Difference between revisions of "ENST00000527128.1"

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sequence = <dnaseq>AGAAGTTTCCCCCTTGGGCGGTGGCGGAGCTGATAAGCGCGCTAGTAGCAGCTCTGGCAGAAGCAACGGTGGCTTCGAGGGATGGCGGCGGCTGCAACAGGACCTGCAGCATCCCAGAGGAACTGACTAAGGCTTTGGAACAGAAACCAGATGATGCACAATATTATCGTCAAAGAGCTTATTGTCACATTCTTCTTGGGAATTACTGTGGTGCAGATGCTAATTTCAGTGACTGGATTAAAAGGTGTCGAAGCTCAGAATGGCTCGGAATCTGAGGTGTTTGTGGAGAATTATGAGACCCTCGTGTTTTACTGGCCCTCGCTGCTGTGCCTTGCCTTCCTGCTGGGCCGCTTCCTGCATATGTTTGTCAAGGCTCTGAGGGTGCACCTCGGCTGGGAGCTCCAGGTGGAAGAAAAATCTGTCCTGGAAGTGCACCAGGGAGAGCACGTCAAGCAGCTCCTGAGGATACCCCGCCCTCAAGAGAAAAAAAAGTCTTGGTTCCAAACCAGGATATATGAGTGGGATCCCTGCTTTCAATTTCCAAGCAGAATGATTGGAACCATTGTGTTGGCATTCATCTGCCTGTATCTTTTCATTGTCATCGAGTTCTGCGTGTTTGTGTACGTGAGAGATGAGTTGGATGTGCTTGAAAACAACCTGGAAAGCTACATCACCTTCACGAACCATTCAGGGGTCCTGACCCCAGTCATCCTGCAGGTGAAAGAGCTGATCAGTGTCACCAAAGGAGTCTGGGTGGCGACCATTTTGCCCGCGTATCTCACGTGTGTGAGCTATCTGTTCCACATTTTGGTCTGTTACAGAAAGCACATGAAGAGGCTATGGGCAGGAGATAAACATTTTCTTCCTTTGAAGTTCCATAACCCGGCCTCGTCGGAGAGCATGGTGGCCATTGCAAGGTACTCTGGCTGGCAAATAGCCTATATTCTGTGGGGCTACCTCATCATTCACATGGTACAGAGCCTATGTGGCATGGCAATCATGTACAGCCTGGTGCTACCCATCGTCCAAACCAGGGCCTGGAAATGCTGCAAGGGCTGGGCATTGGGATGTAAGTGCTGGGCGGGTATCCTGTCATTGACATGTTCTGAGAGCTGGGGTCCCCCCAACTGCTATGTGGACCCATGGTCTTGGCCCTGACCCAGAGATGGGCCATGATAGTAACTCATGGTGGGGGGAAACAGCGTTCACAAAAGGCTGCCTCTCACACCATTCCACAATGCCCTCACAACCATGTATGGGGTGGGGGATACATATGTCCATTTTCCAGCTGGGAAAATTGAGGTTTAGGAAAGTAAAATGAGAGGCAAGACAGTATGATGGAAGGAAGCAGGGAATCCTGGCAAAGCTTTTGGATCTGCTGTGTGACCTGGGGTAAGTTATTCCACTTCTCTGCACCTCAGTTTACATATCTGGAAGACAAAGTAATGTTGGCTTCATTGAGCATTTAGTATGCATCTTTTCTCATAATAGCCTATGAACTTGGTGCTTGTGTTACCTTCCATTTTGCAGACCAGGGAACAGAGGCACAGAGAGACTGAGCGTTTCCTCCAAGCA</dnaseq>|
 
sequence = <dnaseq>AGAAGTTTCCCCCTTGGGCGGTGGCGGAGCTGATAAGCGCGCTAGTAGCAGCTCTGGCAGAAGCAACGGTGGCTTCGAGGGATGGCGGCGGCTGCAACAGGACCTGCAGCATCCCAGAGGAACTGACTAAGGCTTTGGAACAGAAACCAGATGATGCACAATATTATCGTCAAAGAGCTTATTGTCACATTCTTCTTGGGAATTACTGTGGTGCAGATGCTAATTTCAGTGACTGGATTAAAAGGTGTCGAAGCTCAGAATGGCTCGGAATCTGAGGTGTTTGTGGAGAATTATGAGACCCTCGTGTTTTACTGGCCCTCGCTGCTGTGCCTTGCCTTCCTGCTGGGCCGCTTCCTGCATATGTTTGTCAAGGCTCTGAGGGTGCACCTCGGCTGGGAGCTCCAGGTGGAAGAAAAATCTGTCCTGGAAGTGCACCAGGGAGAGCACGTCAAGCAGCTCCTGAGGATACCCCGCCCTCAAGAGAAAAAAAAGTCTTGGTTCCAAACCAGGATATATGAGTGGGATCCCTGCTTTCAATTTCCAAGCAGAATGATTGGAACCATTGTGTTGGCATTCATCTGCCTGTATCTTTTCATTGTCATCGAGTTCTGCGTGTTTGTGTACGTGAGAGATGAGTTGGATGTGCTTGAAAACAACCTGGAAAGCTACATCACCTTCACGAACCATTCAGGGGTCCTGACCCCAGTCATCCTGCAGGTGAAAGAGCTGATCAGTGTCACCAAAGGAGTCTGGGTGGCGACCATTTTGCCCGCGTATCTCACGTGTGTGAGCTATCTGTTCCACATTTTGGTCTGTTACAGAAAGCACATGAAGAGGCTATGGGCAGGAGATAAACATTTTCTTCCTTTGAAGTTCCATAACCCGGCCTCGTCGGAGAGCATGGTGGCCATTGCAAGGTACTCTGGCTGGCAAATAGCCTATATTCTGTGGGGCTACCTCATCATTCACATGGTACAGAGCCTATGTGGCATGGCAATCATGTACAGCCTGGTGCTACCCATCGTCCAAACCAGGGCCTGGAAATGCTGCAAGGGCTGGGCATTGGGATGTAAGTGCTGGGCGGGTATCCTGTCATTGACATGTTCTGAGAGCTGGGGTCCCCCCAACTGCTATGTGGACCCATGGTCTTGGCCCTGACCCAGAGATGGGCCATGATAGTAACTCATGGTGGGGGGAAACAGCGTTCACAAAAGGCTGCCTCTCACACCATTCCACAATGCCCTCACAACCATGTATGGGGTGGGGGATACATATGTCCATTTTCCAGCTGGGAAAATTGAGGTTTAGGAAAGTAAAATGAGAGGCAAGACAGTATGATGGAAGGAAGCAGGGAATCCTGGCAAAGCTTTTGGATCTGCTGTGTGACCTGGGGTAAGTTATTCCACTTCTCTGCACCTCAGTTTACATATCTGGAAGACAAAGTAATGTTGGCTTCATTGAGCATTTAGTATGCATCTTTTCTCATAATAGCCTATGAACTTGGTGCTTGTGTTACCTTCCATTTTGCAGACCAGGGAACAGAGGCACAGAGAGACTGAGCGTTTCCTCCAAGCA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000254876.1]]
+
[[Category:Intergenic]][[Category:ENSG00000254876.1]][[Category:lnc-TDRD7-1]]

Revision as of 11:55, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000527128.1

Source

Gencode19

Same with

lnc-TDRD7-1:1

Classification

intergenic

Length

1575 nt

Genomic location

chr9+:100000731..100054275

Exon number

12

Exons

100000731..100000849,100008378..100008468,100013074..100013125,100013823..100013839,100038851..100038979,100039838..100039908,100041644..100041755,100043798..100043951,100049942..100050017,100052866..100052947,100053136..100053184,100053653..100054275

Genome context

Sequence
000001 AGAAGTTTCC CCCTTGGGCG GTGGCGGAGC TGATAAGCGC GCTAGTAGCA GCTCTGGCAG AAGCAACGGT GGCTTCGAGG 000080
000081 GATGGCGGCG GCTGCAACAG GACCTGCAGC ATCCCAGAGG AACTGACTAA GGCTTTGGAA CAGAAACCAG ATGATGCACA 000160
000161 ATATTATCGT CAAAGAGCTT ATTGTCACAT TCTTCTTGGG AATTACTGTG GTGCAGATGC TAATTTCAGT GACTGGATTA 000240
000241 AAAGGTGTCG AAGCTCAGAA TGGCTCGGAA TCTGAGGTGT TTGTGGAGAA TTATGAGACC CTCGTGTTTT ACTGGCCCTC 000320
000321 GCTGCTGTGC CTTGCCTTCC TGCTGGGCCG CTTCCTGCAT ATGTTTGTCA AGGCTCTGAG GGTGCACCTC GGCTGGGAGC 000400
000401 TCCAGGTGGA AGAAAAATCT GTCCTGGAAG TGCACCAGGG AGAGCACGTC AAGCAGCTCC TGAGGATACC CCGCCCTCAA 000480
000481 GAGAAAAAAA AGTCTTGGTT CCAAACCAGG ATATATGAGT GGGATCCCTG CTTTCAATTT CCAAGCAGAA TGATTGGAAC 000560
000561 CATTGTGTTG GCATTCATCT GCCTGTATCT TTTCATTGTC ATCGAGTTCT GCGTGTTTGT GTACGTGAGA GATGAGTTGG 000640
000641 ATGTGCTTGA AAACAACCTG GAAAGCTACA TCACCTTCAC GAACCATTCA GGGGTCCTGA CCCCAGTCAT CCTGCAGGTG 000720
000721 AAAGAGCTGA TCAGTGTCAC CAAAGGAGTC TGGGTGGCGA CCATTTTGCC CGCGTATCTC ACGTGTGTGA GCTATCTGTT 000800
000801 CCACATTTTG GTCTGTTACA GAAAGCACAT GAAGAGGCTA TGGGCAGGAG ATAAACATTT TCTTCCTTTG AAGTTCCATA 000880
000881 ACCCGGCCTC GTCGGAGAGC ATGGTGGCCA TTGCAAGGTA CTCTGGCTGG CAAATAGCCT ATATTCTGTG GGGCTACCTC 000960
000961 ATCATTCACA TGGTACAGAG CCTATGTGGC ATGGCAATCA TGTACAGCCT GGTGCTACCC ATCGTCCAAA CCAGGGCCTG 001040
001041 GAAATGCTGC AAGGGCTGGG CATTGGGATG TAAGTGCTGG GCGGGTATCC TGTCATTGAC ATGTTCTGAG AGCTGGGGTC 001120
001121 CCCCCAACTG CTATGTGGAC CCATGGTCTT GGCCCTGACC CAGAGATGGG CCATGATAGT AACTCATGGT GGGGGGAAAC 001200
001201 AGCGTTCACA AAAGGCTGCC TCTCACACCA TTCCACAATG CCCTCACAAC CATGTATGGG GTGGGGGATA CATATGTCCA 001280
001281 TTTTCCAGCT GGGAAAATTG AGGTTTAGGA AAGTAAAATG AGAGGCAAGA CAGTATGATG GAAGGAAGCA GGGAATCCTG 001360
001361 GCAAAGCTTT TGGATCTGCT GTGTGACCTG GGGTAAGTTA TTCCACTTCT CTGCACCTCA GTTTACATAT CTGGAAGACA 001440
001441 AAGTAATGTT GGCTTCATTG AGCATTTAGT ATGCATCTTT TCTCATAATA GCCTATGAAC TTGGTGCTTG TGTTACCTTC 001520
001521 CATTTTGCAG ACCAGGGAAC AGAGGCACAG AGAGACTGAG CGTTTCCTCC AAGCA
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