Difference between revisions of "NONHSAT107379"
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sequence = <dnaseq>ACTTAGCTTTTACTTTCTTTCTTTTTTTTTTTTTTTTGCCGACATTCCTGGAAACAATTACCATTCAGAACGTGAGACAGAATCCAGCACCACCCTCCAACCAGTGGCAGCAGATCCCACTGGCTGGAAGGGGCCCTCCAAAGCAGGGCAGGAGCCTTTGAAATGTCACTCTTGCAAACCCAACCTCTATATGGCAACACAGATCATAAGCACAGAAAGGAACTGTGTTACAACTGGTGTTATGTTTGATGGGGAGTTGCAGGAGTTAATCAAGGAAGAATAAAACCTAGGGAAAAATATTGTACAAGAATTATTGATGGGTTTGTATTTAAAATCATCGTTTTCATTAGACTTTTTTTTTTTACCCCTTTCAGTGGTCATGCTGGCATCGAGGCCCTGAGTGGGTGCTCATAGCCAGGGCCTATTGAACATCACTGAAGGGGGAGACTCCAGGGACCTGCAAGAGGGCAGGATGACCAGGTAGACGAGGACACCATAGTCCTGATTTTGAGTCTTTGCTTTGTTTTTTATTAGCTGTGTGACCTTCAACCAGTGCCTTACACACTGGGACTGTGGCAGAGACAGCTTGTTCATCCTCAAATCATTTCCTTTTCCACTGGGCACAGGGGAGAAGCCAGGAGCCGCCCCAGGACTGACTCTGGCCAATGGGATGTCCATGGGAGGCACGTCTGCTGCACCCAGACCTGGCCATTGACATGTCCACGTGCTCCTTGACTCTGGCTCTTCCCCTACCTGCTAGAGAAGGTGCTGATGGCTAGAGAAGGGCAGAGCCACAGACGGAAGGGGCCTGGGGCCTGAAACCCCACGTGAAAAGCCACAGTGCTGGAAGTGGTGTGTGGGTGTGCCTGTGTGTTAGCAGGGAATACACTTCTATTGTGCTGAGCCCCTGATAATGTGGGGTTTATCTATTACCGCATCTAGAGTTAGCTTCACTGATACAGGCACATTTTCCTTGTCTGTATCATACAGGTAAAAATTGATCCTTATCTTAGGTGTCATAAAGGTGAAAAGAAATAATGTATAGGAAATGATTTTAGAAATTCTGTAAGTCCTCGCTGGGCACGGTGGTTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAGGCGGGCAGATCACAAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGCCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAACTGAGATCGCGCCACTGCATTCCAGCCTGGGCGACAAAGTGAGACTCCGTCTCAAAAAAAAAAAAAAGAAATTCTACAAGTCCTCATCACCAATCTGGTTAATCAACACGGTTGCACCTGCTGGCAGCCCACTAGATCCATGGTATCCTTGCTCCTAGTCAACGCTAGGTGAGGCTCCCCAGCCAGAAGGAGGCCTGAATCCACAAGCCATTCCTGAAGCCCCATGATGGACCCTGTTCATGTCCAAGCAGACACCATTCCTCCCACTTTTGCTTCTCTGCATGGGATGCTGCAGTGCAGGAGGTCAATTAACTCTTCCAGCTCATCCCTGGTGGCACATTTGGTGTTCTGTTACATTTCTTCTATTTTGCTACCTGGAATTTCCCTCCCAAATGATTCCTTTTTTTCTGATAACAAAGGATTACATGCCTATTGTGGAAATTTTGAAAAGAAAATTTTATTGTGAAAGAGTAAAAAATGCACCCACTAAAGGTGATCATTAACAGTATTATGGCATATTTCTTCCTGTATTTCTTTCTTCTTTCTTTCTTTTTTAAAATATCTCACCTCTGGCTGAATCCTCATATTCCTTTTTTCTTTTTTTGGTGGAGGTTGTTGAAAATTCTTATATTTCTTAAGGTAAGTATATATATATTTTTTACCATAGTCGAGAACACCATACACATATAATTTGGTATCTTGCATTTTATGTTCTGCTTGTCACGATCATAGCATTTCCCATATCACTAAAACCTCTTACAGTCATGACTTTTCTTAGAGTTCTATACTATTCCATTGTAAGGATGTACCATGATTTTCCCTATTGTTAGTTAGGTTGTTTCTAGTTTTTCAGTCTTATAAGGAGTGCTGCAGTGAACATGTTTGTAAACTGTGGATTGCTTCCTTTGCAATTTGAATTCTTTAAGGCCATTCATGTTTTGGATCTGGGTAACATGTAGAAACCTATTACATTTCTTAGATACAATCTGGTTTCCAGAATATAGCAGCATGGGAAGGTCAAATGTGGGCTACAAGGAGCCCCAGGTTCGATAGCGGAGATTCTTGAAGCCCGGACGGAAGTGTTCTTTGCACTAGCTCTAGGTACAGGTGTCTGAACTGCCTGAGCATAAGAAACGTGATGGTTCATTTTAGGTGTCGACTTGCCTAGATTATGGGGTACTCAGCTGGCAAAGCATTATTTCTTGGTATGTCTGTGAGGGTGTTTCCAGAAGAGATTGACATTTGAATCAGTGGACTGAGTAAGGAAGATCCGCCCTCACCCAGTGTGGGCGGGCACCAGCCAATCTGCTGAGAGTCCTGATAGAACAAAAAGGCAGAGGGAGGGCAAATTTTCCCTCTTCTTCTGGAGCTGGGACACCCTTCTCCTCCTACCCTTGGACACCAGCACTCCAGGTTCTTTGGCCTTCAACTCTGGAACTTGCACATACCCCATAGGATTCTCAGGCCTTAGTCTTGGACTGAGCCACACTGTCGACTTCCCTGGGCCTCCGGCTTGCCGTTGGCTCTTCGTGGGACTTCTCAGCCTCCATAATCACGAGTCATTTTTCCTAATGAATCCTCTCTCATTATCTATCATCTGTCCATCCATCCTATTTGTTTTGTCTAAGTGGAAAACCCTAATATAAGAGACAGTGGAGACCCCCCTTCTTGTTCTCTGTGGGGGACATGCCGTTCTTTTTTCTTGGAAGAGTGTGGGTTGCACTGTCGGGCCAGACAACACACTTCTTATAGTGTTATTCTATCTTTCTGTCTCTCTTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTCTCTCCCTCCCTCTCTCCCTCCCCCTCTCTCTTTTTCTTTTTTTCTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTCTCCTTCCTTCCTTCTTTCCTTCCTTCCTTTCTCCTACACCTGAGCATTTTTTTATTGAGATGTAATTAATATTCCATAAAATTTGCCTTTTTAAAGTGTACAATTTGATGGTTTTTAATGTAATCACAAAGTTTTGTAACCATCACCACTAATTCCAGGACATTTCTATTACTCCCAGAAAGAAACACCAACCCCATTAATAGTCACTTCCCATGCTCCCCTCCTCCAGCCCTTGGCAACCACTAATCTACTTTCTGTCTCTATGGATTTGCCTTTCCAGACTTCATATAAATGGAATCTATAACGTGGCTTTTGGGGTCTGGCTTATTTTATGTAGCATAATGTTCTCAAGGTTCA</dnaseq>| | sequence = <dnaseq>ACTTAGCTTTTACTTTCTTTCTTTTTTTTTTTTTTTTGCCGACATTCCTGGAAACAATTACCATTCAGAACGTGAGACAGAATCCAGCACCACCCTCCAACCAGTGGCAGCAGATCCCACTGGCTGGAAGGGGCCCTCCAAAGCAGGGCAGGAGCCTTTGAAATGTCACTCTTGCAAACCCAACCTCTATATGGCAACACAGATCATAAGCACAGAAAGGAACTGTGTTACAACTGGTGTTATGTTTGATGGGGAGTTGCAGGAGTTAATCAAGGAAGAATAAAACCTAGGGAAAAATATTGTACAAGAATTATTGATGGGTTTGTATTTAAAATCATCGTTTTCATTAGACTTTTTTTTTTTACCCCTTTCAGTGGTCATGCTGGCATCGAGGCCCTGAGTGGGTGCTCATAGCCAGGGCCTATTGAACATCACTGAAGGGGGAGACTCCAGGGACCTGCAAGAGGGCAGGATGACCAGGTAGACGAGGACACCATAGTCCTGATTTTGAGTCTTTGCTTTGTTTTTTATTAGCTGTGTGACCTTCAACCAGTGCCTTACACACTGGGACTGTGGCAGAGACAGCTTGTTCATCCTCAAATCATTTCCTTTTCCACTGGGCACAGGGGAGAAGCCAGGAGCCGCCCCAGGACTGACTCTGGCCAATGGGATGTCCATGGGAGGCACGTCTGCTGCACCCAGACCTGGCCATTGACATGTCCACGTGCTCCTTGACTCTGGCTCTTCCCCTACCTGCTAGAGAAGGTGCTGATGGCTAGAGAAGGGCAGAGCCACAGACGGAAGGGGCCTGGGGCCTGAAACCCCACGTGAAAAGCCACAGTGCTGGAAGTGGTGTGTGGGTGTGCCTGTGTGTTAGCAGGGAATACACTTCTATTGTGCTGAGCCCCTGATAATGTGGGGTTTATCTATTACCGCATCTAGAGTTAGCTTCACTGATACAGGCACATTTTCCTTGTCTGTATCATACAGGTAAAAATTGATCCTTATCTTAGGTGTCATAAAGGTGAAAAGAAATAATGTATAGGAAATGATTTTAGAAATTCTGTAAGTCCTCGCTGGGCACGGTGGTTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAGGCGGGCAGATCACAAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGCCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAACTGAGATCGCGCCACTGCATTCCAGCCTGGGCGACAAAGTGAGACTCCGTCTCAAAAAAAAAAAAAAGAAATTCTACAAGTCCTCATCACCAATCTGGTTAATCAACACGGTTGCACCTGCTGGCAGCCCACTAGATCCATGGTATCCTTGCTCCTAGTCAACGCTAGGTGAGGCTCCCCAGCCAGAAGGAGGCCTGAATCCACAAGCCATTCCTGAAGCCCCATGATGGACCCTGTTCATGTCCAAGCAGACACCATTCCTCCCACTTTTGCTTCTCTGCATGGGATGCTGCAGTGCAGGAGGTCAATTAACTCTTCCAGCTCATCCCTGGTGGCACATTTGGTGTTCTGTTACATTTCTTCTATTTTGCTACCTGGAATTTCCCTCCCAAATGATTCCTTTTTTTCTGATAACAAAGGATTACATGCCTATTGTGGAAATTTTGAAAAGAAAATTTTATTGTGAAAGAGTAAAAAATGCACCCACTAAAGGTGATCATTAACAGTATTATGGCATATTTCTTCCTGTATTTCTTTCTTCTTTCTTTCTTTTTTAAAATATCTCACCTCTGGCTGAATCCTCATATTCCTTTTTTCTTTTTTTGGTGGAGGTTGTTGAAAATTCTTATATTTCTTAAGGTAAGTATATATATATTTTTTACCATAGTCGAGAACACCATACACATATAATTTGGTATCTTGCATTTTATGTTCTGCTTGTCACGATCATAGCATTTCCCATATCACTAAAACCTCTTACAGTCATGACTTTTCTTAGAGTTCTATACTATTCCATTGTAAGGATGTACCATGATTTTCCCTATTGTTAGTTAGGTTGTTTCTAGTTTTTCAGTCTTATAAGGAGTGCTGCAGTGAACATGTTTGTAAACTGTGGATTGCTTCCTTTGCAATTTGAATTCTTTAAGGCCATTCATGTTTTGGATCTGGGTAACATGTAGAAACCTATTACATTTCTTAGATACAATCTGGTTTCCAGAATATAGCAGCATGGGAAGGTCAAATGTGGGCTACAAGGAGCCCCAGGTTCGATAGCGGAGATTCTTGAAGCCCGGACGGAAGTGTTCTTTGCACTAGCTCTAGGTACAGGTGTCTGAACTGCCTGAGCATAAGAAACGTGATGGTTCATTTTAGGTGTCGACTTGCCTAGATTATGGGGTACTCAGCTGGCAAAGCATTATTTCTTGGTATGTCTGTGAGGGTGTTTCCAGAAGAGATTGACATTTGAATCAGTGGACTGAGTAAGGAAGATCCGCCCTCACCCAGTGTGGGCGGGCACCAGCCAATCTGCTGAGAGTCCTGATAGAACAAAAAGGCAGAGGGAGGGCAAATTTTCCCTCTTCTTCTGGAGCTGGGACACCCTTCTCCTCCTACCCTTGGACACCAGCACTCCAGGTTCTTTGGCCTTCAACTCTGGAACTTGCACATACCCCATAGGATTCTCAGGCCTTAGTCTTGGACTGAGCCACACTGTCGACTTCCCTGGGCCTCCGGCTTGCCGTTGGCTCTTCGTGGGACTTCTCAGCCTCCATAATCACGAGTCATTTTTCCTAATGAATCCTCTCTCATTATCTATCATCTGTCCATCCATCCTATTTGTTTTGTCTAAGTGGAAAACCCTAATATAAGAGACAGTGGAGACCCCCCTTCTTGTTCTCTGTGGGGGACATGCCGTTCTTTTTTCTTGGAAGAGTGTGGGTTGCACTGTCGGGCCAGACAACACACTTCTTATAGTGTTATTCTATCTTTCTGTCTCTCTTTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTCTCTCCCTCCCTCTCTCCCTCCCCCTCTCTCTTTTTCTTTTTTTCTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTCTCCTTCCTTCCTTCTTTCCTTCCTTCCTTTCTCCTACACCTGAGCATTTTTTTATTGAGATGTAATTAATATTCCATAAAATTTGCCTTTTTAAAGTGTACAATTTGATGGTTTTTAATGTAATCACAAAGTTTTGTAACCATCACCACTAATTCCAGGACATTTCTATTACTCCCAGAAAGAAACACCAACCCCATTAATAGTCACTTCCCATGCTCCCCTCCTCCAGCCCTTGGCAACCACTAATCTACTTTCTGTCTCTATGGATTTGCCTTTCCAGACTTCATATAAATGGAATCTATAACGTGGCTTTTGGGGTCTGGCTTATTTTATGTAGCATAATGTTCTCAAGGTTCA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG042862]] | + | [[Category:Intergenic]][[Category:NONHSAG042862]][[Category:Transcripts]] |
Latest revision as of 01:43, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107379 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3567 nt |
Genomic location |
chr6+:4275023..4278589 |
Exon number |
1 |
Exons |
4275023..4278589 |
Genome context |
|
Sequence |
000001 ACTTAGCTTT TACTTTCTTT CTTTTTTTTT TTTTTTTGCC GACATTCCTG GAAACAATTA CCATTCAGAA CGTGAGACAG 000080
000081 AATCCAGCAC CACCCTCCAA CCAGTGGCAG CAGATCCCAC TGGCTGGAAG GGGCCCTCCA AAGCAGGGCA GGAGCCTTTG 000160 000161 AAATGTCACT CTTGCAAACC CAACCTCTAT ATGGCAACAC AGATCATAAG CACAGAAAGG AACTGTGTTA CAACTGGTGT 000240 000241 TATGTTTGAT GGGGAGTTGC AGGAGTTAAT CAAGGAAGAA TAAAACCTAG GGAAAAATAT TGTACAAGAA TTATTGATGG 000320 000321 GTTTGTATTT AAAATCATCG TTTTCATTAG ACTTTTTTTT TTTACCCCTT TCAGTGGTCA TGCTGGCATC GAGGCCCTGA 000400 000401 GTGGGTGCTC ATAGCCAGGG CCTATTGAAC ATCACTGAAG GGGGAGACTC CAGGGACCTG CAAGAGGGCA GGATGACCAG 000480 000481 GTAGACGAGG ACACCATAGT CCTGATTTTG AGTCTTTGCT TTGTTTTTTA TTAGCTGTGT GACCTTCAAC CAGTGCCTTA 000560 000561 CACACTGGGA CTGTGGCAGA GACAGCTTGT TCATCCTCAA ATCATTTCCT TTTCCACTGG GCACAGGGGA GAAGCCAGGA 000640 000641 GCCGCCCCAG GACTGACTCT GGCCAATGGG ATGTCCATGG GAGGCACGTC TGCTGCACCC AGACCTGGCC ATTGACATGT 000720 000721 CCACGTGCTC CTTGACTCTG GCTCTTCCCC TACCTGCTAG AGAAGGTGCT GATGGCTAGA GAAGGGCAGA GCCACAGACG 000800 000801 GAAGGGGCCT GGGGCCTGAA ACCCCACGTG AAAAGCCACA GTGCTGGAAG TGGTGTGTGG GTGTGCCTGT GTGTTAGCAG 000880 000881 GGAATACACT TCTATTGTGC TGAGCCCCTG ATAATGTGGG GTTTATCTAT TACCGCATCT AGAGTTAGCT TCACTGATAC 000960 000961 AGGCACATTT TCCTTGTCTG TATCATACAG GTAAAAATTG ATCCTTATCT TAGGTGTCAT AAAGGTGAAA AGAAATAATG 001040 001041 TATAGGAAAT GATTTTAGAA ATTCTGTAAG TCCTCGCTGG GCACGGTGGT TCACGCCTGT AATCCCAGCA CTTTGGGAGG 001120 001121 TCGAGGCGGG CAGATCACAA GGTCAGGAGA TCAAGACCAT CCTGGCTAAC ATGGTGAAAC CCCGTCTCTA CTAAAAATAC 001200 001201 AAAAAATTAG CCGGGCGTGG TGGCGGGCGC CTGTAGCCCC AGCTACTCAG GAGGCTGAGG CAGGAGAATG GCGTGAACCC 001280 001281 GGGAGGCAGA GCTTGCAGTG AACTGAGATC GCGCCACTGC ATTCCAGCCT GGGCGACAAA GTGAGACTCC GTCTCAAAAA 001360 001361 AAAAAAAAAG AAATTCTACA AGTCCTCATC ACCAATCTGG TTAATCAACA CGGTTGCACC TGCTGGCAGC CCACTAGATC 001440 001441 CATGGTATCC TTGCTCCTAG TCAACGCTAG GTGAGGCTCC CCAGCCAGAA GGAGGCCTGA ATCCACAAGC CATTCCTGAA 001520 001521 GCCCCATGAT GGACCCTGTT CATGTCCAAG CAGACACCAT TCCTCCCACT TTTGCTTCTC TGCATGGGAT GCTGCAGTGC 001600 001601 AGGAGGTCAA TTAACTCTTC CAGCTCATCC CTGGTGGCAC ATTTGGTGTT CTGTTACATT TCTTCTATTT TGCTACCTGG 001680 001681 AATTTCCCTC CCAAATGATT CCTTTTTTTC TGATAACAAA GGATTACATG CCTATTGTGG AAATTTTGAA AAGAAAATTT 001760 001761 TATTGTGAAA GAGTAAAAAA TGCACCCACT AAAGGTGATC ATTAACAGTA TTATGGCATA TTTCTTCCTG TATTTCTTTC 001840 001841 TTCTTTCTTT CTTTTTTAAA ATATCTCACC TCTGGCTGAA TCCTCATATT CCTTTTTTCT TTTTTTGGTG GAGGTTGTTG 001920 001921 AAAATTCTTA TATTTCTTAA GGTAAGTATA TATATATTTT TTACCATAGT CGAGAACACC ATACACATAT AATTTGGTAT 002000 002001 CTTGCATTTT ATGTTCTGCT TGTCACGATC ATAGCATTTC CCATATCACT AAAACCTCTT ACAGTCATGA CTTTTCTTAG 002080 002081 AGTTCTATAC TATTCCATTG TAAGGATGTA CCATGATTTT CCCTATTGTT AGTTAGGTTG TTTCTAGTTT TTCAGTCTTA 002160 002161 TAAGGAGTGC TGCAGTGAAC ATGTTTGTAA ACTGTGGATT GCTTCCTTTG CAATTTGAAT TCTTTAAGGC CATTCATGTT 002240 002241 TTGGATCTGG GTAACATGTA GAAACCTATT ACATTTCTTA GATACAATCT GGTTTCCAGA ATATAGCAGC ATGGGAAGGT 002320 002321 CAAATGTGGG CTACAAGGAG CCCCAGGTTC GATAGCGGAG ATTCTTGAAG CCCGGACGGA AGTGTTCTTT GCACTAGCTC 002400 002401 TAGGTACAGG TGTCTGAACT GCCTGAGCAT AAGAAACGTG ATGGTTCATT TTAGGTGTCG ACTTGCCTAG ATTATGGGGT 002480 002481 ACTCAGCTGG CAAAGCATTA TTTCTTGGTA TGTCTGTGAG GGTGTTTCCA GAAGAGATTG ACATTTGAAT CAGTGGACTG 002560 002561 AGTAAGGAAG ATCCGCCCTC ACCCAGTGTG GGCGGGCACC AGCCAATCTG CTGAGAGTCC TGATAGAACA AAAAGGCAGA 002640 002641 GGGAGGGCAA ATTTTCCCTC TTCTTCTGGA GCTGGGACAC CCTTCTCCTC CTACCCTTGG ACACCAGCAC TCCAGGTTCT 002720 002721 TTGGCCTTCA ACTCTGGAAC TTGCACATAC CCCATAGGAT TCTCAGGCCT TAGTCTTGGA CTGAGCCACA CTGTCGACTT 002800 002801 CCCTGGGCCT CCGGCTTGCC GTTGGCTCTT CGTGGGACTT CTCAGCCTCC ATAATCACGA GTCATTTTTC CTAATGAATC 002880 002881 CTCTCTCATT ATCTATCATC TGTCCATCCA TCCTATTTGT TTTGTCTAAG TGGAAAACCC TAATATAAGA GACAGTGGAG 002960 002961 ACCCCCCTTC TTGTTCTCTG TGGGGGACAT GCCGTTCTTT TTTCTTGGAA GAGTGTGGGT TGCACTGTCG GGCCAGACAA 003040 003041 CACACTTCTT ATAGTGTTAT TCTATCTTTC TGTCTCTCTT TCCCTCCCTC CCTCCCTCCC TTCCTTCCTT CCTTCCTTCT 003120 003121 TTCCTTCCTT CCTCTCTCCC TCCCTCTCTC CCTCCCCCTC TCTCTTTTTC TTTTTTTCTT TCCTTCCTTC CTTCTTTCTT 003200 003201 TCTCTCTCTC TCCTTCCTTC CTTCTTTCCT TCCTTCCTTT CTCCTACACC TGAGCATTTT TTTATTGAGA TGTAATTAAT 003280 003281 ATTCCATAAA ATTTGCCTTT TTAAAGTGTA CAATTTGATG GTTTTTAATG TAATCACAAA GTTTTGTAAC CATCACCACT 003360 003361 AATTCCAGGA CATTTCTATT ACTCCCAGAA AGAAACACCA ACCCCATTAA TAGTCACTTC CCATGCTCCC CTCCTCCAGC 003440 003441 CCTTGGCAAC CACTAATCTA CTTTCTGTCT CTATGGATTT GCCTTTCCAG ACTTCATATA AATGGAATCT ATAACGTGGC 003520 003521 TTTTGGGGTC TGGCTTATTT TATGTAGCAT AATGTTCTCA AGGTTCA |
Predicted Small Protein
Name | NONHSAT107379_smProtein_1541:1804 |
Length | 88 |
Molecular weight | 10142.1141 |
Aromaticity | 0.149425287356 |
Instability index | 67.7529885057 |
Isoelectric point | 8.59393310547 |
Runs | 12 |
Runs residual | 0.000328407224959 |
Runs probability | 0.0736177353825 |
Amino acid sequence | MSKQTPFLPLLLLCMGCCSAGGQLTLPAHPWWHIWCSVTFLLFCYLEFPSQMIPFFLITK DYMPIVEILKRKFYCERVKNAPTKGDH |
Secondary structure | LLLLLLLHHHHHHHHLLLLLLLEEELLLLLLEEEEHHHHHHHHHHHLLLLLLLLEEEELL LLLHHHHHHHHHHHHHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiii iiiiiiiiiiiiiiiiiiiiiiiiiii |