Difference between revisions of "NONHSAT037439"

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sequence = <dnaseq>TCGGTTGCCCGGCCGGGGACCCGAGCCGAAAAGTTATCGTCAGAATGTCGGGCAAAGACCGAATTGAAATCTTTCCCTCGCGAATGGCACAGACCATCATGAAGGCTCGTTTAAAGGGAGCACAGACAGGTCGAAACCTCCTGAAGAAAAAATCTGATGCCTTAACTCTTCGATTTCGACAGATCCTAAAGAAGATAATAGAGGTAGAATGAACTTTTCTTAGAATAGTATTTATTTTAGAAAAATCCAGCATGGCCCTTGGCATTTTTTTTTTTGTTGTTGTTATTTTAATTAATTTTTTTCTTTCAAAAGTAAAAATACCATTATAAGTTTAACAAGTGTCAAATATCAAATAGTTCATTTaataaaatccaaactctttaatcttgcctgca</dnaseq>|
 
sequence = <dnaseq>TCGGTTGCCCGGCCGGGGACCCGAGCCGAAAAGTTATCGTCAGAATGTCGGGCAAAGACCGAATTGAAATCTTTCCCTCGCGAATGGCACAGACCATCATGAAGGCTCGTTTAAAGGGAGCACAGACAGGTCGAAACCTCCTGAAGAAAAAATCTGATGCCTTAACTCTTCGATTTCGACAGATCCTAAAGAAGATAATAGAGGTAGAATGAACTTTTCTTAGAATAGTATTTATTTTAGAAAAATCCAGCATGGCCCTTGGCATTTTTTTTTTTGTTGTTGTTATTTTAATTAATTTTTTTCTTTCAAAAGTAAAAATACCATTATAAGTTTAACAAGTGTCAAATATCAAATAGTTCATTTaataaaatccaaactctttaatcttgcctgca</dnaseq>|
 
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[[Category:Sense]][[Category:NONHSAG015270]]
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[[Category:Sense]][[Category:NONHSAG015270]][[Category:Transcripts]]

Latest revision as of 21:40, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT037439

Source

NONCODE4.0

Same with

,

Classification

sense

Length

395 nt

Genomic location

chr14-:67819448..67826459

Exon number

2

Exons

67819448..67819757,67826375..67826459

Genome context

Sequence
000001 TCGGTTGCCC GGCCGGGGAC CCGAGCCGAA AAGTTATCGT CAGAATGTCG GGCAAAGACC GAATTGAAAT CTTTCCCTCG 000080
000081 CGAATGGCAC AGACCATCAT GAAGGCTCGT TTAAAGGGAG CACAGACAGG TCGAAACCTC CTGAAGAAAA AATCTGATGC 000160
000161 CTTAACTCTT CGATTTCGAC AGATCCTAAA GAAGATAATA GAGGTAGAAT GAACTTTTCT TAGAATAGTA TTTATTTTAG 000240
000241 AAAAATCCAG CATGGCCCTT GGCATTTTTT TTTTTGTTGT TGTTATTTTA ATTAATTTTT TTCTTTCAAA AGTAAAAATA 000320
000321 CCATTATAAG TTTAACAAGT GTCAAATATC AAATAGTTCA TTTaataaaa tccaaactct ttaatcttgc ctgca
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Predicted Small Protein

Name NONHSAT037439_smProtein_44:211
Length 56
Molecular weight 6358.597
Aromaticity 0.0363636363636
Instability index 49.0654545455
Isoelectric point 11.0687866211
Runs 9
Runs residual 0.0121212121212
Runs probability 0.0367720661839
Amino acid sequence MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIEVE
Secondary structure LLLLLEEEELLHHHHHHHHHHHHHLLLLHHHHHHLLLLHHHHHHHHHHHHHHHLL
PRMN -
PiMo -