Difference between revisions of "NONHSAT144204"

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sequence = <dnaseq>AGCAGACAGCGCGGGCTGGGAGCGCCGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGCTGGGGGCGGTGGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTACTTCATGCACATAAAAGAAAACGCAACTACAGTGGACCCTGAACAACCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCACATACCCCGACACAGTGATGGTATCTTGCAGCTGCTGCTTCTGTCCAAGGCACTGCAGCCTACTCGTCAAAAGCCCGAAGCCCAGCTCTGCCAGCAGTGCACTGTGTGCTCTTAGGAAACAGAGAAGCAAAGAAGTTAGCAAGCTTGTTTTGGCAGAAGAAAAAACACAAAATACCCAACCACAGATCCTCAAAAATATTGCTAAGCACTAATTTTGCTAACATGTTAGACAGCCTTCGGATCTAGGCAATCTTGTTCCTCAGCTGGAAAGAGTTCCTGCCAGCCATGTGATTCCAAATCCACCCTGGACATATGGGGATAATGAGAAAATCAGCTCCGGCCTTCCCTGGCCTTCCAGCCAAGTGAATGGGGGCATCCCCTGGTGCTTCAGCCCGGGGCCCACCCAGAGGATGCTAGCTGGCCTGCAGAGGCCTCAACCATGCCCTCCTGGACTCAGGTAAGACTGAGGTTTCCGTGCCCTCAAAACAATTGTTCAGACAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCTTTGTTGGCACAGTCCCCTGATCATTCGAGGTCAGCATCTCCATCAAAATGGACCCAATGCTGAGGCAAGAAGGAGAACATCACTGTTAAGAAGGTAATGAGTCACAAATGCTATTTCGATGGTTTTCTTTGAAAGAAATACACAGAACCAAACCAATTTTAATTAAAGATCTTGTCTTTGTAATCAGGCAGCCACAAATGAAGGCAAAACTGCTTTCATGTGGCATAATATACACAGAGCTGAACTAGTTTTCCCATAAAAGGGCAGGTTCTTTTCTTCAAATAAGAAAAGAGTTTGTTCCTAACAATATGGGGGATGCAACAGAAAGCTGTCTTTTGCAAAGTATAAAATTGCAGATCCTCCCGTGGAAGCCATTTCTTGATGCTAAACCAATGCGAACGTTTGCCAAACGCACATGCGAGCCGGGATTATCCTACCCTTTGAGATTAGACATGTGATCCTGATTTTTAAGTGAAAAACGCAGCCAGAGGCCAAATAAACATACCTACAAGTACATCGAAAGCTCAAATGGTTGAGAAATGATTGTAACACACCCCGGTGTGTATTTCCGAGGAAGAATCAACATGCACATGGAAATTGATGTTTTGATTTTTAATTTTAAAACGACGACAGAACTGAAATACCTCCCCTAACTAGGTCCACTGAAACCAGTGAGGAGATAATCATTTTCAGTTAAATATGCATGTAATTTAATAATCCACAGATGGAAAATGCATTTGAGGTGGACTGAACACAGCCAGGAGTTTTTGCTTATCGACAGCACTGAATCCTGCCTTGACTAGAGAGACTCGTCATGTGATCAACTGTGGCCAGAGGGCATCCTGCAGACAGCTCCTGTCACACCACACTGACCAGACTCTTATGAGTATTTAAGCATCTTCAGGGAAGCGATTGACTGTCTTATAATGGTCTTACAAGTACGGAACTTTATTACCTGCTAATAATCAGAGCACATGATGGCACAATAGAATATACGAGTGAAGTTCTAAATGCAAGGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGATAAAGCTGGCAGGGGGCATTGGCGCCCTAATGCTGGGCACTAACCACCTGCCCGGACTGCGAATATCTGTTGGGTCCTTTCTATATCTGGTCTATTCTCGTGTTTGATTATATCCTGGTGGCAAGAATAGCAAAATCAACTCTCCTTCCTATCCCATGTGGAGAGGCATGATTTGAGTCAGAGAGCATTATCCTCTCTGCGTTACCCAACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACATCCTCATTGGTTGCAAGGATCAGTGTCCAATATCTACTGCCATGATCATTCTCAGTTTTACATCCACAGAGCTTCATAGAATTCTAACACCACAGGTCCAAGTAGAGGTTTTGGCCTCAGAGTGGGCTAGATTCCACCTCTGACAGCAGCTGTGGGACTGTTTTTCCATCTGTAAAATGGAGACAAGAGTATCACCTACCTCATGGTGTTGGTGGGATCGTTAAACAGAATTCTGATCATGAAACCCTTAGCCTGCTCCCTGCATAGGCTGCATGCGCTCAGTGAGCTATGGCTCTGTTTCATGCTGACTTTACCATCATGTAAGCAGTTTTAAAAATGCTAGAAGCTTTAGTCATAGAATTACCATATGATACAGCCTACTGCAGAGTCCAGAGGCTGAGGCAGGAGAGTTACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGCGCCTGCACTCCAGCCTGGGCAACAGAGTGAGATTCTGTCTCAACACAAAAAAGAAGACATGTGTCCCCATCACAGTATCATACAGAGTGCTTCCACTGCCCTAAAATACCCTGTGCTCTTCCTATTCATCCCTCTCTTCAACCCCAGCAACCACTGATCCTTTTACCATCTCCATGGTTTTGCCTTTCCCAGAATGTCATATTGTTGGAATCATACGCTATGTAGCCTTTGCAAATGGGCTTCTTTCACTGAGCAATGTGCATTGAAGGTGCCTCTATGTCTTTTCAAGGGTTGATAGCTCATTCCTTTTTATTGCTAAATAATATTCCATTGTCTGAATGTACCACATTTTGTTTATCCATTCACCTACTAAAGGACATCTTGGTTGCTTCCAAGTTTGGGCAATTATAAATAAAACTGCTATAAAC</dnaseq>|
 
sequence = <dnaseq>AGCAGACAGCGCGGGCTGGGAGCGCCGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGCTGGGGGCGGTGGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTACTTCATGCACATAAAAGAAAACGCAACTACAGTGGACCCTGAACAACCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCACATACCCCGACACAGTGATGGTATCTTGCAGCTGCTGCTTCTGTCCAAGGCACTGCAGCCTACTCGTCAAAAGCCCGAAGCCCAGCTCTGCCAGCAGTGCACTGTGTGCTCTTAGGAAACAGAGAAGCAAAGAAGTTAGCAAGCTTGTTTTGGCAGAAGAAAAAACACAAAATACCCAACCACAGATCCTCAAAAATATTGCTAAGCACTAATTTTGCTAACATGTTAGACAGCCTTCGGATCTAGGCAATCTTGTTCCTCAGCTGGAAAGAGTTCCTGCCAGCCATGTGATTCCAAATCCACCCTGGACATATGGGGATAATGAGAAAATCAGCTCCGGCCTTCCCTGGCCTTCCAGCCAAGTGAATGGGGGCATCCCCTGGTGCTTCAGCCCGGGGCCCACCCAGAGGATGCTAGCTGGCCTGCAGAGGCCTCAACCATGCCCTCCTGGACTCAGGTAAGACTGAGGTTTCCGTGCCCTCAAAACAATTGTTCAGACAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCTTTGTTGGCACAGTCCCCTGATCATTCGAGGTCAGCATCTCCATCAAAATGGACCCAATGCTGAGGCAAGAAGGAGAACATCACTGTTAAGAAGGTAATGAGTCACAAATGCTATTTCGATGGTTTTCTTTGAAAGAAATACACAGAACCAAACCAATTTTAATTAAAGATCTTGTCTTTGTAATCAGGCAGCCACAAATGAAGGCAAAACTGCTTTCATGTGGCATAATATACACAGAGCTGAACTAGTTTTCCCATAAAAGGGCAGGTTCTTTTCTTCAAATAAGAAAAGAGTTTGTTCCTAACAATATGGGGGATGCAACAGAAAGCTGTCTTTTGCAAAGTATAAAATTGCAGATCCTCCCGTGGAAGCCATTTCTTGATGCTAAACCAATGCGAACGTTTGCCAAACGCACATGCGAGCCGGGATTATCCTACCCTTTGAGATTAGACATGTGATCCTGATTTTTAAGTGAAAAACGCAGCCAGAGGCCAAATAAACATACCTACAAGTACATCGAAAGCTCAAATGGTTGAGAAATGATTGTAACACACCCCGGTGTGTATTTCCGAGGAAGAATCAACATGCACATGGAAATTGATGTTTTGATTTTTAATTTTAAAACGACGACAGAACTGAAATACCTCCCCTAACTAGGTCCACTGAAACCAGTGAGGAGATAATCATTTTCAGTTAAATATGCATGTAATTTAATAATCCACAGATGGAAAATGCATTTGAGGTGGACTGAACACAGCCAGGAGTTTTTGCTTATCGACAGCACTGAATCCTGCCTTGACTAGAGAGACTCGTCATGTGATCAACTGTGGCCAGAGGGCATCCTGCAGACAGCTCCTGTCACACCACACTGACCAGACTCTTATGAGTATTTAAGCATCTTCAGGGAAGCGATTGACTGTCTTATAATGGTCTTACAAGTACGGAACTTTATTACCTGCTAATAATCAGAGCACATGATGGCACAATAGAATATACGAGTGAAGTTCTAAATGCAAGGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGATAAAGCTGGCAGGGGGCATTGGCGCCCTAATGCTGGGCACTAACCACCTGCCCGGACTGCGAATATCTGTTGGGTCCTTTCTATATCTGGTCTATTCTCGTGTTTGATTATATCCTGGTGGCAAGAATAGCAAAATCAACTCTCCTTCCTATCCCATGTGGAGAGGCATGATTTGAGTCAGAGAGCATTATCCTCTCTGCGTTACCCAACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACATCCTCATTGGTTGCAAGGATCAGTGTCCAATATCTACTGCCATGATCATTCTCAGTTTTACATCCACAGAGCTTCATAGAATTCTAACACCACAGGTCCAAGTAGAGGTTTTGGCCTCAGAGTGGGCTAGATTCCACCTCTGACAGCAGCTGTGGGACTGTTTTTCCATCTGTAAAATGGAGACAAGAGTATCACCTACCTCATGGTGTTGGTGGGATCGTTAAACAGAATTCTGATCATGAAACCCTTAGCCTGCTCCCTGCATAGGCTGCATGCGCTCAGTGAGCTATGGCTCTGTTTCATGCTGACTTTACCATCATGTAAGCAGTTTTAAAAATGCTAGAAGCTTTAGTCATAGAATTACCATATGATACAGCCTACTGCAGAGTCCAGAGGCTGAGGCAGGAGAGTTACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGCGCCTGCACTCCAGCCTGGGCAACAGAGTGAGATTCTGTCTCAACACAAAAAAGAAGACATGTGTCCCCATCACAGTATCATACAGAGTGCTTCCACTGCCCTAAAATACCCTGTGCTCTTCCTATTCATCCCTCTCTTCAACCCCAGCAACCACTGATCCTTTTACCATCTCCATGGTTTTGCCTTTCCCAGAATGTCATATTGTTGGAATCATACGCTATGTAGCCTTTGCAAATGGGCTTCTTTCACTGAGCAATGTGCATTGAAGGTGCCTCTATGTCTTTTCAAGGGTTGATAGCTCATTCCTTTTTATTGCTAAATAATATTCCATTGTCTGAATGTACCACATTTTGTTTATCCATTCACCTACTAAAGGACATCTTGGTTGCTTCCAAGTTTGGGCAATTATAAATAAAACTGCTATAAAC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG020218]]
+
[[Category:Intergenic]][[Category:NONHSAG020218]][[Category:Transcripts]]

Latest revision as of 03:12, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT144204

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3093 nt

Genomic location

chr16-:86508131..86542466

Exon number

4

Exons

86508131..86510805,86511492..86511657,86512311..86512362,86542261..86542466

Genome context

Sequence
000001 AGCAGACAGC GCGGGCTGGG AGCGCCGGCA AGGGCGGCCC TCGCGCACCT GGCTGCCAGC CCGCAGGGGG CTCGCACGCA 000080
000081 GACCTGCCCT TGCCACCTCA GCGCTCGGGT GCGGGCTGGG GGCGGTGGAG CCACGAAAGG TGGTGCCGAG AGCGGAGCGC 000160
000161 AGGACAGCGC AGGAGCCCCG GCGCATCGCG GCGCGCACAG ACCCAGGATT ACTTCATGCA CATAAAAGAA AACGCAACTA 000240
000241 CAGTGGACCC TGAACAACCT ATGGCCTGCA GCCACTGAAG AATGCTTGCA TAAGGAGCTC TTCTCTGCAC ATACCCCGAC 000320
000321 ACAGTGATGG TATCTTGCAG CTGCTGCTTC TGTCCAAGGC ACTGCAGCCT ACTCGTCAAA AGCCCGAAGC CCAGCTCTGC 000400
000401 CAGCAGTGCA CTGTGTGCTC TTAGGAAACA GAGAAGCAAA GAAGTTAGCA AGCTTGTTTT GGCAGAAGAA AAAACACAAA 000480
000481 ATACCCAACC ACAGATCCTC AAAAATATTG CTAAGCACTA ATTTTGCTAA CATGTTAGAC AGCCTTCGGA TCTAGGCAAT 000560
000561 CTTGTTCCTC AGCTGGAAAG AGTTCCTGCC AGCCATGTGA TTCCAAATCC ACCCTGGACA TATGGGGATA ATGAGAAAAT 000640
000641 CAGCTCCGGC CTTCCCTGGC CTTCCAGCCA AGTGAATGGG GGCATCCCCT GGTGCTTCAG CCCGGGGCCC ACCCAGAGGA 000720
000721 TGCTAGCTGG CCTGCAGAGG CCTCAACCAT GCCCTCCTGG ACTCAGGTAA GACTGAGGTT TCCGTGCCCT CAAAACAATT 000800
000801 GTTCAGACAA AAACTCACTG CCCAGGTCAA AGTCACAGCA CCAGAAAGCC AACCTGAGGA TGAAGACAAA GCTCTTTGTT 000880
000881 GGCACAGTCC CCTGATCATT CGAGGTCAGC ATCTCCATCA AAATGGACCC AATGCTGAGG CAAGAAGGAG AACATCACTG 000960
000961 TTAAGAAGGT AATGAGTCAC AAATGCTATT TCGATGGTTT TCTTTGAAAG AAATACACAG AACCAAACCA ATTTTAATTA 001040
001041 AAGATCTTGT CTTTGTAATC AGGCAGCCAC AAATGAAGGC AAAACTGCTT TCATGTGGCA TAATATACAC AGAGCTGAAC 001120
001121 TAGTTTTCCC ATAAAAGGGC AGGTTCTTTT CTTCAAATAA GAAAAGAGTT TGTTCCTAAC AATATGGGGG ATGCAACAGA 001200
001201 AAGCTGTCTT TTGCAAAGTA TAAAATTGCA GATCCTCCCG TGGAAGCCAT TTCTTGATGC TAAACCAATG CGAACGTTTG 001280
001281 CCAAACGCAC ATGCGAGCCG GGATTATCCT ACCCTTTGAG ATTAGACATG TGATCCTGAT TTTTAAGTGA AAAACGCAGC 001360
001361 CAGAGGCCAA ATAAACATAC CTACAAGTAC ATCGAAAGCT CAAATGGTTG AGAAATGATT GTAACACACC CCGGTGTGTA 001440
001441 TTTCCGAGGA AGAATCAACA TGCACATGGA AATTGATGTT TTGATTTTTA ATTTTAAAAC GACGACAGAA CTGAAATACC 001520
001521 TCCCCTAACT AGGTCCACTG AAACCAGTGA GGAGATAATC ATTTTCAGTT AAATATGCAT GTAATTTAAT AATCCACAGA 001600
001601 TGGAAAATGC ATTTGAGGTG GACTGAACAC AGCCAGGAGT TTTTGCTTAT CGACAGCACT GAATCCTGCC TTGACTAGAG 001680
001681 AGACTCGTCA TGTGATCAAC TGTGGCCAGA GGGCATCCTG CAGACAGCTC CTGTCACACC ACACTGACCA GACTCTTATG 001760
001761 AGTATTTAAG CATCTTCAGG GAAGCGATTG ACTGTCTTAT AATGGTCTTA CAAGTACGGA ACTTTATTAC CTGCTAATAA 001840
001841 TCAGAGCACA TGATGGCACA ATAGAATATA CGAGTGAAGT TCTAAATGCA AGGTTGTTCT TATTCTGTGA GTGGCAAAAC 001920
001921 TCATGCAGTG AGCAGATAAA GCTGGCAGGG GGCATTGGCG CCCTAATGCT GGGCACTAAC CACCTGCCCG GACTGCGAAT 002000
002001 ATCTGTTGGG TCCTTTCTAT ATCTGGTCTA TTCTCGTGTT TGATTATATC CTGGTGGCAA GAATAGCAAA ATCAACTCTC 002080
002081 CTTCCTATCC CATGTGGAGA GGCATGATTT GAGTCAGAGA GCATTATCCT CTCTGCGTTA CCCAACCCCA TGTCCCATGA 002160
002161 TGCACTTTGT AGACAAGCAA GTGTCCCTGG TGGAGAATCC ACAGCCACAC ATCCTCATTG GTTGCAAGGA TCAGTGTCCA 002240
002241 ATATCTACTG CCATGATCAT TCTCAGTTTT ACATCCACAG AGCTTCATAG AATTCTAACA CCACAGGTCC AAGTAGAGGT 002320
002321 TTTGGCCTCA GAGTGGGCTA GATTCCACCT CTGACAGCAG CTGTGGGACT GTTTTTCCAT CTGTAAAATG GAGACAAGAG 002400
002401 TATCACCTAC CTCATGGTGT TGGTGGGATC GTTAAACAGA ATTCTGATCA TGAAACCCTT AGCCTGCTCC CTGCATAGGC 002480
002481 TGCATGCGCT CAGTGAGCTA TGGCTCTGTT TCATGCTGAC TTTACCATCA TGTAAGCAGT TTTAAAAATG CTAGAAGCTT 002560
002561 TAGTCATAGA ATTACCATAT GATACAGCCT ACTGCAGAGT CCAGAGGCTG AGGCAGGAGA GTTACTTGAA CCTGGGAGGC 002640
002641 GGAGGTTGCA GTGAGCCAAG ATCGCGCCTG CACTCCAGCC TGGGCAACAG AGTGAGATTC TGTCTCAACA CAAAAAAGAA 002720
002721 GACATGTGTC CCCATCACAG TATCATACAG AGTGCTTCCA CTGCCCTAAA ATACCCTGTG CTCTTCCTAT TCATCCCTCT 002800
002801 CTTCAACCCC AGCAACCACT GATCCTTTTA CCATCTCCAT GGTTTTGCCT TTCCCAGAAT GTCATATTGT TGGAATCATA 002880
002881 CGCTATGTAG CCTTTGCAAA TGGGCTTCTT TCACTGAGCA ATGTGCATTG AAGGTGCCTC TATGTCTTTT CAAGGGTTGA 002960
002961 TAGCTCATTC CTTTTTATTG CTAAATAATA TTCCATTGTC TGAATGTACC ACATTTTGTT TATCCATTCA CCTACTAAAG 003040
003041 GACATCTTGG TTGCTTCCAA GTTTGGGCAA TTATAAATAA AACTGCTATA AAC
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