Difference between revisions of "NONHSAT078943"

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sequence = <dnaseq>AATGAAGGATAGTTAGATGTAGAAGGTAAAACAAAAGGAATCAGCTTTTTGTGTCTGTGACAGAGGATCTGATACTTGATGGTCTGACCACAAGGCATCGCTCAGAAATCAGCAGTCCTTTTCACCCAGTGAACAGCCAGCTGCTTTGAGCAGAGAGAGCTGTGGTTGGAACTCCTGCTCTGTGACTCAGGGGAGGAGGCAGAGCTTGCCGCAGAATGCAGCCACTGCCCACAGCCCCTGTGCACTCCCTTTTCCCTTGTGCTGGCTTCCCGCTGCCAGCATCTGCAAGTCTCTGCCTGGAGGTGAGCAGGAGGGTGCTGGGCCCATTAGACAGGTGGCTAGGGCTGGGGAGTTCATGGTCTTCACGCAGTTTCAGGTGGAGGTTGCAggatatatggcccagcttcctggccccaggtggaacaaccctgagacatgttcgccatttcccacaggcccccagtgggactgagccctagttgtcttcagtggcaatcttctcattaccacctctcgtgttgattctttttcccttcactttctcatttttccatttccttgttggtccccattaactacttgcacatgaatctttgtctcagggtctgcatctgggggaccccaaaGACACAGACACTTGAGCTGTTACTCTGCCTTTATCTTAGACCTAGCATTGGTCTCCAGAGGTCACTCATGACTTCAGGGCCTATTTTAATGGCCTCTTTCCCCATGTGTTCCTTGGGAATGTCCATTGTTGATGCGTCCTTCTGTACTAAGTAGAGTTTTTGGGCTGCAAGGAGGCAGTTAGCACAGGGAACTACGTAGTGAGGGACATGGAGACTAAACAGCAGCTGGCCCATCTCTCTGGCTTCTCATGGCCAAGCCTGGGACACACAGCTGCCCTCGTGCAGGTCCAGAACTATGGCACTTGTTCCCTCAGGACCCATCCTCAAAGCCAGTGACTTGGTCTTTTCCTATGACAAAGGAGCTCCCAGAATGTGGCAGTCCCCCTTCCTAGAGGGAGAATCTGACTGGGTCAGGGAGGCACCCCCGGTTTGCAGAGCCCCCATTGGTCAGGTTCAGTGTCCAAAACACCTGAGGGGCAAGTGGCTTCTCGAAGTCCAGCCCATATGGTTACTTTTGACTTGGACACTCAAGGCACAGGGACACATGACACAGGCACAGGGTGTGACAACTGCATGCAGAAAGAGCCACTCTCATTCCTCAGAAGAGGCTGTGGAGATGAGTggctgagccatgtgccccaaaattcatgttgaagtcctaacccccagtatcttaaaatgtgaccatatttagaaatagaacctttaaagagctaactgggttaaaatgaattcattagggtaggccctacttcagtatgaccggtgtctttagcagaagaagaaatcggtacagacacgcagaggggagggcatgtgaggacatgggaaggaaatgccacttgcaagccaaggagagaggcctcagaagaaaccagccctcctgacaccttgatcctagacttccagcctccagaactgtaagaaaatacatttctgttgtttaagccacctggtcttagagttctatCTTGAATTTCTCTCTGCTTCAGACTTTTCTGTTTTGTTTTTTAGCCTAAATGCTATTGAAAAGAGCAGAGAAGATAGAGTGCAGGCCCCTAGAGACAGGATGGAACGAAACACGCAGTGTGCATCTGTGTCCTGCTCAGCATACGCTCTTGGTCCCCACTGGGCCATCTCGCTGCTGACTGGCATCCCGAAGAACAGGCAGATTGCACAGGGGCAGCTCTTTCCTCCAAAGCTGCAATGTGGTGCATGAAGTCCTCAGATTTGGGAACTCATACAGGCACTTGAGCTCAAACATACAGTTCTGATCTAAGACATCACAGGGTCATGGTGGAGCTGTTTCAGCTGCAGGTGGTATTCCACCATTTGGTCCTCCCTGATGTCTCCTGGCACCTTTCCTTCTTCAGTCTCAGCACTCTGAAGAAGCGTGCTTGTGAGCGCCGCGGGACGATCCAGGATGTCCAGGATTGTGGACGATCCTGTTCTTCCCATCTGTGAGGTAAGGCAGATTAGGAATGTCCACGTCTAGCTTGAATTTCACATCCAGCCATTGGCTGCCACCATGGCCAGGGGCTTCTGCAGATGGATCACCGTTTCCCTCCCAGGAGCAGGCAGGTGTCCAGTATCAGCCCCAGAACATCCCGGTCACCCATCTCCATAGGGCTTGGATGACATGATGATGCTCTCTGTGCCTCTGAGGACGGCGCCTTGGGTCTTTGTACACTAAATCCCACCTTGTCCTCTCCTCTATTTGAAACAGCCATTTCCCAAATCCCAATCTGATGAAATCCTGTTCTTCCTTCCCTCATGTTTCTCTAGGCCTCCTGTGGACTCCCAGAATGTAAAGTCAGCATTCCCTTGAGCCTTTTGGGGACTTATAAGCACATGGCCCAAGGTCCACCTAACTCTAGGTGTATCCTGTAGAACCAGTATTCTAATCCTAACTTTAAAGATCTTACAGGACCATAGGGTGTGCGTAAAAAGCCTGCTGCAAATCAGAGTGCTTCAACTGCGTATTAATGAGATGGAGGAAAGAGGCTGTGAGTGCAGACAATGAGTCCCTGAGTAAATAGACTCCAGAGCCAAAGGTGTTCTCCACACCGAAAGAATGACTGTACCCAGGGAAGGAGCTCAGACTCACCTGGACAAACCCTGAGGGGACAGCCATGTTCCAGTGTGGCTAGGAGGGTCTGGAGCTGGGCACGTCCCCCATGTCTGCTTGATTCCCCTCTGGCCGAGTTCTACTCAGGTGAGTTGTGCTCATTCTTGCTTCCCCAGGGCCTGGATCACAgttcctcaagctttgggatacaaacgaatcacctgggatttggataaaatgcagattcgtgttcagcagccctggcattctgcatttctcatgagctccagggagacgctggtgctgctggggcaggaccacactttgggtggcaaggGCTTGGCAGGCAATTCCAGGTGTCACCCTAGAGATG</dnaseq>|
 
sequence = <dnaseq>AATGAAGGATAGTTAGATGTAGAAGGTAAAACAAAAGGAATCAGCTTTTTGTGTCTGTGACAGAGGATCTGATACTTGATGGTCTGACCACAAGGCATCGCTCAGAAATCAGCAGTCCTTTTCACCCAGTGAACAGCCAGCTGCTTTGAGCAGAGAGAGCTGTGGTTGGAACTCCTGCTCTGTGACTCAGGGGAGGAGGCAGAGCTTGCCGCAGAATGCAGCCACTGCCCACAGCCCCTGTGCACTCCCTTTTCCCTTGTGCTGGCTTCCCGCTGCCAGCATCTGCAAGTCTCTGCCTGGAGGTGAGCAGGAGGGTGCTGGGCCCATTAGACAGGTGGCTAGGGCTGGGGAGTTCATGGTCTTCACGCAGTTTCAGGTGGAGGTTGCAggatatatggcccagcttcctggccccaggtggaacaaccctgagacatgttcgccatttcccacaggcccccagtgggactgagccctagttgtcttcagtggcaatcttctcattaccacctctcgtgttgattctttttcccttcactttctcatttttccatttccttgttggtccccattaactacttgcacatgaatctttgtctcagggtctgcatctgggggaccccaaaGACACAGACACTTGAGCTGTTACTCTGCCTTTATCTTAGACCTAGCATTGGTCTCCAGAGGTCACTCATGACTTCAGGGCCTATTTTAATGGCCTCTTTCCCCATGTGTTCCTTGGGAATGTCCATTGTTGATGCGTCCTTCTGTACTAAGTAGAGTTTTTGGGCTGCAAGGAGGCAGTTAGCACAGGGAACTACGTAGTGAGGGACATGGAGACTAAACAGCAGCTGGCCCATCTCTCTGGCTTCTCATGGCCAAGCCTGGGACACACAGCTGCCCTCGTGCAGGTCCAGAACTATGGCACTTGTTCCCTCAGGACCCATCCTCAAAGCCAGTGACTTGGTCTTTTCCTATGACAAAGGAGCTCCCAGAATGTGGCAGTCCCCCTTCCTAGAGGGAGAATCTGACTGGGTCAGGGAGGCACCCCCGGTTTGCAGAGCCCCCATTGGTCAGGTTCAGTGTCCAAAACACCTGAGGGGCAAGTGGCTTCTCGAAGTCCAGCCCATATGGTTACTTTTGACTTGGACACTCAAGGCACAGGGACACATGACACAGGCACAGGGTGTGACAACTGCATGCAGAAAGAGCCACTCTCATTCCTCAGAAGAGGCTGTGGAGATGAGTggctgagccatgtgccccaaaattcatgttgaagtcctaacccccagtatcttaaaatgtgaccatatttagaaatagaacctttaaagagctaactgggttaaaatgaattcattagggtaggccctacttcagtatgaccggtgtctttagcagaagaagaaatcggtacagacacgcagaggggagggcatgtgaggacatgggaaggaaatgccacttgcaagccaaggagagaggcctcagaagaaaccagccctcctgacaccttgatcctagacttccagcctccagaactgtaagaaaatacatttctgttgtttaagccacctggtcttagagttctatCTTGAATTTCTCTCTGCTTCAGACTTTTCTGTTTTGTTTTTTAGCCTAAATGCTATTGAAAAGAGCAGAGAAGATAGAGTGCAGGCCCCTAGAGACAGGATGGAACGAAACACGCAGTGTGCATCTGTGTCCTGCTCAGCATACGCTCTTGGTCCCCACTGGGCCATCTCGCTGCTGACTGGCATCCCGAAGAACAGGCAGATTGCACAGGGGCAGCTCTTTCCTCCAAAGCTGCAATGTGGTGCATGAAGTCCTCAGATTTGGGAACTCATACAGGCACTTGAGCTCAAACATACAGTTCTGATCTAAGACATCACAGGGTCATGGTGGAGCTGTTTCAGCTGCAGGTGGTATTCCACCATTTGGTCCTCCCTGATGTCTCCTGGCACCTTTCCTTCTTCAGTCTCAGCACTCTGAAGAAGCGTGCTTGTGAGCGCCGCGGGACGATCCAGGATGTCCAGGATTGTGGACGATCCTGTTCTTCCCATCTGTGAGGTAAGGCAGATTAGGAATGTCCACGTCTAGCTTGAATTTCACATCCAGCCATTGGCTGCCACCATGGCCAGGGGCTTCTGCAGATGGATCACCGTTTCCCTCCCAGGAGCAGGCAGGTGTCCAGTATCAGCCCCAGAACATCCCGGTCACCCATCTCCATAGGGCTTGGATGACATGATGATGCTCTCTGTGCCTCTGAGGACGGCGCCTTGGGTCTTTGTACACTAAATCCCACCTTGTCCTCTCCTCTATTTGAAACAGCCATTTCCCAAATCCCAATCTGATGAAATCCTGTTCTTCCTTCCCTCATGTTTCTCTAGGCCTCCTGTGGACTCCCAGAATGTAAAGTCAGCATTCCCTTGAGCCTTTTGGGGACTTATAAGCACATGGCCCAAGGTCCACCTAACTCTAGGTGTATCCTGTAGAACCAGTATTCTAATCCTAACTTTAAAGATCTTACAGGACCATAGGGTGTGCGTAAAAAGCCTGCTGCAAATCAGAGTGCTTCAACTGCGTATTAATGAGATGGAGGAAAGAGGCTGTGAGTGCAGACAATGAGTCCCTGAGTAAATAGACTCCAGAGCCAAAGGTGTTCTCCACACCGAAAGAATGACTGTACCCAGGGAAGGAGCTCAGACTCACCTGGACAAACCCTGAGGGGACAGCCATGTTCCAGTGTGGCTAGGAGGGTCTGGAGCTGGGCACGTCCCCCATGTCTGCTTGATTCCCCTCTGGCCGAGTTCTACTCAGGTGAGTTGTGCTCATTCTTGCTTCCCCAGGGCCTGGATCACAgttcctcaagctttgggatacaaacgaatcacctgggatttggataaaatgcagattcgtgttcagcagccctggcattctgcatttctcatgagctccagggagacgctggtgctgctggggcaggaccacactttgggtggcaaggGCTTGGCAGGCAATTCCAGGTGTCACCCTAGAGATG</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG031423]]
+
[[Category:Intergenic]][[Category:NONHSAG031423]][[Category:Transcripts]]

Latest revision as of 23:55, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT078943

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3067 nt

Genomic location

chr20-:21481165..21484354

Exon number

2

Exons

21481165..21482316,21482440..21484354

Genome context

Sequence
000001 AATGAAGGAT AGTTAGATGT AGAAGGTAAA ACAAAAGGAA TCAGCTTTTT GTGTCTGTGA CAGAGGATCT GATACTTGAT 000080
000081 GGTCTGACCA CAAGGCATCG CTCAGAAATC AGCAGTCCTT TTCACCCAGT GAACAGCCAG CTGCTTTGAG CAGAGAGAGC 000160
000161 TGTGGTTGGA ACTCCTGCTC TGTGACTCAG GGGAGGAGGC AGAGCTTGCC GCAGAATGCA GCCACTGCCC ACAGCCCCTG 000240
000241 TGCACTCCCT TTTCCCTTGT GCTGGCTTCC CGCTGCCAGC ATCTGCAAGT CTCTGCCTGG AGGTGAGCAG GAGGGTGCTG 000320
000321 GGCCCATTAG ACAGGTGGCT AGGGCTGGGG AGTTCATGGT CTTCACGCAG TTTCAGGTGG AGGTTGCAgg atatatggcc 000400
000401 cagcttcctg gccccaggtg gaacaaccct gagacatgtt cgccatttcc cacaggcccc cagtgggact gagccctagt 000480
000481 tgtcttcagt ggcaatcttc tcattaccac ctctcgtgtt gattcttttt cccttcactt tctcattttt ccatttcctt 000560
000561 gttggtcccc attaactact tgcacatgaa tctttgtctc agggtctgca tctgggggac cccaaaGACA CAGACACTTG 000640
000641 AGCTGTTACT CTGCCTTTAT CTTAGACCTA GCATTGGTCT CCAGAGGTCA CTCATGACTT CAGGGCCTAT TTTAATGGCC 000720
000721 TCTTTCCCCA TGTGTTCCTT GGGAATGTCC ATTGTTGATG CGTCCTTCTG TACTAAGTAG AGTTTTTGGG CTGCAAGGAG 000800
000801 GCAGTTAGCA CAGGGAACTA CGTAGTGAGG GACATGGAGA CTAAACAGCA GCTGGCCCAT CTCTCTGGCT TCTCATGGCC 000880
000881 AAGCCTGGGA CACACAGCTG CCCTCGTGCA GGTCCAGAAC TATGGCACTT GTTCCCTCAG GACCCATCCT CAAAGCCAGT 000960
000961 GACTTGGTCT TTTCCTATGA CAAAGGAGCT CCCAGAATGT GGCAGTCCCC CTTCCTAGAG GGAGAATCTG ACTGGGTCAG 001040
001041 GGAGGCACCC CCGGTTTGCA GAGCCCCCAT TGGTCAGGTT CAGTGTCCAA AACACCTGAG GGGCAAGTGG CTTCTCGAAG 001120
001121 TCCAGCCCAT ATGGTTACTT TTGACTTGGA CACTCAAGGC ACAGGGACAC ATGACACAGG CACAGGGTGT GACAACTGCA 001200
001201 TGCAGAAAGA GCCACTCTCA TTCCTCAGAA GAGGCTGTGG AGATGAGTgg ctgagccatg tgccccaaaa ttcatgttga 001280
001281 agtcctaacc cccagtatct taaaatgtga ccatatttag aaatagaacc tttaaagagc taactgggtt aaaatgaatt 001360
001361 cattagggta ggccctactt cagtatgacc ggtgtcttta gcagaagaag aaatcggtac agacacgcag aggggagggc 001440
001441 atgtgaggac atgggaagga aatgccactt gcaagccaag gagagaggcc tcagaagaaa ccagccctcc tgacaccttg 001520
001521 atcctagact tccagcctcc agaactgtaa gaaaatacat ttctgttgtt taagccacct ggtcttagag ttctatCTTG 001600
001601 AATTTCTCTC TGCTTCAGAC TTTTCTGTTT TGTTTTTTAG CCTAAATGCT ATTGAAAAGA GCAGAGAAGA TAGAGTGCAG 001680
001681 GCCCCTAGAG ACAGGATGGA ACGAAACACG CAGTGTGCAT CTGTGTCCTG CTCAGCATAC GCTCTTGGTC CCCACTGGGC 001760
001761 CATCTCGCTG CTGACTGGCA TCCCGAAGAA CAGGCAGATT GCACAGGGGC AGCTCTTTCC TCCAAAGCTG CAATGTGGTG 001840
001841 CATGAAGTCC TCAGATTTGG GAACTCATAC AGGCACTTGA GCTCAAACAT ACAGTTCTGA TCTAAGACAT CACAGGGTCA 001920
001921 TGGTGGAGCT GTTTCAGCTG CAGGTGGTAT TCCACC