Difference between revisions of "ENST00000434762.2"
| Line 42: | Line 42: | ||
sequence = <dnaseq>GGGCGTCTGAGGCTGCTGTGCTGAGTGAGGGCTGCGGTGCAGGCCTGAGGATGGTCAGCGTGGAGGGCCGAGCCATGTCCTTCCAGAGTATCATCCACCTGTCCCTGGACAGCCCTGTCCATGCCGTTTGTGTGTTGGGCACAGAAATCTGCTTGGATCTCAGCGGGTGTGCCCCCCAGAAGTGCCAGTGCTTCACCATCCATGGCTCTGGGAGGGTCTTGATCGATGTGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGATGACATCGCCCAGCCCTTCCGTGGATGCGGATAAGGTCTCGGTCACATACTATGGGCCCAACGAGGATGCCCCCGTGGGCACAGCTGTGCTGTACCTCACTGGCATTGAGGTCTCTCTAGAGGTAGACATCTACCGCAATGGGCAAGTTGAGATGTCAAGTGACAAACAGGCTAAGAAAAAATGGATCTGGGGTCCCAGCGGTTGGGGTGCCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGTGATCTTTTCAGAGGAAATAACGAATCTGTCCCAGATGACTCTGAATGTCCAAGGCCCCAGCTGTATCTTAAAGAAATATCGGCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGAAGGCGAGAGTCTACTGGCCCCAAAAAGACAACTCCAGTACCTTTGAGTTGGTGCTGGGGCCCGACCAGCACGCCTATACCTTGGCCCTCCTCGGGAACCACTTGAAGGAGACTTTCTACGTTGAAGCTATAGCATTCCCATCTGCCGAATTCTCAGGCCTCATCTCCTACTCTGTGTCCCTGGTGGAGGAGTCTCAAGACCCGTCAATTCCAGAGACTGTGCTGTACAAAGACACGGTGGTGTTCCGGGTGGCTCCCTGTGTCTTCATTCCCTGTACCCAGGTGCCTCTGGAGGTTTACCTGTGCAGGGAGCTGCAGCTGCAGGGTTTTGTGGACACAGTGACGAAGCTGAGTGAGAAGAGCAACAGCCAGGGTGGCATCTGTCTATGAGGACCCCAACCGCCTGGGCAGGTGGCTCCAGGATGAGATGGCCTTCTGCTACACCCAGGCTCCCCACAAGACAACGTCCTTGATCCTCGACACACCTCAGGCCGCCGATCTCGATGAGTTCCCCATGAAGTACTCACTGAGCCCTGGTATTGGCTACATGATCCAGGACACTGAGGACCATAAAGTGGCCAGCATGGATTCCATTGGGAACCTGATGGTGTCCCCACCTGTCAAGGTCCAAGGGAAAGAGTACCCGCTGGGCAGAGTCCTCATTGGCAGCAGCTTTTACCCCAGCGCAGAGGGCCGGGCCATGAGTAAGACCCTCCGAGACTTCCTCTATGCCCAGCAGGTCCAAGCGCCGGTGGAGCTCTACTCAGATTGGCTAATGACTGGCCACGTGGATGAGTTCATGTGCTTCATCCCCACAGATGACAAGAATGAGGGCAAAAAGGGCTTCCTGCTGCTCCTGGCCAGCCCCAGTGCCTGCTATAAACTGTTCCGAGAGAAACAGAAGGAAGGCTATGGCGACGCTCTTCTGTTTGATGAGCTTAGAGCAGATCAGCTCCTGTCTAATGGAAGGGAAGCCAAAACCATCGACCAACTTCTGGCTGATGAAAGCCTGAAGAAGCAGAATGAATACGTGGAGAAGTGCATTCACCTGAACCGTGACATCCTGAAGACGGAGCTGGGCCTGGTGGAACAGGACATCATCGAGATTCCCCAGCTGTTCTGCTTGGAGAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTTGCGGATGATTGTGATGGGCAAGAACCTGGGGATCCCCAAGCCTTTTGGGCCCCAAATCAAGGGGACCTGCTGCCTGGAAGAAAAGATTTGCTGCTTGCTGGAGCCCCTGGGCTTCAAGTGCACCTTCATCAATGACTTTGACTGTTACCTGACAGAGGTCGGAGACATCTGTGCCTGTGCCAACATCCGCCGGGTGCCCTTTGCCTTCAAATGGTGGAAGATGGTACCTTAGACCCAGGCCCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATGC</dnaseq>| | sequence = <dnaseq>GGGCGTCTGAGGCTGCTGTGCTGAGTGAGGGCTGCGGTGCAGGCCTGAGGATGGTCAGCGTGGAGGGCCGAGCCATGTCCTTCCAGAGTATCATCCACCTGTCCCTGGACAGCCCTGTCCATGCCGTTTGTGTGTTGGGCACAGAAATCTGCTTGGATCTCAGCGGGTGTGCCCCCCAGAAGTGCCAGTGCTTCACCATCCATGGCTCTGGGAGGGTCTTGATCGATGTGGCCAACACGGTGATTTCTGAGAAGGAGGACGCCACCATCTGGTGGCCCCTGTCTGATCCCACGTACGCCACAGTGAAGATGACATCGCCCAGCCCTTCCGTGGATGCGGATAAGGTCTCGGTCACATACTATGGGCCCAACGAGGATGCCCCCGTGGGCACAGCTGTGCTGTACCTCACTGGCATTGAGGTCTCTCTAGAGGTAGACATCTACCGCAATGGGCAAGTTGAGATGTCAAGTGACAAACAGGCTAAGAAAAAATGGATCTGGGGTCCCAGCGGTTGGGGTGCCATCCTGCTTGTGAATTGCAACCCTGCTGATGTGGGCCAGCAACTTGAGGACAAGAAAACCAAGAAAGTGATCTTTTCAGAGGAAATAACGAATCTGTCCCAGATGACTCTGAATGTCCAAGGCCCCAGCTGTATCTTAAAGAAATATCGGCTAGTCCTCCATACCTCCAAGGAAGAGTCGAAGAAGGCGAGAGTCTACTGGCCCCAAAAAGACAACTCCAGTACCTTTGAGTTGGTGCTGGGGCCCGACCAGCACGCCTATACCTTGGCCCTCCTCGGGAACCACTTGAAGGAGACTTTCTACGTTGAAGCTATAGCATTCCCATCTGCCGAATTCTCAGGCCTCATCTCCTACTCTGTGTCCCTGGTGGAGGAGTCTCAAGACCCGTCAATTCCAGAGACTGTGCTGTACAAAGACACGGTGGTGTTCCGGGTGGCTCCCTGTGTCTTCATTCCCTGTACCCAGGTGCCTCTGGAGGTTTACCTGTGCAGGGAGCTGCAGCTGCAGGGTTTTGTGGACACAGTGACGAAGCTGAGTGAGAAGAGCAACAGCCAGGGTGGCATCTGTCTATGAGGACCCCAACCGCCTGGGCAGGTGGCTCCAGGATGAGATGGCCTTCTGCTACACCCAGGCTCCCCACAAGACAACGTCCTTGATCCTCGACACACCTCAGGCCGCCGATCTCGATGAGTTCCCCATGAAGTACTCACTGAGCCCTGGTATTGGCTACATGATCCAGGACACTGAGGACCATAAAGTGGCCAGCATGGATTCCATTGGGAACCTGATGGTGTCCCCACCTGTCAAGGTCCAAGGGAAAGAGTACCCGCTGGGCAGAGTCCTCATTGGCAGCAGCTTTTACCCCAGCGCAGAGGGCCGGGCCATGAGTAAGACCCTCCGAGACTTCCTCTATGCCCAGCAGGTCCAAGCGCCGGTGGAGCTCTACTCAGATTGGCTAATGACTGGCCACGTGGATGAGTTCATGTGCTTCATCCCCACAGATGACAAGAATGAGGGCAAAAAGGGCTTCCTGCTGCTCCTGGCCAGCCCCAGTGCCTGCTATAAACTGTTCCGAGAGAAACAGAAGGAAGGCTATGGCGACGCTCTTCTGTTTGATGAGCTTAGAGCAGATCAGCTCCTGTCTAATGGAAGGGAAGCCAAAACCATCGACCAACTTCTGGCTGATGAAAGCCTGAAGAAGCAGAATGAATACGTGGAGAAGTGCATTCACCTGAACCGTGACATCCTGAAGACGGAGCTGGGCCTGGTGGAACAGGACATCATCGAGATTCCCCAGCTGTTCTGCTTGGAGAAGCTGACTAACATCCCCTCTGACCAGCAGCCCAAGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTTGCGGATGATTGTGATGGGCAAGAACCTGGGGATCCCCAAGCCTTTTGGGCCCCAAATCAAGGGGACCTGCTGCCTGGAAGAAAAGATTTGCTGCTTGCTGGAGCCCCTGGGCTTCAAGTGCACCTTCATCAATGACTTTGACTGTTACCTGACAGAGGTCGGAGACATCTGTGCCTGTGCCAACATCCGCCGGGTGCCCTTTGCCTTCAAATGGTGGAAGATGGTACCTTAGACCCAGGCCCTGGAGCTGCCAGCTCTGCCCCAGCGTGGATGGCCCACTGTCACCATGCAACAGCATGATTCTTTGCCCAGTAGAGGAGGCTGGAGAGTCCAGGCAACAGAACCCTTTCTTCCCTGTCTGCCCCGACCGACCCTCGGACCCAGTAGGATGGCAAATGCCGCCAGCTTGAACCCCTATGGGGAAAAGATGCAAAAGTGTTCAGCCAAGTGACGTTTACTAAATAGCCAATAAAGGGCTGGTGGGTGTGAATGC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:ENSG00000256049.2]] | + | [[Category:Sense]][[Category:ENSG00000256049.2]][[Category:lnc-PADI4-1]] |
Revision as of 08:17, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
ENST00000434762.2 |
| Source |
Gencode19 |
| Same with |
lnc-PADI4-1:2 |
| Classification |
sense |
| Length |
2397 nt |
| Genomic location |
chr1+:17698691..17728195 |
| Exon number |
16 |
| Exons |
17698691..17698856,17699551..17699728,17701922..17701994,17706415..17706482,17707542..17707659,17708462..17708587,17714876..17715054,17715272..17715375,17718609..17718721,17720471..17720578,17720796..17720950,17721447..17721603,17722036..17722159,17723567..17723637,17725182..17725343,17727701..17728195 |
| Genome context |
|
| Sequence |
000001 GGGCGTCTGA GGCTGCTGTG CTGAGTGAGG GCTGCGGTGC AGGCCTGAGG ATGGTCAGCG TGGAGGGCCG AGCCATGTCC 000080
000081 TTCCAGAGTA TCATCCACCT GTCCCTGGAC AGCCCTGTCC ATGCCGTTTG TGTGTTGGGC ACAGAAATCT GCTTGGATCT 000160 000161 CAGCGGGTGT GCCCCCCAGA AGTGCCAGTG CTTCACCATC CATGGCTCTG GGAGGGTCTT GATCGATGTG GCCAACACGG 000240 000241 TGATTTCTGA GAAGGAGGAC GCCACCATCT GGTGGCCCCT GTCTGATCCC ACGTACGCCA CAGTGAAGAT GACATCGCCC 000320 000321 AGCCCTTCCG TGGATGCGGA TAAGGTCTCG GTCACATACT ATGGGCCCAA CGAGGATGCC CCCGTGGGCA CAGCTGTGCT 000400 000401 GTACCTCACT GGCATTGAGG TCTCTCTAGA GGTAGACATC TACCGCAATG GGCAAGTTGA GATGTCAAGT GACAAACAGG 000480 000481 CTAAGAAAAA ATGGATCTGG GGTCCCAGCG GTTGGGGTGC CATCCTGCTT GTGAATTGCA ACCCTGCTGA TGTGGGCCAG 000560 000561 CAACTTGAGG ACAAGAAAAC CAAGAAAGTG ATCTTTTCAG AGGAAATAAC GAATCTGTCC CAGATGACTC TGAATGTCCA 000640 000641 AGGCCCCAGC TGTATCTTAA AGAAATATCG GCTAGTCCTC CATACCTCCA AGGAAGAGTC GAAGAAGGCG AGAGTCTACT 000720 000721 GGCCCCAAAA AGACAACTCC AGTACCTTTG AGTTGGTGCT GGGGCCCGAC CAGCACGCCT ATACCTTGGC CCTCCTCGGG 000800 000801 AACCACTTGA AGGAGACTTT CTACGTTGAA GCTATAGCAT TCCCATCTGC CGAATTCTCA GGCCTCATCT CCTACTCTGT 000880 000881 GTCCCTGGTG GAGGAGTCTC AAGACCCGTC AATTCCAGAG ACTGTGCTGT ACAAAGACAC GGTGGTGTTC CGGGTGGCTC 000960 000961 CCTGTGTCTT CATTCCCTGT ACCCAGGTGC CTCTGGAGGT TTACCTGTGC AGGGAGCTGC AGCTGCAGGG TTTTGTGGAC 001040 001041 ACAGTGACGA AGCTGAGTGA GAAGAGCAAC AGCCAGGGTG GCATCTGTCT ATGAGGACCC CAACCGCCTG GGCAGGTGGC 001120 001121 TCCAGGATGA GATGGCCTTC TGCTACACCC AGGCTCCCCA CAAGACAACG TCCTTGATCC TCGACACACC TCAGGCCGCC 001200 001201 GATCTCGATG AGTTCCCCAT GAAGTACTCA CTGAGCCCTG GTATTGGCTA CATGATCCAG GACACTGAGG ACCATAAAGT 001280 001281 GGCCAGCATG GATTCCATTG GGAACCTGAT GGTGTCCCCA CCTGTCAAGG TCCAAGGGAA AGAGTACCCG CTGGGCAGAG 001360 001361 TCCTCATTGG CAGCAGCTTT TACCCCAGCG CAGAGGGCCG GGCCATGAGT AAGACCCTCC GAGACTTCCT CTATGCCCAG 001440 001441 CAGGTCCAAG CGCCGGTGGA GCTCTACTCA GATTGGCTAA TGACTGGCCA CGTGGATGAG TTCATGTGCT TCATCCCCAC 001520 001521 AGATGACAAG AATGAGGGCA AAAAGGGCTT CCTGCTGCTC CTGGCCAGCC CCAGTGCCTG CTATAAACTG TTCCGAGAGA 001600 001601 AACAGAAGGA AGGCTATGGC GACGCTCTTC TGTTTGATGA GCTTAGAGCA GATCAGCTCC TGTCTAATGG AAGGGAAGCC 001680 001681 AAAACCATCG ACCAACTTCT GGCTGATGAA AGCCTGAAGA AGCAGAATGA ATACGTGGAG AAGTGCATTC ACCTGAACCG 001760 001761 TGACATCCTG AAGACGGAGC TGGGCCTGGT GGAACAGGAC ATCATCGAGA TTCCCCAGCT GTTCTGCTTG GAGAAGCTGA 001840 001841 CTAACATCCC CTCTGACCAG CAGCCCAAGA GGTCCTTTGC GAGGCCATAC TTCCCTGACC TGTTGCGGAT GATTGTGATG 001920 001921 GGCAAGAACC TGGGGATCCC CAAGCCTTTT GGGCCCCAAA TCAAGGGGAC CTGCTGCCTG GAAGAAAAGA TTTGCTGCTT 002000 002001 GCTGGAGCCC CTGGGCTTCA AGTGCACCTT CATCAATGAC TTTGACTGTT ACCTGACAGA GGTCGGAGAC ATCTGTGCCT 002080 002081 GTGCCAACAT CCGCCGGGTG CCCTTTGCCT TCAAATGGTG GAAGATGGTA CCTTAGACCC AGGCCCTGGA GCTGCCAGCT 002160 002161 CTGCCCCAGC GTGGATGGCC CACTGTCACC ATGCAACAGC ATGATTCTTT GCCCAGTAGA GGAGGCTGGA GAGTCCAGGC 002240 002241 AACAGAACCC TTTCTTCCCT GTCTGCCCCG ACCGACCCTC GGACCCAGTA GGATGGCAAA TGCCGCCAGC TTGAACCCCT 002320 002321 ATGGGGAAAA GATGCAAAAG TGTTCAGCCA AGTGACGTTT ACTAAATAGC CAATAAAGGG CTGGTGGGTG TGAATGC |
