Difference between revisions of "NONHSAT037439"
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sequence = <dnaseq>TCGGTTGCCCGGCCGGGGACCCGAGCCGAAAAGTTATCGTCAGAATGTCGGGCAAAGACCGAATTGAAATCTTTCCCTCGCGAATGGCACAGACCATCATGAAGGCTCGTTTAAAGGGAGCACAGACAGGTCGAAACCTCCTGAAGAAAAAATCTGATGCCTTAACTCTTCGATTTCGACAGATCCTAAAGAAGATAATAGAGGTAGAATGAACTTTTCTTAGAATAGTATTTATTTTAGAAAAATCCAGCATGGCCCTTGGCATTTTTTTTTTTGTTGTTGTTATTTTAATTAATTTTTTTCTTTCAAAAGTAAAAATACCATTATAAGTTTAACAAGTGTCAAATATCAAATAGTTCATTTaataaaatccaaactctttaatcttgcctgca</dnaseq>| | sequence = <dnaseq>TCGGTTGCCCGGCCGGGGACCCGAGCCGAAAAGTTATCGTCAGAATGTCGGGCAAAGACCGAATTGAAATCTTTCCCTCGCGAATGGCACAGACCATCATGAAGGCTCGTTTAAAGGGAGCACAGACAGGTCGAAACCTCCTGAAGAAAAAATCTGATGCCTTAACTCTTCGATTTCGACAGATCCTAAAGAAGATAATAGAGGTAGAATGAACTTTTCTTAGAATAGTATTTATTTTAGAAAAATCCAGCATGGCCCTTGGCATTTTTTTTTTTGTTGTTGTTATTTTAATTAATTTTTTTCTTTCAAAAGTAAAAATACCATTATAAGTTTAACAAGTGTCAAATATCAAATAGTTCATTTaataaaatccaaactctttaatcttgcctgca</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG015270]] | + | [[Category:Sense]][[Category:NONHSAG015270]][[Category:Transcripts]] |
Latest revision as of 21:40, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037439 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
395 nt |
Genomic location |
chr14-:67819448..67826459 |
Exon number |
2 |
Exons |
67819448..67819757,67826375..67826459 |
Genome context |
|
Sequence |
000001 TCGGTTGCCC GGCCGGGGAC CCGAGCCGAA AAGTTATCGT CAGAATGTCG GGCAAAGACC GAATTGAAAT CTTTCCCTCG 000080
000081 CGAATGGCAC AGACCATCAT GAAGGCTCGT TTAAAGGGAG CACAGACAGG TCGAAACCTC CTGAAGAAAA AATCTGATGC 000160 000161 CTTAACTCTT CGATTTCGAC AGATCCTAAA GAAGATAATA GAGGTAGAAT GAACTTTTCT TAGAATAGTA TTTATTTTAG 000240 000241 AAAAATCCAG CATGGCCCTT GGCATTTTTT TTTTTGTTGT TGTTATTTTA ATTAATTTTT TTCTTTCAAA AGTAAAAATA 000320 000321 CCATTATAAG TTTAACAAGT GTCAAATATC AAATAGTTCA TTTaataaaa tccaaactct ttaatcttgc ctgca |
Predicted Small Protein
Name | NONHSAT037439_smProtein_44:211 |
Length | 56 |
Molecular weight | 6358.597 |
Aromaticity | 0.0363636363636 |
Instability index | 49.0654545455 |
Isoelectric point | 11.0687866211 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.0367720661839 |
Amino acid sequence | MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIEVE |
Secondary structure | LLLLLEEEELLHHHHHHHHHHHHHLLLLHHHHHHLLLLHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |