Difference between revisions of "Lnc-FOXD4L6-1:3"

Revision as of 10:20, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-FOXD4L6-1:3
Source	LNCipedia2.1
Same with	NONHSAT131654
Classification	intergenic
Length	2888 nt
Genomic location	chr9-:69174242..69181618
Exon number	5
Exons	69174242..69174523,69175960..69176070,69176914..69178388,69179394..69179617,69180823..69181618
Genome context
Sequence	000001 TCCTAATAGC CAGGGGGGGA AGAGGGGCTG GCTCTCAGTC CCTGCCTCGC GGGTGGTCCT TCACCCCGCT GCGATGGGGG 000080 000081 TCCTAAGAGC AAGGGGGGGA AGTGGGGCTG GCTCTCTGTC CCCGCCTCGC CGGGGGTGCC TCGCACCCTT GCGATGGGGG 000160 000161 TCCTAAGAGC CAGTAGGGGA AGAGGAGCTG GCTCTCAGTC ACCACAGCAT GGGGGGCCTT TCTGTTCTGG TTTTGCCCAA 000240 000241 GAGTAAGCTT ATTTGCATCT GGTTCTAGCA AGGGAATTGC TGCGAAGGCC CTCAAACAGG GGGGCCATCC TTTCGAATCC 000320 000321 CTATCTAGTT GTTTAGAGAT GTAGGCCACC GGCCTCAGCC AAGGCCCCAC AGTTTGGGTT AAAAGTCCAG CTGCCATCTT 000400 000401 TTCTCTCTGA CGCATACAAT GGAAAAGGCT TTGTGAGATC GGGTAGCCCC TCGGCTGGGG CTTTCAGAAG TTTTTCCTTT 000480 000481 AAGTCATGAA AGACTTGCTG TTGTTGGAAT CCCCATTCCA AAAGTTCCCG GTCCCCGCCC CCATTGTGAC CTCATACAAA 000560 000561 GGCTTGGCTA ATACTGCAAA GTTTGGGATT CCCAGTCTAC AAAACCCCAC AGCTCCTAGG AATTCTCTCA CCACCCTTGT 000640 000641 GCCTTTAGGC TTCGGTAGAT TGCAAATGAC CTGCTTTCTT TCGGATCCCG GGCTGCTTTC GGACACCTGT CGAATAGTAA 000720 000721 ATCCCAAGTA AGGTACCTGC GGTCGTCGGC AGATCTGAAT TTTCTTCTTG GACACCTAAT ACCCACAGTC CTCCAGAGAC 000800 000801 CGAGAGGTTG ATGTCACTCC CAATATCGGA GGAAGTATAC ACCCCCGTGT GAGATGGTCC TTAATAATAT TCCACGGCGG 000880 000881 AGGGGGTGAT ATGACTACAT ACATGGCAGA AAGTGGAAAC CTCCCAGGGA TATTGTTCCC ACGATCCTGG AGGGAAGAAG 000960 000961 ATGATGTTAC TTTCAATATG ACAGAAGGTG GATGAAGTGG TGGACTGCCC CTCCACACCT GTGGACACGC CCCCACTGAT 001040 001041 ATTCCTTCTA ATTGCAGCGT GGGAGAGGAG GATATGACAC GCGATATCGC AGGGAGTAGA AACACCCCTG TGATACTGTT 001120 001121 CTTAATATTC AGGGAGGAAG AGGATGATAT TACTCCCAAT ACAGACGGGT GTACACCCTC TGTACACCGA GGGTGTACAC 001200 001201 CTGTCTGTGA AAGAGTTCGT AATCTCCAGA GGGGGAGATG ATATTACTCA CAATATGGTA AAGAGGCTGT GAGTCCACGG 001280 001281 AGGATCCTCA GAGCCAGCGG GGGAAGAGGG GCTGGCTCTC AGTCCCCGCC TCGCGGGGGT GACTCCCCCC AGTGCGATGG 001360 001361 GGGTCCTAAG AGCCAGTGGG GGAAGAGGGG CTGGCTCTGA GACCCCGCCT CGCGGGGGGT GCCTCCCCGC CCTGTGATGG 001440 001441 GGGTCCGAAG AGCCAGAAGG CTTAGAGGGG CTGGCTCTCA GTCCCCGCCT CGCGGGGGGT GCCTCCTCCC CCTGCGATGG 001520 001521 GGGTCGTAAG AGCCACTGGG GGAATAGGGG CTTGCTCTCA GTCACCGCCT CGCGGGGGGT GCCTCCTTTC CTTTCTACAT 001600 001601 AGACACAGTG ACAGTCTGAT CTCTCTTTCT TTTCCCTACA GATGGACACG CCCCCACTGA TATTGTTTTT AATGCAGCGT 001680 001681 GGGAGGGGAG GATATGACAC GCGATATCGC AGGTAGTAGA AACACCCCTT TGATAGTGTT CTTAATATTC AGGGAGGAAG 001760 001761 AAGATGATGT TACTCCCAAT ACAGACGGAT GTACACCCTC TGTACACCGA GGGTGTACAC CCGTCTGTGA AGGAGTTCGT 001840 001841 AATCTCCAGA GGTGGAGATG ATATTACTCA CAATATGGTA AACAGGCTGT GAGTCCATCG CGGATCCTCA GAGCCAGGTG 001920 001921 GGGAAGAGGG GCTGGCTGTC AGTCCCCTCC TCGCGGGG

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>TCCTAATAGCCAGGGGGGGAAGAGGGGCTGGCTCTCAGTCCCTGCCTCGCGGGTGGTCCTTCACCCCGCTGCGATGGGGGTCCTAAGAGCAAGGGGGGGAAGTGGGGCTGGCTCTCTGTCCCCGCCTCGCCGGGGGTGCCTCGCACCCTTGCGATGGGGGTCCTAAGAGCCAGTAGGGGAAGAGGAGCTGGCTCTCAGTCACCACAGCATGGGGGGCCTTTCTGTTCTGGTTTTGCCCAAGAGTAAGCTTATTTGCATCTGGTTCTAGCAAGGGAATTGCTGCGAAGGCCCTCAAACAGGGGGGCCATCCTTTCGAATCCCTATCTAGTTGTTTAGAGATGTAGGCCACCGGCCTCAGCCAAGGCCCCACAGTTTGGGTTAAAAGTCCAGCTGCCATCTTTTCTCTCTGACGCATACAATGGAAAAGGCTTTGTGAGATCGGGTAGCCCCTCGGCTGGGGCTTTCAGAAGTTTTTCCTTTAAGTCATGAAAGACTTGCTGTTGTTGGAATCCCCATTCCAAAAGTTCCCGGTCCCCGCCCCCATTGTGACCTCATACAAAGGCTTGGCTAATACTGCAAAGTTTGGGATTCCCAGTCTACAAAACCCCACAGCTCCTAGGAATTCTCTCACCACCCTTGTGCCTTTAGGCTTCGGTAGATTGCAAATGACCTGCTTTCTTTCGGATCCCGGGCTGCTTTCGGACACCTGTCGAATAGTAAATCCCAAGTAAGGTACCTGCGGTCGTCGGCAGATCTGAATTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGAGACCGAGAGGTTGATGTCACTCCCAATATCGGAGGAAGTATACACCCCCGTGTGAGATGGTCCTTAATAATATTCCACGGCGGAGGGGGTGATATGACTACATACATGGCAGAAAGTGGAAACCTCCCAGGGATATTGTTCCCACGATCCTGGAGGGAAGAAGATGATGTTACTTTCAATATGACAGAAGGTGGATGAAGTGGTGGACTGCCCCTCCACACCTGTGGACACGCCCCCACTGATATTCCTTCTAATTGCAGCGTGGGAGAGGAGGATATGACACGCGATATCGCAGGGAGTAGAAACACCCCTGTGATACTGTTCTTAATATTCAGGGAGGAAGAGGATGATATTACTCCCAATACAGACGGGTGTACACCCTCTGTACACCGAGGGTGTACACCTGTCTGTGAAAGAGTTCGTAATCTCCAGAGGGGGAGATGATATTACTCACAATATGGTAAAGAGGCTGTGAGTCCACGGAGGATCCTCAGAGCCAGCGGGGGAAGAGGGGCTGGCTCTCAGTCCCCGCCTCGCGGGGGTGACTCCCCCCAGTGCGATGGGGGTCCTAAGAGCCAGTGGGGGAAGAGGGGCTGGCTCTGAGACCCCGCCTCGCGGGGGGTGCCTCCCCGCCCTGTGATGGGGGTCCGAAGAGCCAGAAGGCTTAGAGGGGCTGGCTCTCAGTCCCCGCCTCGCGGGGGGTGCCTCCTCCCCCTGCGATGGGGGTCGTAAGAGCCACTGGGGGAATAGGGGCTTGCTCTCAGTCACCGCCTCGCGGGGGGTGCCTCCTTTCCTTTCTACATAGACACAGTGACAGTCTGATCTCTCTTTCTTTTCCCTACAGATGGACACGCCCCCACTGATATTGTTTTTAATGCAGCGTGGGAGGGGAGGATATGACACGCGATATCGCAGGTAGTAGAAACACCCCTTTGATAGTGTTCTTAATATTCAGGGAGGAAGAAGATGATGTTACTCCCAATACAGACGGATGTACACCCTCTGTACACCGAGGGTGTACACCCGTCTGTGAAGGAGTTCGTAATCTCCAGAGGTGGAGATGATATTACTCACAATATGGTAAACAGGCTGTGAGTCCATCGCGGATCCTCAGAGCCAGGTGGGGAAGAGGGGCTGGCTGTCAGTCCCCTCCTCGCGGGGGGTGCCTCCCCCACTGCTATGGGGATCCCAAGAGCCAGTGGGGGAAGAGGTGCTGGCTCTCAGTCTCCGCCTCGCGAGGTGCCTCCCCACCCTGCGATCGGGGTCCGAAGAGCCAGGGGGGAAGAGGGGCTGGCTCTCTTCGTGGATGATTCTTTTTCCATTCTCAGGCAGTTTTCTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTGAGACTGAGTCTTGCTCTGTTGCCCATGCTTTGCTCGATCTCGGGTGACTGCAACCACTGCCTCCCAGGTTCAAGAGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTAGAGGCGTGTGTCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTTGCCAGGATGGTCTCTATCTCCTGCCCTTGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTGCAGGTGCGAGCCACCGGGTCCAGCCTCTCAGGCGATTTTCATACCTGCATACTCTGGTCACTACTCTGTTAAACAGTCAAGGAGGCTGAGTGCCACGTGCTGACGTCACTAAGATCAATACAGCAAACTCTGAAAGATGGACAGAGAGACAGGAGATGGTCCTTTATAATGCAGTGTGATCTGTGCTGCAATAGAGTTTTGGAAGCTAGAAGTTCAAAACGAGGTGTTGGCAGCACCATGCTCTCTCTGAAGATGCTAGGAAGAATCTGCTCCATGCCTTTCCATTCGCTTCTGGGGTTTCCTGCAAGCCCTGACATTCCTTGGCTTGTAGATGCATCACCCCAGTTTCCGCCCCCATCATCACATGGCCTCCTCTCTGTGTGTGCCTCTGCGTTCCCTCTATTCTTCTTCTAAGGACACCGACACCAGTCATAGTGGATTAAGTGTCCACTCCTAACCAATTACATCTGCAACAACC</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-FOXD4L6-1]]
+[[Category:Intergenic]][[Category:lnc-FOXD4L6-1]][[Category:NONHSAG052461]]