Difference between revisions of "NONHSAT113586"
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sequence = <dnaseq>GTCTGTGGGAATTATTTCCTCCCATTGGTATTAGATTATATTTTTCCAAGTCAACTCTTCCTGGCTGCCCTTCAAGGTTCTAAAGATTTTCTACTGTTGTAGTGTAACTAGTAAGAGGCAAAACCATGAGAATCAGAGAGAACTTCCCTTCATGATGCTATGCAATCCCCAGGAGAAGCACGTTGAAAGCTGAAAAGAAGACTGACTGAGATGTGTTGGCGGGCTTCTCAAGATCCCTATCGATGGCAGAATGCTGACATGAGTTGCCCATAGTCCAGGTTTCCCAATGTAGCAGATGACTCTAGCGGCTCCAGCTTCAGCATCATCTTAAGTTCAAGTGAAAAGGAAAAGAGAATCTCTTTTTCTTCAAACAATTTCAAACTAAAATCTTGAGTCTGACTTTTCCTGGCCAGAATTAAGCTTGTACTTATCCCTGAAAAATCATCAATGCTACAGTGATGAATTTACCAATTGAGGCAGAATTTAGGTCACATGACGCTCCAAAGCCTCTTCAAAACCGCATGACTCAGAGTGAGGCAGAAGTATTTGGGATATTTGCAACAGGAGAAGGGTAAATGAATGGAGAGTGCCAAAACAACTTATGTCAATTATACAATTATAAATACAACCAAAATAAAGTATGGAAATCAGTATTTTCACCTATCTTAAAAAAAAAA</dnaseq>| | sequence = <dnaseq>GTCTGTGGGAATTATTTCCTCCCATTGGTATTAGATTATATTTTTCCAAGTCAACTCTTCCTGGCTGCCCTTCAAGGTTCTAAAGATTTTCTACTGTTGTAGTGTAACTAGTAAGAGGCAAAACCATGAGAATCAGAGAGAACTTCCCTTCATGATGCTATGCAATCCCCAGGAGAAGCACGTTGAAAGCTGAAAAGAAGACTGACTGAGATGTGTTGGCGGGCTTCTCAAGATCCCTATCGATGGCAGAATGCTGACATGAGTTGCCCATAGTCCAGGTTTCCCAATGTAGCAGATGACTCTAGCGGCTCCAGCTTCAGCATCATCTTAAGTTCAAGTGAAAAGGAAAAGAGAATCTCTTTTTCTTCAAACAATTTCAAACTAAAATCTTGAGTCTGACTTTTCCTGGCCAGAATTAAGCTTGTACTTATCCCTGAAAAATCATCAATGCTACAGTGATGAATTTACCAATTGAGGCAGAATTTAGGTCACATGACGCTCCAAAGCCTCTTCAAAACCGCATGACTCAGAGTGAGGCAGAAGTATTTGGGATATTTGCAACAGGAGAAGGGTAAATGAATGGAGAGTGCCAAAACAACTTATGTCAATTATACAATTATAAATACAACCAAAATAAAGTATGGAAATCAGTATTTTCACCTATCTTAAAAAAAAAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG044140]] | + | [[Category:Intergenic]][[Category:NONHSAG044140]][[Category:Transcripts]] |
Latest revision as of 01:55, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113586 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
677 nt |
Genomic location |
chr6+:74779167..75400443 |
Exon number |
4 |
Exons |
74779167..74779304,75056791..75056845,75383780..75383864,75400053..75400443 |
Genome context |
|
Sequence |
000001 GTCTGTGGGA ATTATTTCCT CCCATTGGTA TTAGATTATA TTTTTCCAAG TCAACTCTTC CTGGCTGCCC TTCAAGGTTC 000080
000081 TAAAGATTTT CTACTGTTGT AGTGTAACTA GTAAGAGGCA AAACCATGAG AATCAGAGAG AACTTCCCTT CATGATGCTA 000160 000161 TGCAATCCCC AGGAGAAGCA CGTTGAAAGC TGAAAAGAAG ACTGACTGAG ATGTGTTGGC GGGCTTCTCA AGATCCCTAT 000240 000241 CGATGGCAGA ATGCTGACAT GAGTTGCCCA TAGTCCAGGT TTCCCAATGT AGCAGATGAC TCTAGCGGCT CCAGCTTCAG 000320 000321 CATCATCTTA AGTTCAAGTG AAAAGGAAAA GAGAATCTCT TTTTCTTCAA ACAATTTCAA ACTAAAATCT TGAGTCTGAC 000400 000401 TTTTCCTGGC CAGAATTAAG CTTGTACTTA TCCCTGAAAA ATCATCAATG CTACAGTGAT GAATTTACCA ATTGAGGCAG 000480 000481 AATTTAGGTC ACATGACGCT CCAAAGCCTC TTCAAAACCG CATGACTCAG AGTGAGGCAG AAGTATTTGG GATATTTGCA 000560 000561 ACAGGAGAAG GGTAAATGAA TGGAGAGTGC CAAAACAACT TATGTCAATT ATACAATTAT AAATACAACC AAAATAAAGT 000640 000641 ATGGAAATCA GTATTTTCAC CTATCTTAAA AAAAAAA |
Predicted Small Protein
Name | NONHSAT113586_smProtein_458:574 |
Length | 39 |
Molecular weight | 4219.6676 |
Aromaticity | 0.0789473684211 |
Instability index | 57.0315789474 |
Isoelectric point | 4.69805908203 |
Runs | 8 |
Runs residual | 0.0379155124654 |
Runs probability | 0.0317965023847 |
Amino acid sequence | MNLPIEAEFRSHDAPKPLQNRMTQSEAEVFGIFATGEG |
Secondary structure | LLLLEEEEEELLLLLLHHHLLLLLLHHHEEEEEELLLL |
PRMN | - |
PiMo | - |