Difference between revisions of "NONHSAT067280"
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[[Category:Antisense]] | [[Category:Antisense]] | ||
− | [[Category:Sense]][[Category:NONHSAG026280]] | + | [[Category:Sense]][[Category:NONHSAG026280]][[Category:Transcripts]] |
Latest revision as of 23:01, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067280 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
563 nt |
Genomic location |
chr19-:50412434..50432761 |
Exon number |
4 |
Exons |
50412434..50412535,50414362..50414488,50430951..50431105,50432583..50432761 |
Genome context |
|
Sequence |
000001 GATTCCCCGC TCGCGACTCC CCACCCCCCA GGGCTCCCTA AAGAGGGCCA CGAGCTGCGA AAGGGCGGGA AAGGCAGTTG 000080
000081 GAGAAGAGGT AAGCGGTTAC TCACTCCATG GCTGCAGCAA GGAGAGGCGG CGGCGGCCTC GGCTGAAGAA AGAAGGTGGG 000160 000161 AGCGGAGAGC GCAGGCGTGC CGAGGTGGAT GTCCGTCTTT TCTCTGTTGC AGAAACCCAC CTTGTCCCAT CCACATCAGG 000240 000241 ACATCCCAGC TGGAGTTCAA CCTTCATCCC TTCTGTGGCA GTTAGGAGAC TGAATCAAGG TCCAGAGAAG GTGGAGGAAT 000320 000321 CCTGATACTG AGCGTCAGTC AAATCCGTCT TCTAAGGATA CTGCTGATCA TCTTTAGggc tcacgcctgt agtcctggca 000400 000401 ctttgagagg acaaagaggg aggatcgctt gagcccagga gttgaagacc agggcaacag aGGAATTCAG CCCAGCCCAC 000480 000481 GGCACCTGCC ACGTTGCCCT TCACTCCGGC CACGCCAGCA GCCACCACAG CAGGTGCCAC ACAGCCAGCT GCTCCCACAC 000560 000561 CCA |
Predicted Small Protein
Name | NONHSAT067280_smProtein_188:292 |
Length | 35 |
Molecular weight | 3728.2344 |
Aromaticity | 0.0588235294118 |
Instability index | 63.5941176471 |
Isoelectric point | 5.96075439453 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0110934463876 |
Amino acid sequence | MSVFSLLQKPTLSHPHQDIPAGVQPSSLLWQLGD |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLLLHHHHHHLLL |
PRMN | - |
PiMo | - |