Difference between revisions of "NONHSAT068183"

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sequence = <dnaseq>AGTCAGTGCGGCGCCAGCTCTGCAGAGCCCAGACAGGGTCCGGTTGGGGAGGtgctgggattacagatgtgagccaccgtgcccagcccagagttcttttatcctctagaaaattcttcattccatagagctttttcatattattagcttaattatgcataatgttttataattaaaaatttctctttattttgttctatcccctgtttcctgtaaactgctgtttgtggtttactcgttattagatttgtcaaaggtttatctagcttactattgtttttccaaagaaccaacattaggattcatttatatccattatttcttttatttgtaatttgtttttctttgatatgtattgcatttattttttattgtttttcttctttgtctcagtttttatactgaatacttgatttatattctctttatattttctATAATAGCATACTTATTAACGCAAATGTACTTCTGGATATAGCGTTGGCCACATCTTAACATTTGATTATTCATTTTTGTTTATGTTGTCTAAAAATTACATTGTAGTGTGTCTAAATATTACATTGTAGTGTTTCTAAAGAGTGCTTTGAAACTCAGTGATTTGGTTTATTTTTTGTTTAAAAATAGTTttgttttcttgttttactgcactgtgaacacagaatgtggcctataacacatctgcttccaaaactttttaaaaagcttttagtgtggcctagaacatgtccattttttgtaattgtttcacgaacatttaagatgaagatatcttctctgtctgtagaactgaaaactttatgtgcctgttagttaactcagtatcgtcaattatattgttcagattcatgtgttatctaattttggcctattatattcattaaaaaccaataaggttatgtgaaactttgttagtacaattgtttttgctaataaatttttataatctttgctttatgtactcaacagctgtgtaattcgaggcatataagtgcagcattgttatgtccttgttaattaaataatatatgtaaaacaccatatgacaatggctggcagatagtaggcactcaataaatgttaattaAAACCTG</dnaseq>|
 
sequence = <dnaseq>AGTCAGTGCGGCGCCAGCTCTGCAGAGCCCAGACAGGGTCCGGTTGGGGAGGtgctgggattacagatgtgagccaccgtgcccagcccagagttcttttatcctctagaaaattcttcattccatagagctttttcatattattagcttaattatgcataatgttttataattaaaaatttctctttattttgttctatcccctgtttcctgtaaactgctgtttgtggtttactcgttattagatttgtcaaaggtttatctagcttactattgtttttccaaagaaccaacattaggattcatttatatccattatttcttttatttgtaatttgtttttctttgatatgtattgcatttattttttattgtttttcttctttgtctcagtttttatactgaatacttgatttatattctctttatattttctATAATAGCATACTTATTAACGCAAATGTACTTCTGGATATAGCGTTGGCCACATCTTAACATTTGATTATTCATTTTTGTTTATGTTGTCTAAAAATTACATTGTAGTGTGTCTAAATATTACATTGTAGTGTTTCTAAAGAGTGCTTTGAAACTCAGTGATTTGGTTTATTTTTTGTTTAAAAATAGTTttgttttcttgttttactgcactgtgaacacagaatgtggcctataacacatctgcttccaaaactttttaaaaagcttttagtgtggcctagaacatgtccattttttgtaattgtttcacgaacatttaagatgaagatatcttctctgtctgtagaactgaaaactttatgtgcctgttagttaactcagtatcgtcaattatattgttcagattcatgtgttatctaattttggcctattatattcattaaaaaccaataaggttatgtgaaactttgttagtacaattgtttttgctaataaatttttataatctttgctttatgtactcaacagctgtgtaattcgaggcatataagtgcagcattgttatgtccttgttaattaaataatatatgtaaaacaccatatgacaatggctggcagatagtaggcactcaataaatgttaattaAAACCTG</dnaseq>|
 
}}
 
}}
[[Category:Sense]][[Category:NONHSAG026642]]
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[[Category:Sense]][[Category:NONHSAG026642]][[Category:Transcripts]]

Latest revision as of 23:07, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT068183

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1091 nt

Genomic location

chr19+:57154527..57168614

Exon number

2

Exons

57154527..57154578,57167576..57168614

Genome context

Sequence
000001 AGTCAGTGCG GCGCCAGCTC TGCAGAGCCC AGACAGGGTC CGGTTGGGGA GGtgctggga ttacagatgt gagccaccgt 000080
000081 gcccagccca gagttctttt atcctctaga aaattcttca ttccatagag ctttttcata ttattagctt aattatgcat 000160
000161 aatgttttat aattaaaaat ttctctttat tttgttctat cccctgtttc ctgtaaactg ctgtttgtgg tttactcgtt 000240
000241 attagatttg tcaaaggttt atctagctta ctattgtttt tccaaagaac caacattagg attcatttat atccattatt 000320
000321 tcttttattt gtaatttgtt tttctttgat atgtattgca tttatttttt attgtttttc ttctttgtct cagtttttat 000400
000401 actgaatact tgatttatat tctctttata ttttctATAA TAGCATACTT ATTAACGCAA ATGTACTTCT GGATATAGCG 000480
000481 TTGGCCACAT CTTAACATTT GATTATTCAT TTTTGTTTAT GTTGTCTAAA AATTACATTG TAGTGTGTCT AAATATTACA 000560
000561 TTGTAGTGTT TCTAAAGAGT GCTTTGAAAC TCAGTGATTT GGTTTATTTT TTGTTTAAAA ATAGTTttgt tttcttgttt 000640
000641 tactgcactg tgaacacaga atgtggccta taacacatct gcttccaaaa ctttttaaaa agcttttagt gtggcctaga 000720
000721 acatgtccat tttttgtaat tgtttcacga acatttaaga tgaagatatc ttctctgtct gtagaactga aaactttatg 000800
000801 tgcctgttag ttaactcagt atcgtcaatt atattgttca gattcatgtg ttatctaatt ttggcctatt atattcatta 000880
000881 aaaaccaata aggttatgtg aaactttgtt agtacaattg tttttgctaa taaattttta taatctttgc tttatgtact 000960
000961 caacagctgt gtaattcgag gcatataagt gcagcattgt tatgtccttg ttaattaaat aatatatgta aaacaccata 001040
001041 tgacaatggc tggcagatag taggcactca ataaatgtta attaAAACCT G
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Predicted Small Protein

Name NONHSAT068183_smProtein_797:880
Length 28
Molecular weight 3226.9781
Aromaticity 0.185185185185
Instability index 47.3037037037
Isoelectric point 7.82342529297
Runs 5
Runs residual 0.0214707461084
Runs probability 0.00429252782193
Amino acid sequence MCLLVNSVSSIILFRFMCYLILAYYIH
Secondary structure LEEEELLHHHHHHHHHHHHHHHHHHHL
PRMN LLHHHHHHHHHHHHHHHHHHHHHHLLL
PiMo i??????????????????????????