Difference between revisions of "NONHSAT062829"
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sequence = <dnaseq>gccatgtgcagcagggcattcctgtagtcccagctactcgggaggctgaggcaggaggattgcttgacccaggagttctgggctgtagtgcactgcaccaatcaagtgtctgcactaagttcagcatcaatatggtgacctcttgagagcaggatgaccaagttgtccaaagagggatgaactggcccaggtcagaaatggagcaggtcaaaactcctgtgctgatcagtagggagatcgtgcgtatgaatagccactgcactccagcctgggcaacatagtgagacctgtc</dnaseq>| | sequence = <dnaseq>gccatgtgcagcagggcattcctgtagtcccagctactcgggaggctgaggcaggaggattgcttgacccaggagttctgggctgtagtgcactgcaccaatcaagtgtctgcactaagttcagcatcaatatggtgacctcttgagagcaggatgaccaagttgtccaaagagggatgaactggcccaggtcagaaatggagcaggtcaaaactcctgtgctgatcagtagggagatcgtgcgtatgaatagccactgcactccagcctgggcaacatagtgagacctgtc</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intronic(S)]][[Category:NONHSAG025063]] | + | [[Category:Intronic(S)]][[Category:NONHSAG025063]][[Category:Transcripts]] |
Latest revision as of 22:48, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT062829 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intronic(S) |
| Length |
292 nt |
| Genomic location |
chr19-:17021303..17021594 |
| Exon number |
1 |
| Exons |
17021303..17021594 |
| Genome context |
|
| Sequence |
000001 gccatgtgca gcagggcatt cctgtagtcc cagctactcg ggaggctgag gcaggaggat tgcttgaccc aggagttctg 000080
000081 ggctgtagtg cactgcacca atcaagtgtc tgcactaagt tcagcatcaa tatggtgacc tcttgagagc aggatgacca 000160 000161 agttgtccaa agagggatga actggcccag gtcagaaatg gagcaggtca aaactcctgt gctgatcagt agggagatcg 000240 000241 tgcgtatgaa tagccactgc actccagcct gggcaacata gtgagacctg tc |
Predicted Small Protein
| Name | NONHSAT062829_smProtein_176:280 |
| Length | 35 |
| Molecular weight | 3999.6219 |
| Aromaticity | 0.0588235294118 |
| Instability index | 50.9558823529 |
| Isoelectric point | 8.00030517578 |
| Runs | 7 |
| Runs residual | 0.0197319434103 |
| Runs probability | 0.0355060943297 |
| Amino acid sequence | MNWPRSEMEQVKTPVLISREIVRMNSHCTPAWAT |
| Secondary structure | LLLLLLHHHLLLLLEEEEHHHEEELLLLLLLLLL |
| PRMN | - |
| PiMo | - |
