Difference between revisions of "NONHSAT082919"
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sequence = <dnaseq>ATTGGCGTGTCTGCATGGCGTCGTCCACCACTGGGCCTTTGCACATGGGGACCTTTTTCAGCATCATGGGGCGTCGGTATAAAAGGAGGCGCAAGAAGCGCTCTGAGAGGAAAGCAGAAACAGTCTCCGCCAGTCAAGAAACCCTCAAAAGTATTTTGCCATGGATATAGAAGATGAAGAAAACATGATTCCAGCAGCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTG</dnaseq>| | sequence = <dnaseq>ATTGGCGTGTCTGCATGGCGTCGTCCACCACTGGGCCTTTGCACATGGGGACCTTTTTCAGCATCATGGGGCGTCGGTATAAAAGGAGGCGCAAGAAGCGCTCTGAGAGGAAAGCAGAAACAGTCTCCGCCAGTCAAGAAACCCTCAAAAGTATTTTGCCATGGATATAGAAGATGAAGAAAACATGATTCCAGCAGCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG033067]] | + | [[Category:Sense]][[Category:NONHSAG033067]][[Category:Transcripts]] |
Latest revision as of 00:11, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT082919 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
234 nt |
| Genomic location |
chr21+:46572510..46595691 |
| Exon number |
3 |
| Exons |
46572510..46572623,46591526..46591599,46595646..46595691 |
| Genome context |
|
| Sequence |
000001 ATTGGCGTGT CTGCATGGCG TCGTCCACCA CTGGGCCTTT GCACATGGGG ACCTTTTTCA GCATCATGGG GCGTCGGTAT 000080
000081 AAAAGGAGGC GCAAGAAGCG CTCTGAGAGG AAAGCAGAAA CAGTCTCCGC CAGTCAAGAA ACCCTCAAAA GTATTTTGCC 000160 000161 ATGGATATAG AAGATGAAGA AAACATGATT CCAGCAGCAC TGATGTGAAG GAAAACCGCA ATCTGGACAA CGTG |
Predicted Small Protein
| Name | NONHSAT082919_smProtein_14:169 |
| Length | 52 |
| Molecular weight | 5913.8611 |
| Aromaticity | 0.078431372549 |
| Instability index | 85.3588235294 |
| Isoelectric point | 11.6419067383 |
| Runs | 10 |
| Runs residual | 0.0418365365948 |
| Runs probability | 0.0341017488077 |
| Amino acid sequence | MASSTTGPLHMGTFFSIMGRRYKRRRKKRSERKAETVSASQETLKSILPWI |
| Secondary structure | LLLLLLLLLLLLHHHLLLLLLHHHHHHLLHHHHHEEELLLHHHHHHHHLLL |
| PRMN | - |
| PiMo | - |
