Difference between revisions of "ENST00000426811.1"
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sequence = <dnaseq>CTATCTCTGGAGGGTCTTGAAGAAAGAAGAAATTCTGTATTATCCAAACAGATGGTTATGAGGATCTACTTTCAACCTTCCACGTTATGTGCTGTGAATCAAGTCTTCACCCTACCATTTATCCATTGTCTCCAAGAGCTTTTGATATATCAGGAAATAGGGAAGCCCTACATATGGAAAAGTGTAAGGATTGTAGTGGTGAGATGTGTGTTCCAGACTCTCTGGATTCAAATCCCAGCTCTGCTACTCATAACAGTACATGCTGCCCATGCATAAACAATCAAAGTTAAACCGAGAAAAGATGGATACACATGGAGCTGCTACCGATTGGGAAAGGATTTGGTTATTTTATTATTTCATAATGCTGAGCTGTGATGGACCTGACGACATCTGAGAAAAAAAAAATTGCCCAAATGAAAAAATAAATAGC</dnaseq>| | sequence = <dnaseq>CTATCTCTGGAGGGTCTTGAAGAAAGAAGAAATTCTGTATTATCCAAACAGATGGTTATGAGGATCTACTTTCAACCTTCCACGTTATGTGCTGTGAATCAAGTCTTCACCCTACCATTTATCCATTGTCTCCAAGAGCTTTTGATATATCAGGAAATAGGGAAGCCCTACATATGGAAAAGTGTAAGGATTGTAGTGGTGAGATGTGTGTTCCAGACTCTCTGGATTCAAATCCCAGCTCTGCTACTCATAACAGTACATGCTGCCCATGCATAAACAATCAAAGTTAAACCGAGAAAAGATGGATACACATGGAGCTGCTACCGATTGGGAAAGGATTTGGTTATTTTATTATTTCATAATGCTGAGCTGTGATGGACCTGACGACATCTGAGAAAAAAAAAATTGCCCAAATGAAAAAATAAATAGC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-KLF6-4]][[Category:NONHSAG005038]] | + | [[Category:Intergenic]][[Category:lnc-KLF6-4]][[Category:NONHSAG005038]][[Category:ENSG00000236892.1]] |
Revision as of 18:35, 15 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000426811.1 |
Source |
Gencode19 |
Same with |
lnc-KLF6-4:1,NONHSAT011038 |
Classification |
intergenic |
Length |
430 nt |
Genomic location |
chr10-:3574286..3579223 |
Exon number |
2 |
Exons |
3574286..3574462,3578971..3579223 |
Genome context |
|
Sequence |
000001 CTATCTCTGG AGGGTCTTGA AGAAAGAAGA AATTCTGTAT TATCCAAACA GATGGTTATG AGGATCTACT TTCAACCTTC 000080
000081 CACGTTATGT GCTGTGAATC AAGTCTTCAC CCTACCATTT ATCCATTGTC TCCAAGAGCT TTTGATATAT CAGGAAATAG 000160 000161 GGAAGCCCTA CATATGGAAA AGTGTAAGGA TTGTAGTGGT GAGATGTGTG TTCCAGACTC TCTGGATTCA AATCCCAGCT 000240 000241 CTGCTACTCA TAACAGTACA TGCTGCCCAT GCATAAACAA TCAAAGTTAA ACCGAGAAAA GATGGATACA CATGGAGCTG 000320 000321 CTACCGATTG GGAAAGGATT TGGTTATTTT ATTATTTCAT AATGCTGAGC TGTGATGGAC CTGACGACAT CTGAGAAAAA 000400 000401 AAAAATTGCC CAAATGAAAA AATAAATAGC |
Predicted Small Protein
Name | ENST00000426811.1_smProtein_86:289 |
Length | 68 |
Molecular weight | 7265.0989 |
Aromaticity | 0.0298507462687 |
Instability index | 44.3029850746 |
Isoelectric point | 5.00714111328 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0231702290526 |
Amino acid sequence | MCCESSLHPTIYPLSPRAFDISGNREALHMEKCKDCSGEMCVPDSLDSNPSSATHNSTCC PCINNQS |
Secondary structure | LEELLLLLLLLLLLLLLLELLLLLLHHHHHHHHLLLLLLEELLLLLLLLLLLLLLLLLLL LLLLLLL |
PRMN | - |
PiMo | - |