAGACGTCG GCCCTGGATG 000960 000961 CTGTCTGGAA TCCAGCACTG GGGCTGCTGG CACAGAAGGA CCCTGTGGCT TTTCCTTCAT GGTATAGCAG ATGACACCCA 001040 001041 CGCTCCTCCG TGACATTCCC TAGGGTCCCA GCTGATAACT GGAGCTAGAA CTAGAACCCA CGACTTCTTG GTTCTCTGCG 001120 001121 CAGGGGTCTT CCCATTGTGT CAGCTGCAGC TCCTGAAATA AAACCATACC CTACAGGCCA CAACCAGACA GCATCTCAAA 001200 001201 TCCCTGGCTT AAACAATCAA TGCCAAAGCT ACTGTGTTCC ATATGTTTAC ATATGGAACT GGTGCATACA AGACTGTTAA 001280 001281 CCCAGGACAC AGATGTGTGC TGTAGCTACC TGGCTGTGCA CCCCTCATCC TCAGGTACAT GGCCCTCTGT CCCTTCTCTT 001360 001361 CCTACTTTCT GAACTGCAAA AGAAGCTTCT CTTCATTTAT AATTTGGCCT TTTCACTGGA GTTCCAGAAA CTCCTCAAAG 001440 001441 CTGTAGACAC AGAAGCCCTT TCCCAGTTCT AACCTTG |
