Difference between revisions of "ENST00000517635.2"

From LncRNAWiki
Jump to: navigation, search
 
Line 42: Line 42:
 
sequence = <dnaseq>ATATTGCAGAGCAACTTGAAAGGGGGAGCTGGCCGCGTAGGAGGTGAGAGCCAGCCGCAAAAATCCGTTCGGCGGCATTTTCTCTTCAAACCCGCCCGGTCGGATGTGGCATTTGAAGAAAGAAGGCGTGGGTCAATAATCAACCCGCACTTTCTCCTCCAAACTGCTGACGCGACTCTCACCGCCTTCTCAGCTAAGCCAGCTGCCGGGAAGGCCAGCTCTCCGTAAGAACCTGCCAGGGGAAGGGATTCTCTGGGCCAAGGGGACCGAGGGCTCCCGAGCAAGGGCTGGGGCGCCCTGAAAGCATACCTTTCCACTGGCGCCAAGACCCTGCCGGGCAAAACGCGGGGACCAGACCTGAGGAGCCGTGGGAGCCCAGGGAGATCTGGGGCGGGAGCTTCGTTCCGGCCAGGGCCTCTATCCGCCCCGATACGTGGCTCCTGGGCCGCGGGCCTCAGCGGGCAGAAGTGGGGCTCCGACCTCAAGATGAAGGTCCAGCGTCCTGGCATGCAGATGGTCGGTGCCCCAGCCTCAAGCCGCTCTGCTTAAATCCAAAGGACTGGCTTTGGAGCAAGCGTAGGCGAGATTATTTTAAAATAATAATTTATGCTGGCGGAAGGTTTTTATTTGTTGGTTTGCTATTGGTGTTTTGTTTTTTAAGCGAAAATGCCGATTGTTGATTTCCACCTCCAGAAATTACCAGCCGCCGCCGCTGCGCCCTTTCTAGACAAATCCCACAGCAGTTCACCCGGCTCCCCCAAAACCGCAGAGCTTTTCTTTACTGAGAGGACCCCTTGGTTCCACCAATTCCCCCAAATCCCCGTGGCTCCCGATCTCTCATCCAGGGGGACTAGAAGAAAAGATTTTCTCAGCACTAGAAGAATACTTGGAGCAGCAAAGGTGCCCGTGGTGTCTTTCTACCATTCAAGGGGTGTCCTCCTGAAGGCGTCTGAGAGGGCCTCTGGCGGTTCCAAGGCTGTGCAGCCGGGGAGGAAGGAAAAGGAAACGCCAAGACATAGAAAACCACGCTTTTCCCGTAGGAAGAACCGATGATGAGCCCTGATGAAAGAAGGAAGAAGACCCGCTGTCTGCGAAGGCCTAAAGGTTAGAAATACAGCAATTTTTCTCATGCCGAAGGAAAGGCAAAATGGTCTAAGAAACTGCAAGAGTGTGATACAAGTTTTCCTCAACAGCGAGCTGGGACTGGCGACAATTTCTTAACTCACAGCCTCCGCAGTCGCCTTAGTCGACAAAGAGAGCAGCCCACGCAGCGGCCGCCGCGCCCGTGCCCGTGGCCTTTACTTGCTTTTGCCCTGAAGTTCAGTGTAGTGGTTTGTTTGGGGCTTGCAGGAAGAAACAAACACACTCCCTCTGACTCTCCACAACCCATCTTTGCCTTCTGCAACCGCTTCTCCTGCCCATCGCTGGTTTTGGGGTAGGCTCTTTGTCTGCCTGAGGCCCCGCACTCGCAGGGCAAGAAGCTTAAAGGAATCCAACTCCAAACTCCTCCGAAGTTAAATATTGACCAGAACCTCTTTCAACAGGCCGCGGTTGCCAGGAACCGTGGAGGGCCAACTCCTCCCAACCGCCCTGGTGCAAAGTCCCACGCGGCGAAGAGTTTTGGAGCAGCGCTTACCTAGAAAGATGTTTAAATTCTGAACCAGGAATTGTCTCCAACTCCAGGCGCTCAGGGAATCGCCTTTTCCGGTGTCCAGGCGCTCTGCAGACAAATAAACAGCAGAAGGTGAATGGCGGCTGCGAGGGAAGGGAGTTGGAGGCCGGGAGTGGGAAGCGAGGCTCATGCGGGCGCCAAGGTGGCCCTGGGGGTGACGCGAACATCAGGGAGTCACCAGGGCACTCGTCCGTGTGGCGCACTCATTGCTCGAAATGTTCCAGTCTACAAATGGTCCGAAGATGGTGATTTATTTTTGTAAAATAAATACATACTCCATCTCCACACCCATACTTTCTCCTTTTTCTTTCTTTTTTTTGGCGGGGGAGTGGGGAAGGAAAGGACATGAAGCAAACAGAGGAAGCTGAGAAGGTGGAAGTGGCTTTGCTGGTGGTGTGGGCTGCTTTCAGAGAGCTCTCTCCTCAGGCACCACAACTTGGAGAATGTGAATGCTTGCTTTATTTTCCTTTCCTAACAAAAGGAAGCCTTGTCTGGGAGCATTCAATCACGGACTCTCCTGAAACCTCACTAATATGTGTTCATTTCTGTAGGCGCGAAATCAGACCCGGGTTCATTCCACTGGCCAGAGGCAGTCTTGGGAGGATTTGTGTTCTGGTTTATTCAACTCTGGGTGCGTTCCTTTTAGGTCCTAGTGGGCTGGCGGGGCTACCGCAGCACCTAGTCCCTCAGAGCAGGCCAGCTAAGGCTGCTGGAAACTGAGAGGGACGCCGGCTGGTACAATACCTGCTCAGGGGCCCTGCTCCTGCCTGGCCTTGCGCAACG</dnaseq>|
 
sequence = <dnaseq>ATATTGCAGAGCAACTTGAAAGGGGGAGCTGGCCGCGTAGGAGGTGAGAGCCAGCCGCAAAAATCCGTTCGGCGGCATTTTCTCTTCAAACCCGCCCGGTCGGATGTGGCATTTGAAGAAAGAAGGCGTGGGTCAATAATCAACCCGCACTTTCTCCTCCAAACTGCTGACGCGACTCTCACCGCCTTCTCAGCTAAGCCAGCTGCCGGGAAGGCCAGCTCTCCGTAAGAACCTGCCAGGGGAAGGGATTCTCTGGGCCAAGGGGACCGAGGGCTCCCGAGCAAGGGCTGGGGCGCCCTGAAAGCATACCTTTCCACTGGCGCCAAGACCCTGCCGGGCAAAACGCGGGGACCAGACCTGAGGAGCCGTGGGAGCCCAGGGAGATCTGGGGCGGGAGCTTCGTTCCGGCCAGGGCCTCTATCCGCCCCGATACGTGGCTCCTGGGCCGCGGGCCTCAGCGGGCAGAAGTGGGGCTCCGACCTCAAGATGAAGGTCCAGCGTCCTGGCATGCAGATGGTCGGTGCCCCAGCCTCAAGCCGCTCTGCTTAAATCCAAAGGACTGGCTTTGGAGCAAGCGTAGGCGAGATTATTTTAAAATAATAATTTATGCTGGCGGAAGGTTTTTATTTGTTGGTTTGCTATTGGTGTTTTGTTTTTTAAGCGAAAATGCCGATTGTTGATTTCCACCTCCAGAAATTACCAGCCGCCGCCGCTGCGCCCTTTCTAGACAAATCCCACAGCAGTTCACCCGGCTCCCCCAAAACCGCAGAGCTTTTCTTTACTGAGAGGACCCCTTGGTTCCACCAATTCCCCCAAATCCCCGTGGCTCCCGATCTCTCATCCAGGGGGACTAGAAGAAAAGATTTTCTCAGCACTAGAAGAATACTTGGAGCAGCAAAGGTGCCCGTGGTGTCTTTCTACCATTCAAGGGGTGTCCTCCTGAAGGCGTCTGAGAGGGCCTCTGGCGGTTCCAAGGCTGTGCAGCCGGGGAGGAAGGAAAAGGAAACGCCAAGACATAGAAAACCACGCTTTTCCCGTAGGAAGAACCGATGATGAGCCCTGATGAAAGAAGGAAGAAGACCCGCTGTCTGCGAAGGCCTAAAGGTTAGAAATACAGCAATTTTTCTCATGCCGAAGGAAAGGCAAAATGGTCTAAGAAACTGCAAGAGTGTGATACAAGTTTTCCTCAACAGCGAGCTGGGACTGGCGACAATTTCTTAACTCACAGCCTCCGCAGTCGCCTTAGTCGACAAAGAGAGCAGCCCACGCAGCGGCCGCCGCGCCCGTGCCCGTGGCCTTTACTTGCTTTTGCCCTGAAGTTCAGTGTAGTGGTTTGTTTGGGGCTTGCAGGAAGAAACAAACACACTCCCTCTGACTCTCCACAACCCATCTTTGCCTTCTGCAACCGCTTCTCCTGCCCATCGCTGGTTTTGGGGTAGGCTCTTTGTCTGCCTGAGGCCCCGCACTCGCAGGGCAAGAAGCTTAAAGGAATCCAACTCCAAACTCCTCCGAAGTTAAATATTGACCAGAACCTCTTTCAACAGGCCGCGGTTGCCAGGAACCGTGGAGGGCCAACTCCTCCCAACCGCCCTGGTGCAAAGTCCCACGCGGCGAAGAGTTTTGGAGCAGCGCTTACCTAGAAAGATGTTTAAATTCTGAACCAGGAATTGTCTCCAACTCCAGGCGCTCAGGGAATCGCCTTTTCCGGTGTCCAGGCGCTCTGCAGACAAATAAACAGCAGAAGGTGAATGGCGGCTGCGAGGGAAGGGAGTTGGAGGCCGGGAGTGGGAAGCGAGGCTCATGCGGGCGCCAAGGTGGCCCTGGGGGTGACGCGAACATCAGGGAGTCACCAGGGCACTCGTCCGTGTGGCGCACTCATTGCTCGAAATGTTCCAGTCTACAAATGGTCCGAAGATGGTGATTTATTTTTGTAAAATAAATACATACTCCATCTCCACACCCATACTTTCTCCTTTTTCTTTCTTTTTTTTGGCGGGGGAGTGGGGAAGGAAAGGACATGAAGCAAACAGAGGAAGCTGAGAAGGTGGAAGTGGCTTTGCTGGTGGTGTGGGCTGCTTTCAGAGAGCTCTCTCCTCAGGCACCACAACTTGGAGAATGTGAATGCTTGCTTTATTTTCCTTTCCTAACAAAAGGAAGCCTTGTCTGGGAGCATTCAATCACGGACTCTCCTGAAACCTCACTAATATGTGTTCATTTCTGTAGGCGCGAAATCAGACCCGGGTTCATTCCACTGGCCAGAGGCAGTCTTGGGAGGATTTGTGTTCTGGTTTATTCAACTCTGGGTGCGTTCCTTTTAGGTCCTAGTGGGCTGGCGGGGCTACCGCAGCACCTAGTCCCTCAGAGCAGGCCAGCTAAGGCTGCTGGAAACTGAGAGGGACGCCGGCTGGTACAATACCTGCTCAGGGGCCCTGCTCCTGCCTGGCCTTGCGCAACG</dnaseq>|
 
}}
 
}}
[[Category:Antisense]][[Category:ENSG00000253552.3]][[Category:lnc-EVX1-10]]
+
[[Category:Antisense]][[Category:ENSG00000253552.3]][[Category:lnc-EVX1-10]][[Category:Transcripts]]

Latest revision as of 16:53, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000517635.2

Source

Gencode19

Same with

lnc-EVX1-10:3

Classification

antisense

Length

2455 nt

Genomic location

chr7+:27154967..27162996

Exon number

2

Exons

27154967..27155962,27161538..27162996

Genome context

Sequence
000001 ATATTGCAGA GCAACTTGAA AGGGGGAGCT GGCCGCGTAG GAGGTGAGAG CCAGCCGCAA AAATCCGTTC GGCGGCATTT 000080
000081 TCTCTTCAAA CCCGCCCGGT CGGATGTGGC ATTTGAAGAA AGAAGGCGTG GGTCAATAAT CAACCCGCAC TTTCTCCTCC 000160
000161 AAACTGCTGA CGCGACTCTC ACCGCCTTCT CAGCTAAGCC AGCTGCCGGG AAGGCCAGCT CTCCGTAAGA ACCTGCCAGG 000240
000241 GGAAGGGATT CTCTGGGCCA AGGGGACCGA GGGCTCCCGA GCAAGGGCTG GGGCGCCCTG AAAGCATACC TTTCCACTGG 000320
000321 CGCCAAGACC CTGCCGGGCA AAACGCGGGG ACCAGACCTG AGGAGCCGTG GGAGCCCAGG GAGATCTGGG GCGGGAGCTT 000400
000401 CGTTCCGGCC AGGGCCTCTA TCCGCCCCGA TACGTGGCTC CTGGGCCGCG GGCCTCAGCG GGCAGAAGTG GGGCTCCGAC 000480
000481 CTCAAGATGA AGGTCCAGCG TCCTGGCATG CAGATGGTCG GTGCCCCAGC CTCAAGCCGC TCTGCTTAAA TCCAAAGGAC 000560
000561 TGGCTTTGGA GCAAGCGTAG GCGAGATTAT TTTAAAATAA TAATTTATGC TGGCGGAAGG TTTTTATTTG TTGGTTTGCT 000640
000641 ATTGGTGTTT TGTTTTTTAA GCGAAAATGC CGATTGTTGA TTTCCACCTC CAGAAATTAC CAGCCGCCGC CGCTGCGCCC 000720
000721 TTTCTAGACA AATCCCACAG CAGTTCACCC GGCTCCCCCA AAACCGCAGA GCTTTTCTTT ACTGAGAGGA CCCCTTGGTT 000800
000801 CCACCAATTC CCCCAAATCC CCGTGGCTCC CGATCTCTCA TCCAGGGGGA CTAGAAGAAA AGATTTTCTC AGCACTAGAA 000880
000881 GAATACTTGG AGCAGCAAAG GTGCCCGTGG TGTCTTTCTA CCATTCAAGG GGTGTCCTCC TGAAGGCGTC TGAGAGGGCC 000960
000961 TCTGGCGGTT CCAAGGCTGT GCAGCCGGGG AGGAAGGAAA AGGAAACGCC AAGACATAGA AAACCACGCT TTTCCCGTAG 001040
001041 GAAGAACCGA TGATGAGCCC TGATGAAAGA AGGAAGAAGA CCCGCTGTCT GCGAAGGCCT AAAGGTTAGA AATACAGCAA 001120
001121 TTTTTCTCAT GCCGAAGGAA AGGCAAAATG GTCTAAGAAA CTGCAAGAGT GTGATACAAG TTTTCCTCAA CAGCGAGCTG 001200
001201 GGACTGGCGA CAATTTCTTA ACTCACAGCC TCCGCAGTCG CCTTAGTCGA CAAAGAGAGC AGCCCACGCA GCGGCCGCCG 001280
001281 CGCCCGTGCC CGTGGCCTTT ACTTGCTTTT GCCCTGAAGT TCAGTGTAGT GGTTTGTTTG GGGCTTGCAG GAAGAAACAA 001360
001361 ACACACTCCC TCTGACTCTC CACAACCCAT CTTTGCCTTC TGCAACCGCT TCTCCTGCCC ATCGCTGGTT TTGGGGTAGG 001440
001441 CTCTTTGTCT GCCTGAGGCC CCGCACTCGC AGGGCAAGAA GCTTAAAGGA ATCCAACTCC AAACTCCTCC GAAGTTAAAT 001520
001521 ATTGACCAGA ACCTCTTTCA ACAGGCCGCG GTTGCCAGGA ACCGTGGAGG GCCAACTCCT CCCAACCGCC CTGGTGCAAA 001600
001601 GTCCCACGCG GCGAAGAGTT TTGGAGCAGC GCTTACCTAG AAAGATGTTT AAATTCTGAA CCAGGAATTG TCTCCAACTC 001680
001681 CAGGCGCTCA GGGAATCGCC TTTTCCGGTG TCCAGGCGCT CTGCAGACAA ATAAACAGCA GAAGGTGAAT GGCGGCTGCG 001760
001761 AGGGAAGGGA GTTGGAGGCC GGGAGTGGGA AGCGAGGCTC ATGCGGGCGC CAAGGTGGCC CTGGGGGTGA CGCGAACATC 001840
001841 AGGGAGTCAC CAGGGCACTC GTCCGTGTGG CGCACTCATT GCTCGAAATG TTCCAGTCTA CAAATGGTCC GAAGATGGTG 001920
001921 ATTTATTTTT GTAAAATAAA TACATACTCC ATCTCCACAC CCATACTTTC TCCTTTTTCT TTCTTTT