Difference between revisions of "NONHSAT091028"

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sequence = <dnaseq>ACCCACGCGGCGCAGCTCCCAAAGTTGCAGACAGCCCGGCGAACCGCGCAATGCGCTTCTTCTGCCTGCAGCAGAGAAAAGGAAAGAAAACTCCGCAGGGGCTCCGTTGGCTTCTCCACGAGTGACAACCATGTTTTCCCAGATAGAAGACCGGAGCCCTGCTCCTTTGCGATCCGCCGAGGGCTGCAGAGAGCATCCTCATCCATTTGGGCACCCCTGCCCAGGAAGAGCCCGGCCATCCCTTTCCGGACTGGATCCTTAAGAGGTGAATTTTCTTCCGTGGATTCCGATTTGCTCCGTCTGACCAGCCTAGGCAATCCAGCATCGCGTGGTACCAGTGCCGCTGGGCACACTGGCTTCACGCCGGCTCCGCCTCACCAGCAAGCGCATTCCCAGGTGGTCAGGCTCAGGATGGACCATGAGCTTTCAAAAAGGAAAAAGGTGGAAATCCTCAACTATGCTGCCATCTGAATAAGTGTTTCTTTGTAGATGCACAGAGTCAAGGAAAATTACATCCCTGCATTATGTAATGTACCAACAACGCACTTACCCACTGTTTTAATCTAGGTTATTCTTGAAAGCAGAGCCTGAGACAAAGGTAGACACATTCTATTTATGAGTCTAACACCCAGGAGCAGGAATGAGAGATAGGGGAGTGAACTGGGGAAAAGGGAAACTAAGTCCGAGCAAAACCAGATACTGCTCTTATCAAGTGGTCCACCCCTATTAATGGCTACATAATGCAGAACTTTCTCAGGATTCTTCTTAAACTTTATCTCAGAACTGTCTGCCTCAGGGAGAAAGGAGAAGTATTTCTCCATCAGCAGCCACCTCCTGTGTGTTGAGGGCTGCTCCTTTGGGGCATTAACCCACTGCCTCCACCACCCCAACCCTCTGGGCTGCAAAGAGCTAGCTGACAGTCCAGCTGGTACCTTAGCATCACACATTGCTGCATCAGAGAGGTCTTAAGACAGGAAGCTAGAGTCTTGGTGCATGCTCGAAGTGAGACGGTGTCAGCACAGAGCAGGGTAAAATCTTCCCGTTAACTCTTCACCAGAGCTATGACTGGAATCAGAGGTTGAAAAGATGTGAGACTGTACCCAAGAAGCATCTTATAAGCCTACGTAATATACTGTTAGACTCATCGAAATCTATTTCCTCCCTTCTTTATAATCAAAACTTCAGTGTCCAGAATAAAGTTGGCAGAAGGGTTAAATTGGAAAGTTAAATGTACTAGAAGGTGTACATTTATAAGTTTTGACCTTGAGTCGTGTTCAAGGAGAAAGTGACATTGGAACTTGGAAAATTTAAAAATGATTCTACTTGAAAAATTTGACCATTGCATAGAAATATTAGCTATCGTCTAATCTTTTGTAATCTTAGAAACAATCGTGAATTGTTTGGTGAAAAATGAAAAAATAACCATTTCTTATGTCTCCGTGACCTTTATAGACCAATGTCACCAACTTTTCCTAAGGTAATTGTTTCCTACTGTCAAATAGCTCTAGTGATATAAATCTTAACAATCAATGAAGGGAAAACTGGTGGAAACATAGGAGGAAAAATACTGGGATAATTTTCATCACAAAGTATTGGCATTAACATTGGTTAGAATAGGGGAGAAACTGCATGACTTGACAACTGGACATTCCTGTATGTTGTATGAGGCCCTGTCTTAACAGAAATAGTGATGTCATCATCATCCTCTCTTATTTGGTCTTGAATTGCCACCAATCGGATAAAACCTTTGAATTATTTAACTCAATATATGTTAAGTTTCTACTATGTGCTGTGTATTGGTACTATAAATATGAATAAGACATAAGATATTACATTCAAAAACATCAGAATACATGTTCTTTTAAAGTATACCCCAAAACATTTACCATGTGTTCTGGGGCGCATGTTAGGCTGGATCACAAATCAAGTCTCAAGAATTTCAAAAGATTGAAATCATATAGAGTATGAATTAAACCAGAAATCAAGTACATAAAGGTAACAAAAAATTTCCAAAATGCATTAATTTAAGGAACATACACCTCATGACCCATGAGCCAAAAAATAAATCACGGCAAAATTGCAAAAATATTTTGAAATGAATTTTAAAGAAAATACTTAGCATATTAAATACTTAGCATATTAAAGCTCTAAGTACATATGTTAGAAATTTTACCGAAAGGTTGGCTATCAGTGTTTCCAGAAGCCAGGGAAAAAGTTTATACAATTTGATCGCTGAGGCAGGGAAACAAAGTGAGACCTCCGATCGCCCTGCCTTTCTGAGGTGAGCACTCTGGATCCCATCGCAGGAGATCAGAGTCTTGCTGAGTTGAGGAGAGGAAGATTGGAGTTGATACTGAGATAGCTTGAATTTTCAGGACAAAGTATCAACAAGGAGGAAGGTAGACAAAAAAATCCAGAAATCTATGTAGAGACCCCATTGTGTACATTGCGGAACACTAAGCCTAACAATTCTCAAAATTAGCGTGAGATTGGGAAATATCTAATTTCCATCCAGCCACAGTGGAGAGTCCTGACTGAAAACCAGGCATTCGCTAAAGATCCCAGAAAGGTTGTGTGTTACATACGTAGGGCTAAACTATCCTGACTAAAAACTACACTACACTTGCTCCTCACCCCCACAAAAAGCTTAAAAACAAGCCTCAATAGTATAAAGCTGATCTGTAAGTAACTAAACTACCTGCAGAACAAAGTCCAAATTTATTAGTTCCAGTACTCCAAAAAAAACACATGTAAAAAAAAAATAGATTTACAAGACATTTATTTGGGGAAAAAAAGAATGCCTGAGGGTTGAAATGGAGAGGAAGCCAGAGAGACAGAGTCCTCAGAATACATAAAATTTCTGGCCTCCATGGAGGTGTGATGGTTAATTTTATGCATGTCAACTTCGCTGGGCCACAGGATGCCCCATATATGATCGAACATTATTTCTGGTTGTGTTCATGAAGCTTTTTCTGGAGGAAATTCGCATTTGAATTGATGGACTGAATAAAGCAGATTGCAGTCCCCAGTGTGGATGGGCTTGATCCAGTCTTCTAAGGACCCAAATAAAATAGGTGGAGGAAGCTTGAATTTTCTGCCTGACTGTGGCGCTGGGACACCCATCTTCTCCTGCCCTTGAACTGGGACTGACACCATCAGTGCTCCTGGTTCTCAGACCTTCGGACAGCAGACTTGGGGCCTTCTCGGCCTCCATTATTGTGTAAGCCAATTCCTTATAATAAATAAGGGTTTATTTATTG</dnaseq>|
 
sequence = <dnaseq>ACCCACGCGGCGCAGCTCCCAAAGTTGCAGACAGCCCGGCGAACCGCGCAATGCGCTTCTTCTGCCTGCAGCAGAGAAAAGGAAAGAAAACTCCGCAGGGGCTCCGTTGGCTTCTCCACGAGTGACAACCATGTTTTCCCAGATAGAAGACCGGAGCCCTGCTCCTTTGCGATCCGCCGAGGGCTGCAGAGAGCATCCTCATCCATTTGGGCACCCCTGCCCAGGAAGAGCCCGGCCATCCCTTTCCGGACTGGATCCTTAAGAGGTGAATTTTCTTCCGTGGATTCCGATTTGCTCCGTCTGACCAGCCTAGGCAATCCAGCATCGCGTGGTACCAGTGCCGCTGGGCACACTGGCTTCACGCCGGCTCCGCCTCACCAGCAAGCGCATTCCCAGGTGGTCAGGCTCAGGATGGACCATGAGCTTTCAAAAAGGAAAAAGGTGGAAATCCTCAACTATGCTGCCATCTGAATAAGTGTTTCTTTGTAGATGCACAGAGTCAAGGAAAATTACATCCCTGCATTATGTAATGTACCAACAACGCACTTACCCACTGTTTTAATCTAGGTTATTCTTGAAAGCAGAGCCTGAGACAAAGGTAGACACATTCTATTTATGAGTCTAACACCCAGGAGCAGGAATGAGAGATAGGGGAGTGAACTGGGGAAAAGGGAAACTAAGTCCGAGCAAAACCAGATACTGCTCTTATCAAGTGGTCCACCCCTATTAATGGCTACATAATGCAGAACTTTCTCAGGATTCTTCTTAAACTTTATCTCAGAACTGTCTGCCTCAGGGAGAAAGGAGAAGTATTTCTCCATCAGCAGCCACCTCCTGTGTGTTGAGGGCTGCTCCTTTGGGGCATTAACCCACTGCCTCCACCACCCCAACCCTCTGGGCTGCAAAGAGCTAGCTGACAGTCCAGCTGGTACCTTAGCATCACACATTGCTGCATCAGAGAGGTCTTAAGACAGGAAGCTAGAGTCTTGGTGCATGCTCGAAGTGAGACGGTGTCAGCACAGAGCAGGGTAAAATCTTCCCGTTAACTCTTCACCAGAGCTATGACTGGAATCAGAGGTTGAAAAGATGTGAGACTGTACCCAAGAAGCATCTTATAAGCCTACGTAATATACTGTTAGACTCATCGAAATCTATTTCCTCCCTTCTTTATAATCAAAACTTCAGTGTCCAGAATAAAGTTGGCAGAAGGGTTAAATTGGAAAGTTAAATGTACTAGAAGGTGTACATTTATAAGTTTTGACCTTGAGTCGTGTTCAAGGAGAAAGTGACATTGGAACTTGGAAAATTTAAAAATGATTCTACTTGAAAAATTTGACCATTGCATAGAAATATTAGCTATCGTCTAATCTTTTGTAATCTTAGAAACAATCGTGAATTGTTTGGTGAAAAATGAAAAAATAACCATTTCTTATGTCTCCGTGACCTTTATAGACCAATGTCACCAACTTTTCCTAAGGTAATTGTTTCCTACTGTCAAATAGCTCTAGTGATATAAATCTTAACAATCAATGAAGGGAAAACTGGTGGAAACATAGGAGGAAAAATACTGGGATAATTTTCATCACAAAGTATTGGCATTAACATTGGTTAGAATAGGGGAGAAACTGCATGACTTGACAACTGGACATTCCTGTATGTTGTATGAGGCCCTGTCTTAACAGAAATAGTGATGTCATCATCATCCTCTCTTATTTGGTCTTGAATTGCCACCAATCGGATAAAACCTTTGAATTATTTAACTCAATATATGTTAAGTTTCTACTATGTGCTGTGTATTGGTACTATAAATATGAATAAGACATAAGATATTACATTCAAAAACATCAGAATACATGTTCTTTTAAAGTATACCCCAAAACATTTACCATGTGTTCTGGGGCGCATGTTAGGCTGGATCACAAATCAAGTCTCAAGAATTTCAAAAGATTGAAATCATATAGAGTATGAATTAAACCAGAAATCAAGTACATAAAGGTAACAAAAAATTTCCAAAATGCATTAATTTAAGGAACATACACCTCATGACCCATGAGCCAAAAAATAAATCACGGCAAAATTGCAAAAATATTTTGAAATGAATTTTAAAGAAAATACTTAGCATATTAAATACTTAGCATATTAAAGCTCTAAGTACATATGTTAGAAATTTTACCGAAAGGTTGGCTATCAGTGTTTCCAGAAGCCAGGGAAAAAGTTTATACAATTTGATCGCTGAGGCAGGGAAACAAAGTGAGACCTCCGATCGCCCTGCCTTTCTGAGGTGAGCACTCTGGATCCCATCGCAGGAGATCAGAGTCTTGCTGAGTTGAGGAGAGGAAGATTGGAGTTGATACTGAGATAGCTTGAATTTTCAGGACAAAGTATCAACAAGGAGGAAGGTAGACAAAAAAATCCAGAAATCTATGTAGAGACCCCATTGTGTACATTGCGGAACACTAAGCCTAACAATTCTCAAAATTAGCGTGAGATTGGGAAATATCTAATTTCCATCCAGCCACAGTGGAGAGTCCTGACTGAAAACCAGGCATTCGCTAAAGATCCCAGAAAGGTTGTGTGTTACATACGTAGGGCTAAACTATCCTGACTAAAAACTACACTACACTTGCTCCTCACCCCCACAAAAAGCTTAAAAACAAGCCTCAATAGTATAAAGCTGATCTGTAAGTAACTAAACTACCTGCAGAACAAAGTCCAAATTTATTAGTTCCAGTACTCCAAAAAAAACACATGTAAAAAAAAAATAGATTTACAAGACATTTATTTGGGGAAAAAAAGAATGCCTGAGGGTTGAAATGGAGAGGAAGCCAGAGAGACAGAGTCCTCAGAATACATAAAATTTCTGGCCTCCATGGAGGTGTGATGGTTAATTTTATGCATGTCAACTTCGCTGGGCCACAGGATGCCCCATATATGATCGAACATTATTTCTGGTTGTGTTCATGAAGCTTTTTCTGGAGGAAATTCGCATTTGAATTGATGGACTGAATAAAGCAGATTGCAGTCCCCAGTGTGGATGGGCTTGATCCAGTCTTCTAAGGACCCAAATAAAATAGGTGGAGGAAGCTTGAATTTTCTGCCTGACTGTGGCGCTGGGACACCCATCTTCTCCTGCCCTTGAACTGGGACTGACACCATCAGTGCTCCTGGTTCTCAGACCTTCGGACAGCAGACTTGGGGCCTTCTCGGCCTCCATTATTGTGTAAGCCAATTCCTTATAATAAATAAGGGTTTATTTATTG</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG035674]]
+
[[Category:Intergenic]][[Category:NONHSAG035674]][[Category:Transcripts]]

Latest revision as of 00:37, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT091028

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3260 nt

Genomic location

chr3+:106959539..106967719

Exon number

2

Exons

106959539..106959934,106964855..106967719

Genome context

Sequence
000001 ACCCACGCGG CGCAGCTCCC AAAGTTGCAG ACAGCCCGGC GAACCGCGCA ATGCGCTTCT TCTGCCTGCA GCAGAGAAAA 000080
000081 GGAAAGAAAA CTCCGCAGGG GCTCCGTTGG CTTCTCCACG AGTGACAACC ATGTTTTCCC AGATAGAAGA CCGGAGCCCT 000160
000161 GCTCCTTTGC GATCCGCCGA GGGCTGCAGA GAGCATCCTC ATCCATTTGG GCACCCCTGC CCAGGAAGAG CCCGGCCATC 000240
000241 CCTTTCCGGA CTGGATCCTT AAGAGGTGAA TTTTCTTCCG TGGATTCCGA TTTGCTCCGT CTGACCAGCC TAGGCAATCC 000320
000321 AGCATCGCGT GGTACCAGTG CCGCTGGGCA CACTGGCTTC ACGCCGGCTC CGCCTCACCA GCAAGCGCAT TCCCAGGTGG 000400
000401 TCAGGCTCAG GATGGACCAT GAGCTTTCAA AAAGGAAAAA GGTGGAAATC CTCAACTATG CTGCCATCTG AATAAGTGTT 000480
000481 TCTTTGTAGA TGCACAGAGT CAAGGAAAAT TACATCCCTG CATTATGTAA TGTACCAACA ACGCACTTAC CCACTGTTTT 000560
000561 AATCTAGGTT ATTCTTGAAA GCAGAGCCTG AGACAAAGGT AGACACATTC TATTTATGAG TCTAACACCC AGGAGCAGGA 000640
000641 ATGAGAGATA GGGGAGTGAA CTGGGGAAAA GGGAAACTAA GTCCGAGCAA AACCAGATAC TGCTCTTATC AAGTGGTCCA 000720
000721 CCCCTATTAA TGGCTACATA ATGCAGAACT TTCTCAGGAT TCTTCTTAAA CTTTATCTCA GAACTGTCTG CCTCAGGGAG 000800
000801 AAAGGAGAAG TATTTCTCCA TCAGCAGCCA CCTCCTGTGT GTTGAGGGCT GCTCCTTTGG GGCATTAACC CACTGCCTCC 000880
000881 ACCACCCCAA CCCTCTGGGC TGCAAAGAGC TAGCTGACAG TCCAGCTGGT ACCTTAGCAT CACACATTGC TGCATCAGAG 000960
000961 AGGTCTTAAG ACAGGAAGCT AGAGTCTTGG TGCATGCTCG AAGTGAGACG GTGTCAGCAC AGAGCAGGGT AAAATCTTCC 001040
001041 CGTTAACTCT TCACCAGAGC TATGACTGGA ATCAGAGGTT GAAAAGATGT GAGACTGTAC CCAAGAAGCA TCTTATAAGC 001120
001121 CTACGTAATA TACTGTTAGA CTCATCGAAA TCTATTTCCT CCCTTCTTTA TAATCAAAAC TTCAGTGTCC AGAATAAAGT 001200
001201 TGGCAGAAGG GTTAAATTGG AAAGTTAAAT GTACTAGAAG GTGTACATTT ATAAGTTTTG ACCTTGAGTC GTGTTCAAGG 001280
001281 AGAAAGTGAC ATTGGAACTT GGAAAATTTA AAAATGATTC TACTTGAAAA ATTTGACCAT TGCATAGAAA TATTAGCTAT 001360
001361 CGTCTAATCT TTTGTAATCT TAGAAACAAT CGTGAATTGT TTGGTGAAAA ATGAAAAAAT AACCATTTCT TATGTCTCCG 001440
001441 TGACCTTTAT AGACCAATGT CACCAACTTT TCCTAAGGTA ATTGTTTCCT ACTGTCAAAT AGCTCTAGTG ATATAAATCT 001520
001521 TAACAATCAA TGAAGGGAAA ACTGGTGGAA ACATAGGAGG AAAAATACTG GGATAATTTT CATCACAAAG TATTGGCATT 001600
001601 AACATTGGTT AGAATAGGGG AGAAACTGCA TGACTTGACA ACTGGACATT CCTGTATGTT GTATGAGGCC CTGTCTTAAC 001680
001681 AGAAATAGTG ATGTCATCAT CATCCTCTCT TATTTGGTCT TGAATTGCCA CCAATCGGAT AAAACCTTTG AATTATTTAA 001760
001761 CTCAATATAT GTTAAGTTTC TACTATGTGC TGTGTATTGG TACTATAAAT ATGAATAAGA CATAAGATAT TACATTCAAA 001840
001841 AACATCAGAA TACATGTTCT TTTAAAGTAT ACCCCAAAAC ATTTACCATG TGTTCTGGGG CGCATGTTAG GCTGGATCAC 001920
001921 AAATCAAGTC TCAAGAATTT CAAAAGATTG AAATCATATA GAGTATGAAT TAAACCAGAA ATCAAGTACA TAAAGGTAAC 002000
002001 AAAAAATTTC CAAAATGCAT TAATTTAAGG AACATACACC TCATGACCCA TGAGCCAAAA AATAAATCAC GGCAAAATTG 002080
002081 CAAAAATATT TTGAAATGAA TTTTAAAGAA AATACTTAGC ATATTAAATA CTTAGCATAT TAAAGCTCTA AGTACATATG 002160
002161 TTAGAAATTT TACCGAAAGG TTGGCTATCA GTGTTTCCAG AAGCCAGGGA AAAAGTTTAT ACAATTTGAT CGCTGAGGCA 002240
002241 GGGAAACAAA GTGAGACCTC CGATCGCCCT GCCTTTCTGA GGTGAGCACT CTGGATCCCA TCGCAGGAGA TCAGAGTCTT 002320
002321 GCTGAGTTGA GGAGAGGAAG ATTGGAGTTG ATACTGAGAT AGCTTGAATT TTCAGGACAA AGTATCAACA AGGAGGAAGG 002400
002401 TAGACAAAAA AATCCAGAAA TCTATGTAGA GACCCCATTG TGTACATTGC GGAACACTAA GCCTAACAAT TCTCAAAATT 002480
002481 AGCGTGAGAT TGGGAAATAT CTAATTTCCA TCCAGCCACA GTGGAGAGTC CTGACTGAAA ACCAGGCATT CGCTAAAGAT 002560
002561 CCCAGAAAGG TTGTGTGTTA CATACGTAGG GCTAAACTAT CCTGACTAAA AACTACACTA CACTTGCTCC TCACCCCCAC 002640
002641 AAAAAGCTTA AAAACAAGCC TCAATAGTAT AAAGCTGATC TGTAAGTAAC TAAACTACCT GCAGAACAAA GTCCAAATTT 002720
002721 ATTAGTTCCA GTACTCCAAA AAAAACACAT GTAAAAAAAA AATAGATTTA CAAGACATTT ATTTGGGGAA AAAAAGAATG 002800
002801 CCTGAGGGTT GAAATGGAGA GGAAGCCAGA GAGACAGAGT CCTCAGAATA CATAAAATTT CTGGCCTCCA TGGAGGTGTG 002880
002881 ATGGTTAATT TTATGCATGT CAACTTCGCT GGGCCACAGG ATGCCCCATA TATGATCGAA CATTATTTCT GGTTGTGTTC 002960
002961 ATGAAGCTTT TTCTGGAGGA AATTCGCATT TGAATTGATG GACTGAATAA AGCAGATTGC AGTCCCCAGT GTGGATGGGC 003040
003041 TTGATCCAGT CTTCTAAGGA CCCAAATAAA ATAGGTGGAG GAAGCTTGAA TTTTCTGCCT GACTGTGGCG CTGGGACACC 003120
003121 CATCTTCTCC TGCCCTTGAA CTGGGACTGA CACCATCAGT GCTCCTGGTT CTCAGACCTT CGGACAGCAG ACTTGGGGCC 003200
003201 TTCTCGGCCT CCATTATTGT GTAAGCCAAT TCCTTATAAT AAATAAGGGT TTATTTATTG
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