Difference between revisions of "ENST00000423923.1"
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sequence = <dnaseq>AGCCCAGCATGCGCCCCCTCCCACACATCCAGGACAGGGATCTGGACGGCTGTGGGTTCAGGTCAACAAATGTCCATGGAGTCACCCATCAATCCAAGGCTCCCAGCAGAAGGCAGACAGTGTGACTTGGCTACAGGCTTTGCCATTCGCTGCCTGTGAGACACAAGCAAGTAGGCGAAGATATCCAAGCCTCAGTTCTCATGAAGCATCAGAATGATGGTATGATTGAGCATGGGGCTGTTGGAAGGATAATGAGTACCGCTGGCAGGAGCCAAAGGTTCACCATCACGCTGCTTTGGGGGCTGAGCAACCTTTACTGATAGGCAAGATCACTGACATAGACA</dnaseq>| | sequence = <dnaseq>AGCCCAGCATGCGCCCCCTCCCACACATCCAGGACAGGGATCTGGACGGCTGTGGGTTCAGGTCAACAAATGTCCATGGAGTCACCCATCAATCCAAGGCTCCCAGCAGAAGGCAGACAGTGTGACTTGGCTACAGGCTTTGCCATTCGCTGCCTGTGAGACACAAGCAAGTAGGCGAAGATATCCAAGCCTCAGTTCTCATGAAGCATCAGAATGATGGTATGATTGAGCATGGGGCTGTTGGAAGGATAATGAGTACCGCTGGCAGGAGCCAAAGGTTCACCATCACGCTGCTTTGGGGGCTGAGCAACCTTTACTGATAGGCAAGATCACTGACATAGACA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intronic(AS)]][[Category:lnc-OST4-2]][[Category:NONHSAG027294]] | + | [[Category:Intronic(AS)]][[Category:lnc-OST4-2]][[Category:NONHSAG027294]][[Category:ENSG00000205500.4]] |
Revision as of 18:24, 15 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000423923.1 |
| Source |
Gencode19 |
| Same with |
lnc-OST4-2:3,NONHSAT069713 |
| Classification |
intronic(AS) |
| Length |
344 nt |
| Genomic location |
chr2-:27236678..27237429 |
| Exon number |
2 |
| Exons |
27236678..27236960,27237369..27237429 |
| Genome context |
|
| Sequence |
000001 AGCCCAGCAT GCGCCCCCTC CCACACATCC AGGACAGGGA TCTGGACGGC TGTGGGTTCA GGTCAACAAA TGTCCATGGA 000080
000081 GTCACCCATC AATCCAAGGC TCCCAGCAGA AGGCAGACAG TGTGACTTGG CTACAGGCTT TGCCATTCGC TGCCTGTGAG 000160 000161 ACACAAGCAA GTAGGCGAAG ATATCCAAGC CTCAGTTCTC ATGAAGCATC AGAATGATGG TATGATTGAG CATGGGGCTG 000240 000241 TTGGAAGGAT AATGAGTACC GCTGGCAGGA GCCAAAGGTT CACCATCACG CTGCTTTGGG GGCTGAGCAA CCTTTACTGA 000320 000321 TAGGCAAGAT CACTGACATA GACA |
Predicted Small Protein
| Name | ENST00000423923.1_smProtein_200:319 |
| Length | 40 |
| Molecular weight | 4391.0233 |
| Aromaticity | 0.0769230769231 |
| Instability index | 42.9487179487 |
| Isoelectric point | 9.97662353516 |
| Runs | 6 |
| Runs residual | 0.0148944193062 |
| Runs probability | 0.0272331154684 |
| Amino acid sequence | MKHQNDGMIEHGAVGRIMSTAGRSQRFTITLLWGLSNLY |
| Secondary structure | LLLLLLLLEELLLLLLLLLLLLLLLEEEHHHHHHHHLLL |
| PRMN | - |
| PiMo | - |
