Difference between revisions of "NONHSAT067280"

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[[Category:Antisense]]
 
[[Category:Antisense]]
[[Category:Sense]][[Category:NONHSAG026280]]
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[[Category:Sense]][[Category:NONHSAG026280]][[Category:Transcripts]]

Latest revision as of 23:01, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT067280

Source

NONCODE4.0

Same with

,

Classification

antisense,sense

Length

563 nt

Genomic location

chr19-:50412434..50432761

Exon number

4

Exons

50412434..50412535,50414362..50414488,50430951..50431105,50432583..50432761

Genome context

Sequence
000001 GATTCCCCGC TCGCGACTCC CCACCCCCCA GGGCTCCCTA AAGAGGGCCA CGAGCTGCGA AAGGGCGGGA AAGGCAGTTG 000080
000081 GAGAAGAGGT AAGCGGTTAC TCACTCCATG GCTGCAGCAA GGAGAGGCGG CGGCGGCCTC GGCTGAAGAA AGAAGGTGGG 000160
000161 AGCGGAGAGC GCAGGCGTGC CGAGGTGGAT GTCCGTCTTT TCTCTGTTGC AGAAACCCAC CTTGTCCCAT CCACATCAGG 000240
000241 ACATCCCAGC TGGAGTTCAA CCTTCATCCC TTCTGTGGCA GTTAGGAGAC TGAATCAAGG TCCAGAGAAG GTGGAGGAAT 000320
000321 CCTGATACTG AGCGTCAGTC AAATCCGTCT TCTAAGGATA CTGCTGATCA TCTTTAGggc tcacgcctgt agtcctggca 000400
000401 ctttgagagg acaaagaggg aggatcgctt gagcccagga gttgaagacc agggcaacag aGGAATTCAG CCCAGCCCAC 000480
000481 GGCACCTGCC ACGTTGCCCT TCACTCCGGC CACGCCAGCA GCCACCACAG CAGGTGCCAC ACAGCCAGCT GCTCCCACAC 000560
000561 CCA
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Predicted Small Protein

Name NONHSAT067280_smProtein_188:292
Length 35
Molecular weight 3728.2344
Aromaticity 0.0588235294118
Instability index 63.5941176471
Isoelectric point 5.96075439453
Runs 5
Runs residual 0.0390915860015
Runs probability 0.0110934463876
Amino acid sequence MSVFSLLQKPTLSHPHQDIPAGVQPSSLLWQLGD
Secondary structure LLEELLLLLLLLLLLLLLLLLLLLLHHHHHHLLL
PRMN -
PiMo -