Difference between revisions of "Lnc-ING1-1:3"

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sequence = <dnaseq>GGAAAAGGGTGAATCCAATGCAGGCTGATTTCTGGCTTACATCACAGTCCAGTCTGATTTTCTGCAGATTACTTTCTACAAGACGATTTGGGACCTCAGTTTACCACCTCCCAGCGGACCGACGGGTGCGGTGAGTGGAGATGATTTTGTGAGAGTTTTTAGGACAATCCTGGAAGTGGGTTTGTCACTTCTGGCTGCACTCCATTGGCCTGAAAGGAATCACACGGCCCCACCCCAATGCGGGAGGCTGGGAGTGTTCAGCGCCTGCAGAGAAGGTCAGGTGGGCTGGAAGCCCTGCGCCAGGCATGGCCACGCCCTGGTGAAGGTGCTCGACAAATGTGAACATCTCCACCTAAGCCCCCCTTGGCACCACCACTGAGTCAGTCTGTGTTTTGGATGTTTAATTTTGGGGTTCAATTTGCTGATGGTGAATTTGACAATGATGTTATTGATTAATTCATTTAAAGGGAGGAGAATCACAAATATTGTGGCTAGTACAGAACAACCTCTTCCACCAAGCCAGTTGTGACTGTTGCGGATGGAGATGGACACCTAGTGAATGATTTAATCCACCAACAATTGTGGCACACAGGCATCGTCTTCCCCACGCCAGGACTCAGAGGCTGAGCCCAGGGTGCTGAGAGGCTGAGCCCACAGCTCCGGGGTGAGGAATGGAGCTCCCCGAGCGCGGCTTATCTTTCAAGGGAGCTCACACTCTTTTACAACAACCCTCGAGTTTGCAATAGTTTCAAAGTAACCCCTTCCACAGACACAAATTGTTCATTAGTTATAAATAGAACAACAGTAACTTTACAGTGGAAAAAGCTGGCGGACATCATTTTAGCCACATAATCAAAGTTAACGTCAACAGTAAGGAGAAAATCAACACCACGTGTCTTCTGACAACAACGCGCTGATGGGAGCCCAACATCATTTACACCATAAATCAAATGTTTATCCGTTGGCGATTCCAGCCAAAAATAGATAACCTGATCCAATCATGAGGGAACTTCAGACAAACCCAAACTGAAGGACATTCTACAGAATAACTGGTCTGTACTCATAACAAAGAATCAATGTCATGAGGGACCATGAAAGGCTGAGGATGTCCCACAGGTTGAAAGTGACGAAAACAAACAAAAAACAACCAGCAACCAACTACGATGCACAACCTTGGATTGGAGCCTTCTCAAAATTGCTGAAAATAACAGTGGAACAAGTGGTGAAATTTGAATATGGGCTATATGTTAGGTATTCATTTTATGTCAATGTTAAATTTTCCGACATTGATATTTGTACCAGGAAATGTAAAAGAAGGCCCAAATTTAGCGATAAATTATGCCTGCCACTCACTCTCTCCAATGATTCAGAAGATAGTACGGATGATGAACAGATGACAGAGACATGGTAGGTAGATCAATAGATGGATGGATAGATAGAAAATATGAAATAAGAAACTCCTGGACACGAACCGTACAGACCAAGTTCATCACTCCTGTGAGGGAGAACCTTGAATTCCCATAAGAAAAACTGAATGTGCAGGAAGCGTATCTCATTCAGTTCACAAACCATGATGGGTTCTGTGTTCACCCTGGCTAACTATCTACTTCTACCTCTCCTCTCCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC</dnaseq>|
 
sequence = <dnaseq>GGAAAAGGGTGAATCCAATGCAGGCTGATTTCTGGCTTACATCACAGTCCAGTCTGATTTTCTGCAGATTACTTTCTACAAGACGATTTGGGACCTCAGTTTACCACCTCCCAGCGGACCGACGGGTGCGGTGAGTGGAGATGATTTTGTGAGAGTTTTTAGGACAATCCTGGAAGTGGGTTTGTCACTTCTGGCTGCACTCCATTGGCCTGAAAGGAATCACACGGCCCCACCCCAATGCGGGAGGCTGGGAGTGTTCAGCGCCTGCAGAGAAGGTCAGGTGGGCTGGAAGCCCTGCGCCAGGCATGGCCACGCCCTGGTGAAGGTGCTCGACAAATGTGAACATCTCCACCTAAGCCCCCCTTGGCACCACCACTGAGTCAGTCTGTGTTTTGGATGTTTAATTTTGGGGTTCAATTTGCTGATGGTGAATTTGACAATGATGTTATTGATTAATTCATTTAAAGGGAGGAGAATCACAAATATTGTGGCTAGTACAGAACAACCTCTTCCACCAAGCCAGTTGTGACTGTTGCGGATGGAGATGGACACCTAGTGAATGATTTAATCCACCAACAATTGTGGCACACAGGCATCGTCTTCCCCACGCCAGGACTCAGAGGCTGAGCCCAGGGTGCTGAGAGGCTGAGCCCACAGCTCCGGGGTGAGGAATGGAGCTCCCCGAGCGCGGCTTATCTTTCAAGGGAGCTCACACTCTTTTACAACAACCCTCGAGTTTGCAATAGTTTCAAAGTAACCCCTTCCACAGACACAAATTGTTCATTAGTTATAAATAGAACAACAGTAACTTTACAGTGGAAAAAGCTGGCGGACATCATTTTAGCCACATAATCAAAGTTAACGTCAACAGTAAGGAGAAAATCAACACCACGTGTCTTCTGACAACAACGCGCTGATGGGAGCCCAACATCATTTACACCATAAATCAAATGTTTATCCGTTGGCGATTCCAGCCAAAAATAGATAACCTGATCCAATCATGAGGGAACTTCAGACAAACCCAAACTGAAGGACATTCTACAGAATAACTGGTCTGTACTCATAACAAAGAATCAATGTCATGAGGGACCATGAAAGGCTGAGGATGTCCCACAGGTTGAAAGTGACGAAAACAAACAAAAAACAACCAGCAACCAACTACGATGCACAACCTTGGATTGGAGCCTTCTCAAAATTGCTGAAAATAACAGTGGAACAAGTGGTGAAATTTGAATATGGGCTATATGTTAGGTATTCATTTTATGTCAATGTTAAATTTTCCGACATTGATATTTGTACCAGGAAATGTAAAAGAAGGCCCAAATTTAGCGATAAATTATGCCTGCCACTCACTCTCTCCAATGATTCAGAAGATAGTACGGATGATGAACAGATGACAGAGACATGGTAGGTAGATCAATAGATGGATGGATAGATAGAAAATATGAAATAAGAAACTCCTGGACACGAACCGTACAGACCAAGTTCATCACTCCTGTGAGGGAGAACCTTGAATTCCCATAAGAAAAACTGAATGTGCAGGAAGCGTATCTCATTCAGTTCACAAACCATGATGGGTTCTGTGTTCACCCTGGCTAACTATCTACTTCTACCTCTCCTCTCCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-ING1-1]]
+
[[Category:Intergenic]][[Category:lnc-ING1-1]][[Category:NONHSAG014183]]

Revision as of 12:14, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-ING1-1:3

Source

LNCipedia2.1

Same with

NONHSAT035178

Classification

intergenic

Length

1667 nt

Genomic location

chr13+:111477209..111491493

Exon number

2

Exons

111477209..111477944,111490563..111491493

Genome context

Sequence
000001 GGAAAAGGGT GAATCCAATG CAGGCTGATT TCTGGCTTAC ATCACAGTCC AGTCTGATTT TCTGCAGATT ACTTTCTACA 000080
000081 AGACGATTTG GGACCTCAGT TTACCACCTC CCAGCGGACC GACGGGTGCG GTGAGTGGAG ATGATTTTGT GAGAGTTTTT 000160
000161 AGGACAATCC TGGAAGTGGG TTTGTCACTT CTGGCTGCAC TCCATTGGCC TGAAAGGAAT CACACGGCCC CACCCCAATG 000240
000241 CGGGAGGCTG GGAGTGTTCA GCGCCTGCAG AGAAGGTCAG GTGGGCTGGA AGCCCTGCGC CAGGCATGGC CACGCCCTGG 000320
000321 TGAAGGTGCT CGACAAATGT GAACATCTCC ACCTAAGCCC CCCTTGGCAC CACCACTGAG TCAGTCTGTG TTTTGGATGT 000400
000401 TTAATTTTGG GGTTCAATTT GCTGATGGTG AATTTGACAA TGATGTTATT GATTAATTCA TTTAAAGGGA GGAGAATCAC 000480
000481 AAATATTGTG GCTAGTACAG AACAACCTCT TCCACCAAGC CAGTTGTGAC TGTTGCGGAT GGAGATGGAC ACCTAGTGAA 000560
000561 TGATTTAATC CACCAACAAT TGTGGCACAC AGGCATCGTC TTCCCCACGC CAGGACTCAG AGGCTGAGCC CAGGGTGCTG 000640
000641 AGAGGCTGAG CCCACAGCTC CGGGGTGAGG AATGGAGCTC CCCGAGCGCG GCTTATCTTT CAAGGGAGCT CACACTCTTT 000720
000721 TACAACAACC CTCGAGTTTG CAATAGTTTC AAAGTAACCC CTTCCACAGA CACAAATTGT TCATTAGTTA TAAATAGAAC 000800
000801 AACAGTAACT TTACAGTGGA AAAAGCTGGC GGACATCATT TTAGCCACAT AATCAAAGTT AACGTCAACA GTAAGGAGAA 000880
000881 AATCAACACC ACGTGTCTTC TGACAACAAC GCGCTGATGG GAGCCCAACA TCATTTACAC CATAAATCAA ATGTTTATCC 000960
000961 GTTGGCGATT CCAGCCAAAA ATAGATAACC TGATCCAATC ATGAGGGAAC TTCAGACAAA CCCAAACTGA AGGACATTCT 001040
001041 ACAGAATAAC TGGTCTGTAC TCATAACAAA GAATCAATGT CATGAGGGAC CATGAAAGGC TGAGGATGTC CCACAGGTTG 001120
001121 AAAGTGACGA AAACAAACAA AAAACAACCA GCAACCAACT ACGATGCACA ACCTTGGATT GGAGCCTTCT CAAAATTGCT 001200
001201 GAAAATAACA GTGGAACAAG TGGTGAAATT TGAATATGGG CTATATGTTA GGTATTCATT TTATGTCAAT GTTAAATTTT 001280
001281 CCGACATTGA TATTTGTACC AGGAAATGTA AAAGAAGGCC CAAATTTAGC GATAAATTAT GCCTGCCACT CACTCTCTCC 001360
001361 AATGATTCAG AAGATAGTAC GGATGATGAA CAGATGACAG AGACATGGTA GGTAGATCAA TAGATGGATG GATAGATAGA 001440
001441 AAATATGAAA TAAGAAACTC CTGGACACGA ACCGTACAGA CCAAGTTCAT CACTCCTGTG AGGGAGAACC TTGAATTCCC 001520
001521 ATAAGAAAAA CTGAATGTGC AGGAAGCGTA TCTCATTCAG TTCACAAACC ATGATGGGTT CTGTGTTCAC CCTGGCTAAC 001600
001601 TATCTACTTC TACCTCTCCT CTCCTCCTCT CCTCTCCTCT CCTCTCCTCT CCTCTCCTCT CCTCTCC
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