Difference between revisions of "Lnc-NMNAT2-1:1"

From LncRNAWiki
Jump to: navigation, search
Line 42: Line 42:
 
sequence = <dnaseq>TATCACAGTCATCAAAGCAAATTTCTTAGGCTTAGAAGTTTCTCGTCTTTTAAATGGATTTGCTGTTCTTTTTTCTTTTATACAAACCAGAATGGCATTTGCTAATCATCTCACTTTCAAGCAAGTTTACATATCATAGTGTGTGTATGTATAGATTTATGTGAATTTTCTCAAATCACACAAAATTATTTTTGGCTTGCATGTTTAATTATTTGCTGGGCAAATACTTCGTATGTAAACTCTGCAAAAACATATTTCTAGGCTGAGTATAAAATTTTAGAATCAAAAGTAGGAATTTCTTCAGAGAGATGCTAAACTTGAAAAAGAATAGAAAATGTCGGAATATACTACCCAATCCCCTGCTGCTTGATCTTTGTCAGAGTGAAATCAGGATTCAGTGATGAGGACCACATCCTGTTGCCATGGAAATGATTGTGCTGTCACAAATATAGTACTATGACTTCATGGTAAAGAGGAACAGATGGTCTGGAAGAGAATGAAGGCCTAAGGTTAGCACAATTGTTTGGGGAATAAGTCATCTTAGATTCTTTTTGGAAGTAGGTAGAAGCACAAATAATAAGCAAAAATGACTTCACTGTAGCTTTGCAAAAGCCGCTGAGTAAGAAAGAGCTTAGCCAAGGAAAGAATCAACAAAGAAGCAAACCCAAGGCTGATATCCTTAGAAGAGGCTGCTTAAAGATTGACTCTTTCCTGACATCTGGGAACCTGGCTTGTGAAAAGTTCCCCAAACCAACATGAAAAGTCTCCTGTATTGATAAGGCTGTTTTGCCCTTGAGGCACTGAATTACCACTTCCTTCAGAGAGTCTGATATTTTGACAGTTTCCAGGCAGAGAATGCCTTTTAGCACTAGCCCCCAAGAAAAACCCTAAACTCTGAGTCTCAAATGGGACACACACACACACACACACACACACACACACACACACACATTGAATTCATATTGTCATTGCCAACTTTATTTAGAACCACAGGATTTATTTCAGTCTTCTCTGCTTGCTTGTTTGTAACTTTTTTCTCTGACAGTGAGAAAGCTGGCTTCCATTAACTACAATTTATTTACTTATTTGTTCAGCCTTAGTATACATGTAAAGTAGTTTCAGAACTGCTAACTTATACTCCTGCCTGAAACATAATGACCAATTAAAGAAAAGCATTTATGCACAGTTGATTTTGCTTTAGCTTTACAGTATCCAGTTAAAACACATTTCCAAAGTTACTTAGGTCAGCTCCTTTTTCCCCAACCGTTTTAGTCAGGTTATGTCATATAATTGTAACACAGATTTGTCAGTCTGCATTTCATCCTGGAATCTCCCCACATCGTGGTTGATTTTTTAAAAAAATGTACACAGTAAATTTCACTTAGGTTTATAATACATTATACCTTAGTTAGAATAAATGTACCTTTTGTGAATGTGGACAAATGCATAGAGTCATGAATCTACCACCACAGTATCTTGCAAAACTGTTCTATTACCCTAAAAATTGTCTTGTGTGATCCCTTCGCAGTCAACCTCTTC</dnaseq>|
 
sequence = <dnaseq>TATCACAGTCATCAAAGCAAATTTCTTAGGCTTAGAAGTTTCTCGTCTTTTAAATGGATTTGCTGTTCTTTTTTCTTTTATACAAACCAGAATGGCATTTGCTAATCATCTCACTTTCAAGCAAGTTTACATATCATAGTGTGTGTATGTATAGATTTATGTGAATTTTCTCAAATCACACAAAATTATTTTTGGCTTGCATGTTTAATTATTTGCTGGGCAAATACTTCGTATGTAAACTCTGCAAAAACATATTTCTAGGCTGAGTATAAAATTTTAGAATCAAAAGTAGGAATTTCTTCAGAGAGATGCTAAACTTGAAAAAGAATAGAAAATGTCGGAATATACTACCCAATCCCCTGCTGCTTGATCTTTGTCAGAGTGAAATCAGGATTCAGTGATGAGGACCACATCCTGTTGCCATGGAAATGATTGTGCTGTCACAAATATAGTACTATGACTTCATGGTAAAGAGGAACAGATGGTCTGGAAGAGAATGAAGGCCTAAGGTTAGCACAATTGTTTGGGGAATAAGTCATCTTAGATTCTTTTTGGAAGTAGGTAGAAGCACAAATAATAAGCAAAAATGACTTCACTGTAGCTTTGCAAAAGCCGCTGAGTAAGAAAGAGCTTAGCCAAGGAAAGAATCAACAAAGAAGCAAACCCAAGGCTGATATCCTTAGAAGAGGCTGCTTAAAGATTGACTCTTTCCTGACATCTGGGAACCTGGCTTGTGAAAAGTTCCCCAAACCAACATGAAAAGTCTCCTGTATTGATAAGGCTGTTTTGCCCTTGAGGCACTGAATTACCACTTCCTTCAGAGAGTCTGATATTTTGACAGTTTCCAGGCAGAGAATGCCTTTTAGCACTAGCCCCCAAGAAAAACCCTAAACTCTGAGTCTCAAATGGGACACACACACACACACACACACACACACACACACACACACATTGAATTCATATTGTCATTGCCAACTTTATTTAGAACCACAGGATTTATTTCAGTCTTCTCTGCTTGCTTGTTTGTAACTTTTTTCTCTGACAGTGAGAAAGCTGGCTTCCATTAACTACAATTTATTTACTTATTTGTTCAGCCTTAGTATACATGTAAAGTAGTTTCAGAACTGCTAACTTATACTCCTGCCTGAAACATAATGACCAATTAAAGAAAAGCATTTATGCACAGTTGATTTTGCTTTAGCTTTACAGTATCCAGTTAAAACACATTTCCAAAGTTACTTAGGTCAGCTCCTTTTTCCCCAACCGTTTTAGTCAGGTTATGTCATATAATTGTAACACAGATTTGTCAGTCTGCATTTCATCCTGGAATCTCCCCACATCGTGGTTGATTTTTTAAAAAAATGTACACAGTAAATTTCACTTAGGTTTATAATACATTATACCTTAGTTAGAATAAATGTACCTTTTGTGAATGTGGACAAATGCATAGAGTCATGAATCTACCACCACAGTATCTTGCAAAACTGTTCTATTACCCTAAAAATTGTCTTGTGTGATCCCTTCGCAGTCAACCTCTTC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-NMNAT2-1]]
+
[[Category:Intergenic]][[Category:lnc-NMNAT2-1]][[Category:NONHSAG003687]]

Revision as of 12:21, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

lnc-NMNAT2-1:1

Source

LNCipedia2.1

Same with

NONHSAT008354

Classification

intergenic

Length

1539 nt

Genomic location

chr1-:183408443..183412805

Exon number

2

Exons

183408443..183409341,183412166..183412805

Genome context

Sequence
000001 TATCACAGTC ATCAAAGCAA ATTTCTTAGG CTTAGAAGTT TCTCGTCTTT TAAATGGATT TGCTGTTCTT TTTTCTTTTA 000080
000081 TACAAACCAG AATGGCATTT GCTAATCATC TCACTTTCAA GCAAGTTTAC ATATCATAGT GTGTGTATGT ATAGATTTAT 000160
000161 GTGAATTTTC TCAAATCACA CAAAATTATT TTTGGCTTGC ATGTTTAATT ATTTGCTGGG CAAATACTTC GTATGTAAAC 000240
000241 TCTGCAAAAA CATATTTCTA GGCTGAGTAT AAAATTTTAG AATCAAAAGT AGGAATTTCT TCAGAGAGAT GCTAAACTTG 000320
000321 AAAAAGAATA GAAAATGTCG GAATATACTA CCCAATCCCC TGCTGCTTGA TCTTTGTCAG AGTGAAATCA GGATTCAGTG 000400
000401 ATGAGGACCA CATCCTGTTG CCATGGAAAT GATTGTGCTG TCACAAATAT AGTACTATGA CTTCATGGTA AAGAGGAACA 000480
000481 GATGGTCTGG AAGAGAATGA AGGCCTAAGG TTAGCACAAT TGTTTGGGGA ATAAGTCATC TTAGATTCTT TTTGGAAGTA 000560
000561 GGTAGAAGCA CAAATAATAA GCAAAAATGA CTTCACTGTA GCTTTGCAAA AGCCGCTGAG TAAGAAAGAG CTTAGCCAAG 000640
000641 GAAAGAATCA ACAAAGAAGC AAACCCAAGG CTGATATCCT TAGAAGAGGC TGCTTAAAGA TTGACTCTTT CCTGACATCT 000720
000721 GGGAACCTGG CTTGTGAAAA GTTCCCCAAA CCAACATGAA AAGTCTCCTG TATTGATAAG GCTGTTTTGC CCTTGAGGCA 000800
000801 CTGAATTACC ACTTCCTTCA GAGAGTCTGA TATTTTGACA GTTTCCAGGC AGAGAATGCC TTTTAGCACT AGCCCCCAAG 000880
000881 AAAAACCCTA AACTCTGAGT CTCAAATGGG ACACACACAC ACACACACAC ACACACACAC ACACACACAC ATTGAATTCA 000960
000961 TATTGTCATT GCCAACTTTA TTTAGAACCA CAGGATTTAT TTCAGTCTTC TCTGCTTGCT TGTTTGTAAC TTTTTTCTCT 001040
001041 GACAGTGAGA AAGCTGGCTT CCATTAACTA CAATTTATTT ACTTATTTGT TCAGCCTTAG TATACATGTA AAGTAGTTTC 001120
001121 AGAACTGCTA ACTTATACTC CTGCCTGAAA CATAATGACC AATTAAAGAA AAGCATTTAT GCACAGTTGA TTTTGCTTTA 001200
001201 GCTTTACAGT ATCCAGTTAA AACACATTTC CAAAGTTACT TAGGTCAGCT CCTTTTTCCC CAACCGTTTT AGTCAGGTTA 001280
001281 TGTCATATAA TTGTAACACA GATTTGTCAG TCTGCATTTC ATCCTGGAAT CTCCCCACAT CGTGGTTGAT TTTTTAAAAA 001360
001361 AATGTACACA GTAAATTTCA CTTAGGTTTA TAATACATTA TACCTTAGTT AGAATAAATG TACCTTTTGT GAATGTGGAC 001440
001441 AAATGCATAG AGTCATGAAT CTACCACCAC AGTATCTTGC AAAACTGTTC TATTACCCTA AAAATTGTCT TGTGTGATCC 001520
001521 CTTCGCAGTC AACCTCTTC
[back to top]