Difference between revisions of "ENST00000421202.1"

Revision as of 10:23, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID	ENST00000421202.1
Source	Gencode19
Same with	lnc-TMED5-1:6
Classification	intergenic
Length	2973 nt
Genomic location	chr1-:93776726..93811368
Exon number	9
Exons	93776726..93777165,93790192..93790286,93791326..93791452,93792159..93792219,93802934..93804831,93804914..93805093,93805206..93805236,93806015..93806067,93811281..93811368
Genome context
Sequence	000001 CCGCCCGTTC GCGCTGCCAG CAGCTTCCGC CTGCTACGGT CCTGGCAAGC ACCTCGGGAT CCCATTCCTT CACAGGGACC 000080 000081 CTAGCCAGTT AAAGCTGATA CATTCCTGTG GGTCAACTAT GCAACTAACT CAGATTTTGA GCAAACAAAG CTCTCAAGTT 000160 000161 GGTGATCCTC AGGAGTCTCT GCATTAGTTG GACAGCTCTT CTGGAATTAT CTTCTAAGTC AACTGTGGGT TGGGTAGGTG 000240 000241 GCTCTGCTGA TTTTTCGCTG GACTTCCACA TTTGGGACGA GTTGGCTGTC ATCAGCTCTA GAAAGGGTGT GGCCGTTTTA 000320 000321 CATTGGCTGT TTTCCTCACA TTCCTCAAGC AGGTACTGTA ATAAAGAACT GGAGAAATAC AGTCAGATGG GAAGTAGCCC 000400 000401 TTGCTGTCAA GGAGCTTGCC ATCTAATGGG GGAGACAGGC AAGTAAACCA AAGACTACAC AGTGCAGTAT GGTAAGTGCC 000480 000481 ATGATTTTGA TGTGACAGGG CACAGTGGAC GACCTTCCAA ATCAAAGCAA GTAACTAGGG GTTGACAATG GTAAGTATCA 000560 000561 TAGTTGAAGT ATCCTTGAAC AAGGTTTCAG GAAGAAGAAG AAGGGAATTT CATGCAGGGA AACAGCCAAA GCTCAGTGAG 000640 000641 TCAAAATATC ACAGCATTCT TGGTAAGCCC AATTGTTTTT TCTGTTTTGC TATTTTGGTG GAGAGAAAGG AACACATAAA 000720 000721 GGAATAACAT GAGAGAAGGC TATTTGGGGA AGTGTAGTAG TTAAGGTTCT GGCTCAAACA ACAACTGCAG CTCATAAAGT 000800 000801 TGACTTTAGT GGAAGGATAC TGGGGTATCT CATGGAATCT TGGGAACTGT TGAATAACCA GGGAAACTCT GGGAAACTCA 000880 000881 CTGGTAGGAA TCCATAAACT GTCCTCCTGG TGGGCTGTAA ACAACTCACC CTCTATGCAT CTCACATCAA AATTCCAGTT 000960 000961 TCTTGGGAAA ACAAGTCTGT TTGCCCAATT TGGGTCATAT TTCCACGTCC ATGTTACTCA GGCATGATTC ATCTGCAAGT 001040 001041 TATGTGTATA GATATTTTGC TACTGTTCCA CCCTTACGCT GTGCTGGGGA GGGAGGTGTC ACTGTGAGCT GTGTCGGTGC 001120 001121 CTTAAGAGAT ATCTGTTGTG TCTTATTACT TGGTTGCTTT TCCCCACATG TACAATGACA AAAATGCCTT CAACCTATTT 001200 001201 GATCCAGCCG TTCCAGTACA ACTCCTATAC TTGCCATCTT TCCAAGCCCA AAGGTACATC CAGCTGATGG AAGGAGCATC 001280 001281 TTGGTGTTAA TATTCTTTTA GTCATGGTCT CTGAAAGTAA AATGTCTATT CTTCTAATTC TGGCACAATC TTATCTAGCT 001360 001361 ATAGTTCCTC ATGGTCCTGC ACTCCATGGA CTAAATTGTA AGTATAATTA CTACCAATGT ACTCTATAAA TAACTTTTGG 001440 001441 GGCCAGGGTG GCAATAGTTG CTAGAGAGAA AAAAAAAAAA AAGGAAGGAG AAGAAAACAG TGATAGTTCT TATTTTAAAA 001520 001521 GGAAAAAAAG AGGCAGGAGG CTCTCTTGAG GCCAGGAGTT TAAGACCAGC CTAGGCAGCA TTTCAAGACC CTGTCTCTAC 001600 001601 TAAAAAGTAA AAAAAAAATT TAGTCAGGCA TGGTGGCATG CACCTGTAGT CGTAGCTACT CAGGAGACTG AGGTGGGAGG 001680 001681 ATTGATTGAG CTCAGGAGTT TGAGGCTGCA GTGAGCAATC ATCATGCCAT TGCACTCCAG CCTGGGCATC AGAGCAAGAC 001760 001761 CTTGTCTTTT AGGAAAAAAA GGCAGGGAAG AGGAATAGGT AATTTTTCAG TGTTCAGACA TTCCAGCAAT ATGTGTGGAG 001840 001841 TACTCATTCT CACTACAGTT TATGAGGCCA TAGCTAGTAT GTATGACTAC CCATCCAAGT TTCCCTGCTT ACAGTTACTA 001920 001921 TTCCAACTGA TTGGGGGGCT TTTC

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CCGCCCGTTCGCGCTGCCAGCAGCTTCCGCCTGCTACGGTCCTGGCAAGCACCTCGGGATCCCATTCCTTCACAGGGACCCTAGCCAGTTAAAGCTGATACATTCCTGTGGGTCAACTATGCAACTAACTCAGATTTTGAGCAAACAAAGCTCTCAAGTTGGTGATCCTCAGGAGTCTCTGCATTAGTTGGACAGCTCTTCTGGAATTATCTTCTAAGTCAACTGTGGGTTGGGTAGGTGGCTCTGCTGATTTTTCGCTGGACTTCCACATTTGGGACGAGTTGGCTGTCATCAGCTCTAGAAAGGGTGTGGCCGTTTTACATTGGCTGTTTTCCTCACATTCCTCAAGCAGGTACTGTAATAAAGAACTGGAGAAATACAGTCAGATGGGAAGTAGCCCTTGCTGTCAAGGAGCTTGCCATCTAATGGGGGAGACAGGCAAGTAAACCAAAGACTACACAGTGCAGTATGGTAAGTGCCATGATTTTGATGTGACAGGGCACAGTGGACGACCTTCCAAATCAAAGCAAGTAACTAGGGGTTGACAATGGTAAGTATCATAGTTGAAGTATCCTTGAACAAGGTTTCAGGAAGAAGAAGAAGGGAATTTCATGCAGGGAAACAGCCAAAGCTCAGTGAGTCAAAATATCACAGCATTCTTGGTAAGCCCAATTGTTTTTTCTGTTTTGCTATTTTGGTGGAGAGAAAGGAACACATAAAGGAATAACATGAGAGAAGGCTATTTGGGGAAGTGTAGTAGTTAAGGTTCTGGCTCAAACAACAACTGCAGCTCATAAAGTTGACTTTAGTGGAAGGATACTGGGGTATCTCATGGAATCTTGGGAACTGTTGAATAACCAGGGAAACTCTGGGAAACTCACTGGTAGGAATCCATAAACTGTCCTCCTGGTGGGCTGTAAACAACTCACCCTCTATGCATCTCACATCAAAATTCCAGTTTCTTGGGAAAACAAGTCTGTTTGCCCAATTTGGGTCATATTTCCACGTCCATGTTACTCAGGCATGATTCATCTGCAAGTTATGTGTATAGATATTTTGCTACTGTTCCACCCTTACGCTGTGCTGGGGAGGGAGGTGTCACTGTGAGCTGTGTCGGTGCCTTAAGAGATATCTGTTGTGTCTTATTACTTGGTTGCTTTTCCCCACATGTACAATGACAAAAATGCCTTCAACCTATTTGATCCAGCCGTTCCAGTACAACTCCTATACTTGCCATCTTTCCAAGCCCAAAGGTACATCCAGCTGATGGAAGGAGCATCTTGGTGTTAATATTCTTTTAGTCATGGTCTCTGAAAGTAAAATGTCTATTCTTCTAATTCTGGCACAATCTTATCTAGCTATAGTTCCTCATGGTCCTGCACTCCATGGACTAAATTGTAAGTATAATTACTACCAATGTACTCTATAAATAACTTTTGGGGCCAGGGTGGCAATAGTTGCTAGAGAGAAAAAAAAAAAAAAGGAAGGAGAAGAAAACAGTGATAGTTCTTATTTTAAAAGGAAAAAAAGAGGCAGGAGGCTCTCTTGAGGCCAGGAGTTTAAGACCAGCCTAGGCAGCATTTCAAGACCCTGTCTCTACTAAAAAGTAAAAAAAAAATTTAGTCAGGCATGGTGGCATGCACCTGTAGTCGTAGCTACTCAGGAGACTGAGGTGGGAGGATTGATTGAGCTCAGGAGTTTGAGGCTGCAGTGAGCAATCATCATGCCATTGCACTCCAGCCTGGGCATCAGAGCAAGACCTTGTCTTTTAGGAAAAAAAGGCAGGGAAGAGGAATAGGTAATTTTTCAGTGTTCAGACATTCCAGCAATATGTGTGGAGTACTCATTCTCACTACAGTTTATGAGGCCATAGCTAGTATGTATGACTACCCATCCAAGTTTCCCTGCTTACAGTTACTATTCCAACTGATTGGGGGGCTTTTCCTAATAGAGTGATTTAAGCCTTCATTTTTAGACATCTAAGCCCTTGGTGATCATCAGCATAAAATGTGACAAATTAAACAAAAGCAAGACAGCACATCAGAGAACAACTCTGAGGTGGAATGATTGGGAACCAATGAATAGTTGTTCAGTAAATGGTTTATATTTTACAGATGATGAAACTGAAACACAAAAAATTTAGATTAACTCTTAGGTGACAAAGCCAGGATTGAAGCTCATGCGGTCTGGCTCCAGAACAACTCTTCTTCATAGTTACGTTATACTGCCCCTGCATTGTTGGTATTGAAAAATTTCCTTTCATCTCTGGTAAAAGTCAGCTCTCTAACTACTGCATCTCACAGCTGAACAGATAACTGATACCGTGCTTCCAGAAGATTTTTCTAACAGTGTTTGCAAGCTATAAAATAGTGCTTTCACTTAGAAAAGGCTAGACGTGGTGGTTCATGCCTGTAATCCCAGCACTTTGAGAGGCCGAGGCACCATGCTGGGAGATAAGGATCCAACATAAGACAAACAGTGCTGATGCTTTTGGAAAGCTCATATTCAAGCTGGGGAGACAAACAACATACAAGTGGCTGTAGCTACCTTCTGCATATGGATATCCAGTTTTCCCAGCACCACTTATTAAAGAGACTGTCTTTTCTGCAGTGTATATTCTTGGCACCGTTGTTGAAAATGAATTCATTGTAGGTGTGTGGGTTTGTTTCTGGGTTCTCTATTCTGTTCAACTTGTCTATGTGTCTGTTTTTATGCCAGTACCGTGTCATTTTAGTTACCAGAGCTCTGCAGTATAATTTGAAACCAGGTCATGTGATTCCTCCAGTTTTGTGGTATTAGGATAGGTTTGGCTATTCTGAGTCTTTTGTGGTTCCATATAAATTTTAGAATTTTTTTTTTCTATTTCTGTGAAGAATGTCATTGGTATTTTGATAGGGATTGCGTTGAATCTGTAGATTGCTTTGGGTAGTATGGACATTTTAACAATATTCATTCTTCTAATCCATGAACATG</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:ENSG00000223745.3]][[Category:lnc-TMED5-1]]
+[[Category:Intergenic]][[Category:ENSG00000223745.3]][[Category:lnc-TMED5-1]][[Category:Transcripts]]