Difference between revisions of "ENST00000244820.2"
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sequence = <dnaseq>GCCTTGGCTGGCCATGTGCACCTCATTCCATGCCATTCCAACAGTTGCTGTGCTCCCAGGCTTATATAAGAAGAACCAGTTTTCCCACTTCATGATTTTGCAGCTTAATGGGATGGATATGGAAGAGAATAACTTAGCTTCTAGACAGGCACAATCGCAGACGTACACAGAGGCTGGAAGACGGTGCACACCATTGAGATACGTGTCTCATCCAGCCCGCCACATGCAGCCGGAACCAGGCCACCGCCTGGGTGTCCCTTGTGTCCTGTCCTCCTACCTCTTCTCTCTGGTCCCCACATTCCTTCCAGAGTTTCTCATACATGGATTGCTCCCAGGCTCCCTTCCATTGGGGGCCAGAGGTTCTCACAGAGCACAGAGAAGGGGACCATTCGCCCCTGGGACCATCAGGGGAATGATCTAGAAGTCAAGCAAATGTTCTAGCCCTTCAGGGTCTTCAAGGGAGATTACGGGGGAAGAAGGCTGAGGTAGAGAGCAGGGCCTCTATACATTTAAGCTCATAGAGATACAGAGCATATGAAGATATGGGAATTCAGAAGAGTTCCGTCCAACAGAAATGTAATATTGTAAAGTAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACTTGAATATGATACCAACAAACAGGAAGTGTCAGGAAGACGCCTTGCAGAACTGTCAGCCTGTGGAGTTGTTTCCCCAAGAGAGTTTGGAGTTAGAAAGAGATTGTCCTCTTCCTGTCACATGTGACACTGGGACTACTCACTCTCATCAAGAGAAACATGACACTTCTCACAGGGGTGTAGACTAGCCCCCCACGATAATCATGCAATAGCCCTAACATCAATTCATGCACTGGGATGTTCGTGAATTAATATTAAATAATATTACAGAATGGACAGCAAGGGAATTCAATTCCTTCTTATATCACCCTGAGAGTGGAGCCTACAAATCCTCCTGAGTCTTTGAGGTTCTCTATTCCTGTTATCCTTGAACAAGAAAATGTGCACATGTACACACACACACACACACACACACACACACCACTAATTTCCCTGAAAACACAAGAATGAGCAATAATAGATATGCACAGACAAAATGAAGTGATGGGGATTTTATTTACCTTCTACCCTGAAACAATCAAAACACAGACAAAATATGTGATATAATGTTTTCAAGTCACTGGACATCAAACAATGAAGGGCAGTGAACCCTCTGAGATAGCAAATGAACAATAATGAGGCCTCCAATTGCTCAGTCTGTCTTCCTTGATAGTGTTTCCAGGCTCCTGTTCAGAGAAGGGGGAACCCAGGCAGAGCTCAGTGGAGTCCCTGAGTTGGAGAGACACAACTGAGAGTATAGAGAAATCCCAGAGGCAGGAGCTCACAGGACAGAATTCCAGCAAGGAGAGTACTGCACAGGAAGAATGACCAGGAGGCATACAGAGGGTGCAGAGGGTCACCACTGAGGGTTCCAGTGAGTACTTATGATCACATGAAAACCTCCCAAGTTTGGGGAAGGAACTACTCAAAAAGACTGGAAGTAACTGGAGCTGACCAAGGCCTGAGAACAGTGCCTGTTTCTATTAGCCAGACTGAAGAACTTCATGATTCACAGGACATTTGGTTTGAATACACAGAGAGCCTTCCCTTAATCAGTGGGGAATAAGTAGAAATAGACTCAGCATTGTTATGGTCCTACCTAGAAAATCTTAAAAGCCAGACTCAAAAGGATCAATCTATTTCCAGTAACTTAATTGCATCCCAGAATAAAGCTCAATAATATTGAAAGGACTACAGCAACTTTCAGCACCCAACACCAGGCATTCAGGGAAGCAGAAGAATATAACCCTCAATGGAGAGATCCAATAAGCACAGAGAACCTTAAGTATAGGAAGATGTGAAGAAAATTACACGAAAGCACATACTAACCAAATTGGCTAAAACCAATGACTAAGAGAACATCTTAAAAGCAGTCATACAAAAAAGACAAAAGGAAAAGACAGACAAAATAAAGAGGAGGGAAGATAAGGGTGACAGCAGATTTCTCAGAAGAAACAATGCAAGTGAGAAGCCATTGGAGCTGCATTTTAAAAGTACTGAAAGAAAAAAATTGCCAATCTTGAATTCTGTTCCCAGTGAAAATATTTTTCAAAAACAAAGATGAATAAAGACTTTTTTCAGATTGGAAAAGCAATTCCATCAAGTGAATATATTATAATTTTTCTATT</dnaseq>| | sequence = <dnaseq>GCCTTGGCTGGCCATGTGCACCTCATTCCATGCCATTCCAACAGTTGCTGTGCTCCCAGGCTTATATAAGAAGAACCAGTTTTCCCACTTCATGATTTTGCAGCTTAATGGGATGGATATGGAAGAGAATAACTTAGCTTCTAGACAGGCACAATCGCAGACGTACACAGAGGCTGGAAGACGGTGCACACCATTGAGATACGTGTCTCATCCAGCCCGCCACATGCAGCCGGAACCAGGCCACCGCCTGGGTGTCCCTTGTGTCCTGTCCTCCTACCTCTTCTCTCTGGTCCCCACATTCCTTCCAGAGTTTCTCATACATGGATTGCTCCCAGGCTCCCTTCCATTGGGGGCCAGAGGTTCTCACAGAGCACAGAGAAGGGGACCATTCGCCCCTGGGACCATCAGGGGAATGATCTAGAAGTCAAGCAAATGTTCTAGCCCTTCAGGGTCTTCAAGGGAGATTACGGGGGAAGAAGGCTGAGGTAGAGAGCAGGGCCTCTATACATTTAAGCTCATAGAGATACAGAGCATATGAAGATATGGGAATTCAGAAGAGTTCCGTCCAACAGAAATGTAATATTGTAAAGTAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACTTGAATATGATACCAACAAACAGGAAGTGTCAGGAAGACGCCTTGCAGAACTGTCAGCCTGTGGAGTTGTTTCCCCAAGAGAGTTTGGAGTTAGAAAGAGATTGTCCTCTTCCTGTCACATGTGACACTGGGACTACTCACTCTCATCAAGAGAAACATGACACTTCTCACAGGGGTGTAGACTAGCCCCCCACGATAATCATGCAATAGCCCTAACATCAATTCATGCACTGGGATGTTCGTGAATTAATATTAAATAATATTACAGAATGGACAGCAAGGGAATTCAATTCCTTCTTATATCACCCTGAGAGTGGAGCCTACAAATCCTCCTGAGTCTTTGAGGTTCTCTATTCCTGTTATCCTTGAACAAGAAAATGTGCACATGTACACACACACACACACACACACACACACACCACTAATTTCCCTGAAAACACAAGAATGAGCAATAATAGATATGCACAGACAAAATGAAGTGATGGGGATTTTATTTACCTTCTACCCTGAAACAATCAAAACACAGACAAAATATGTGATATAATGTTTTCAAGTCACTGGACATCAAACAATGAAGGGCAGTGAACCCTCTGAGATAGCAAATGAACAATAATGAGGCCTCCAATTGCTCAGTCTGTCTTCCTTGATAGTGTTTCCAGGCTCCTGTTCAGAGAAGGGGGAACCCAGGCAGAGCTCAGTGGAGTCCCTGAGTTGGAGAGACACAACTGAGAGTATAGAGAAATCCCAGAGGCAGGAGCTCACAGGACAGAATTCCAGCAAGGAGAGTACTGCACAGGAAGAATGACCAGGAGGCATACAGAGGGTGCAGAGGGTCACCACTGAGGGTTCCAGTGAGTACTTATGATCACATGAAAACCTCCCAAGTTTGGGGAAGGAACTACTCAAAAAGACTGGAAGTAACTGGAGCTGACCAAGGCCTGAGAACAGTGCCTGTTTCTATTAGCCAGACTGAAGAACTTCATGATTCACAGGACATTTGGTTTGAATACACAGAGAGCCTTCCCTTAATCAGTGGGGAATAAGTAGAAATAGACTCAGCATTGTTATGGTCCTACCTAGAAAATCTTAAAAGCCAGACTCAAAAGGATCAATCTATTTCCAGTAACTTAATTGCATCCCAGAATAAAGCTCAATAATATTGAAAGGACTACAGCAACTTTCAGCACCCAACACCAGGCATTCAGGGAAGCAGAAGAATATAACCCTCAATGGAGAGATCCAATAAGCACAGAGAACCTTAAGTATAGGAAGATGTGAAGAAAATTACACGAAAGCACATACTAACCAAATTGGCTAAAACCAATGACTAAGAGAACATCTTAAAAGCAGTCATACAAAAAAGACAAAAGGAAAAGACAGACAAAATAAAGAGGAGGGAAGATAAGGGTGACAGCAGATTTCTCAGAAGAAACAATGCAAGTGAGAAGCCATTGGAGCTGCATTTTAAAAGTACTGAAAGAAAAAAATTGCCAATCTTGAATTCTGTTCCCAGTGAAAATATTTTTCAAAAACAAAGATGAATAAAGACTTTTTTCAGATTGGAAAAGCAATTCCATCAAGTGAATATATTATAATTTTTCTATT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:ENSG00000124835.2]] | + | [[Category:Intergenic]][[Category:ENSG00000124835.2]][[Category:lnc-COL6A3-6]] |
Revision as of 09:29, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000244820.2 |
Source |
Gencode19 |
Same with |
lnc-COL6A3-6:1 |
Classification |
intergenic |
Length |
2231 nt |
Genomic location |
chr2-:237957242..237964810 |
Exon number |
7 |
Exons |
237957242..237957609,237958055..237958823,237959586..237959953,237962990..237963134,237963643..237963764,237964032..237964369,237964690..237964810 |
Genome context |
|
Sequence |
000001 GCCTTGGCTG GCCATGTGCA CCTCATTCCA TGCCATTCCA ACAGTTGCTG TGCTCCCAGG CTTATATAAG AAGAACCAGT 000080
000081 TTTCCCACTT CATGATTTTG CAGCTTAATG GGATGGATAT GGAAGAGAAT AACTTAGCTT CTAGACAGGC ACAATCGCAG 000160 000161 ACGTACACAG AGGCTGGAAG ACGGTGCACA CCATTGAGAT ACGTGTCTCA TCCAGCCCGC CACATGCAGC CGGAACCAGG 000240 000241 CCACCGCCTG GGTGTCCCTT GTGTCCTGTC CTCCTACCTC TTCTCTCTGG TCCCCACATT CCTTCCAGAG TTTCTCATAC 000320 000321 ATGGATTGCT CCCAGGCTCC CTTCCATTGG GGGCCAGAGG TTCTCACAGA GCACAGAGAA GGGGACCATT CGCCCCTGGG 000400 000401 ACCATCAGGG GAATGATCTA GAAGTCAAGC AAATGTTCTA GCCCTTCAGG GTCTTCAAGG GAGATTACGG GGGAAGAAGG 000480 000481 CTGAGGTAGA GAGCAGGGCC TCTATACATT TAAGCTCATA GAGATACAGA GCATATGAAG ATATGGGAAT TCAGAAGAGT 000560 000561 TCCGTCCAAC AGAAATGTAA TATTGTAAAG TAACAGCAGC AGCAGCAGCA GCAGCAGCAG CAGCACTTGA ATATGATACC 000640 000641 AACAAACAGG AAGTGTCAGG AAGACGCCTT GCAGAACTGT CAGCCTGTGG AGTTGTTTCC CCAAGAGAGT TTGGAGTTAG 000720 000721 AAAGAGATTG TCCTCTTCCT GTCACATGTG ACACTGGGAC TACTCACTCT CATCAAGAGA AACATGACAC TTCTCACAGG 000800 000801 GGTGTAGACT AGCCCCCCAC GATAATCATG CAATAGCCCT AACATCAATT CATGCACTGG GATGTTCGTG AATTAATATT 000880 000881 AAATAATATT ACAGAATGGA CAGCAAGGGA ATTCAATTCC TTCTTATATC ACCCTGAGAG TGGAGCCTAC AAATCCTCCT 000960 000961 GAGTCTTTGA GGTTCTCTAT TCCTGTTATC CTTGAACAAG AAAATGTGCA CATGTACACA CACACACACA CACACACACA 001040 001041 CACACCACTA ATTTCCCTGA AAACACAAGA ATGAGCAATA ATAGATATGC ACAGACAAAA TGAAGTGATG GGGATTTTAT 001120 001121 TTACCTTCTA CCCTGAAACA ATCAAAACAC AGACAAAATA TGTGATATAA TGTTTTCAAG TCACTGGACA TCAAACAATG 001200 001201 AAGGGCAGTG AACCCTCTGA GATAGCAAAT GAACAATAAT GAGGCCTCCA ATTGCTCAGT CTGTCTTCCT TGATAGTGTT 001280 001281 TCCAGGCTCC TGTTCAGAGA AGGGGGAACC CAGGCAGAGC TCAGTGGAGT CCCTGAGTTG GAGAGACACA ACTGAGAGTA 001360 001361 TAGAGAAATC CCAGAGGCAG GAGCTCACAG GACAGAATTC CAGCAAGGAG AGTACTGCAC AGGAAGAATG ACCAGGAGGC 001440 001441 ATACAGAGGG TGCAGAGGGT CACCACTGAG GGTTCCAGTG AGTACTTATG ATCACATGAA AACCTCCCAA GTTTGGGGAA 001520 001521 GGAACTACTC AAAAAGACTG GAAGTAACTG GAGCTGACCA AGGCCTGAGA ACAGTGCCTG TTTCTATTAG CCAGACTGAA 001600 001601 GAACTTCATG ATTCACAGGA CATTTGGTTT GAATACACAG AGAGCCTTCC CTTAATCAGT GGGGAATAAG TAGAAATAGA 001680 001681 CTCAGCATTG TTATGGTCCT ACCTAGAAAA TCTTAAAAGC CAGACTCAAA AGGATCAATC TATTTCCAGT AACTTAATTG 001760 001761 CATCCCAGAA TAAAGCTCAA TAATATTGAA AGGACTACAG CAACTTTCAG CACCCAACAC CAGGCATTCA GGGAAGCAGA 001840 001841 AGAATATAAC CCTCAATGGA GAGATCCAAT AAGCACAGAG AACCTTAAGT ATAGGAAGAT GTGAAGAAAA TTACACGAAA 001920 001921 GCACATACTA ACCAAATTGG CTAAAACCAA TGACTAAGAG AACATCTTAA AAGCAGTCAT ACAAAAAAGA CAAAAGGAAA 002000 002001 AGACAGACAA AATAAAGAGG AGGGAAGATA AGGGTGACAG CAGATTTCTC AGAAGAAACA ATGCAAGTGA GAAGCCATTG 002080 002081 GAGCTGCATT TTAAAAGTAC TGAAAGAAAA AAATTGCCAA TCTTGAATTC TGTTCCCAGT GAAAATATTT TTCAAAAACA 002160 002161 AAGATGAATA AAGACTTTTT TCAGATTGGA AAAGCAATTC CATCAAGTGA ATATATTATA ATTTTTCTAT T |