Difference between revisions of "NONHSAT009503"
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sequence = <dnaseq>caaaagaggccatgtgaggacacagCCATTCCTCTCTTCTGAGCTCCTCTCTGGCCAACTTTAACTCATCGATTGGTTCTGCCACCCGCAACGTTGGCTCCAAAGGCCTGTAGCGTTGTTCTAATACTTCGGTGATATCTCGGAAGGGCCCCTGACAAGACAGGATGAGGAACATATTTTATATGGAAGATTTTTTTGAGgatcactcacccagagggaaatgagttacca</dnaseq>| | sequence = <dnaseq>caaaagaggccatgtgaggacacagCCATTCCTCTCTTCTGAGCTCCTCTCTGGCCAACTTTAACTCATCGATTGGTTCTGCCACCCGCAACGTTGGCTCCAAAGGCCTGTAGCGTTGTTCTAATACTTCGGTGATATCTCGGAAGGGCCCCTGACAAGACAGGATGAGGAACATATTTTATATGGAAGATTTTTTTGAGgatcactcacccagagggaaatgagttacca</dnaseq>| | ||
}} | }} | ||
− | [[Category:Antisense]][[Category:NONHSAG004294]] | + | [[Category:Antisense]][[Category:NONHSAG004294]][[Category:Transcripts]] |
Revision as of 10:55, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009503 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
231 nt |
Genomic location |
chr1-:217950200..217999558 |
Exon number |
3 |
Exons |
217950200..217950230,217955467..217955641,217999534..217999558 |
Genome context |
|
Sequence |
000001 caaaagaggc catgtgagga cacagCCATT CCTCTCTTCT GAGCTCCTCT CTGGCCAACT TTAACTCATC GATTGGTTCT 000080
000081 GCCACCCGCA ACGTTGGCTC CAAAGGCCTG TAGCGTTGTT CTAATACTTC GGTGATATCT CGGAAGGGCC CCTGACAAGA 000160 000161 CAGGATGAGG AACATATTTT ATATGGAAGA TTTTTTTGAG gatcactcac ccagagggaa atgagttacc a |
Predicted Small Protein
Name | NONHSAT009503_smProtein_164:223 |
Length | 20 |
Molecular weight | 2419.6917 |
Aromaticity | 0.210526315789 |
Instability index | 101.937368421 |
Isoelectric point | 5.46490478516 |
Runs | 4 |
Runs residual | 0.0402476780186 |
Runs probability | 0.0150812577283 |
Amino acid sequence | MRNIFYMEDFFEDHSPRGK |
Secondary structure | LLLEEEHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |